CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
golgi 1
plasma membrane 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH39685	Soybean	cytosol, peroxisome, plasma membrane, plastid	95.06	89.53
KRH07711	Soybean	plasma membrane	82.3	84.57
PGSC0003DMT400067464	Potato	plasma membrane	77.78	80.77
Solyc08g078100.1.1	Tomato	plasma membrane	77.16	80.13
PGSC0003DMT400047497	Potato	plasma membrane	75.51	78.25
VIT_02s0033g01310.t01	Wine grape	plasma membrane	74.49	75.26
KRG90652	Soybean	plasma membrane	69.75	72.75
GSMUA_Achr4P11590_001	Banana	plasma membrane	46.5	72.2
AT1G31830.1	Thale cress	golgi, mitochondrion, plasma membrane	73.05	71.72
GSMUA_Achr9P23200_001	Banana	plasma membrane	45.68	71.38
CDY12285	Canola	golgi, peroxisome, plasma membrane, plastid	73.05	71.29
Bra023210.1-P	Field mustard	golgi, peroxisome, plasma membrane, plastid	72.84	71.08
Solyc08g005540.1.1	Tomato	cytosol, peroxisome, plasma membrane	77.37	70.94
CDY63076	Canola	endoplasmic reticulum, plasma membrane, vacuole	54.73	70.93
VIT_02s0033g01320.t01	Wine grape	plasma membrane	68.93	70.82
Solyc08g075710.2.1	Tomato	plastid	76.54	69.66
Zm00001d024516_P001	Maize	plasma membrane	70.58	69.57
EES13409	Sorghum	plasma membrane	70.37	69.37
GSMUA_Achr1P27820_001	Banana	plasma membrane	60.91	68.52
TraesCS5D01G028100.1	Wheat	plasma membrane	69.14	67.88
TraesCS5A01G022700.1	Wheat	mitochondrion, plasma membrane	69.14	67.88
AT5G05630.1	Thale cress	plasma membrane	68.11	67.55
TraesCS5B01G019600.1	Wheat	mitochondrion, plasma membrane	68.72	67.47
TraesCS6D01G245700.1	Wheat	plasma membrane	68.93	67.27
HORVU5Hr1G006170.3	Barley	golgi, plasma membrane	68.72	66.27
Bra023209.1-P	Field mustard	plasma membrane	61.11	65.71
AT1G31820.1	Thale cress	plasma membrane	65.02	65.56
CDX98852	Canola	plasma membrane, plastid	65.84	65.44
CDX70141	Canola	plasma membrane, plastid	65.02	64.89
KRH36101	Soybean	plasma membrane	35.8	64.68
CDY12286	Canola	plasma membrane	51.23	63.68
Os02t0700500-01	Rice	cytosol, peroxisome, plasma membrane	69.34	63.47
Bra009122.1-P	Field mustard	plasma membrane	63.99	63.34
Os03t0576900-01	Rice	plastid	71.6	63.27
TraesCS6A01G269200.2	Wheat	plasma membrane	68.72	63.26
Zm00001d017728_P001	Maize	plasma membrane	68.11	63.05
TraesCS6B01G296500.2	Wheat	plasma membrane	68.52	62.71
OQU85562	Sorghum	peroxisome, plasma membrane, vacuole	69.14	62.45
HORVU6Hr1G068230.1	Barley	plastid	68.72	58.09
KRH77938	Soybean	plasma membrane	50.62	50.93
KRH42817	Soybean	plasma membrane	44.24	44.51
KRH58913	Soybean	plasma membrane	43.83	44.19
KRH57856	Soybean	cytosol	21.6	43.57
KRH16786	Soybean	plasma membrane	42.8	43.24
KRH72395	Soybean	plasma membrane	41.56	42.98
KRH45451	Soybean	plasma membrane	15.02	33.64

Protein Annotations

Gene3D:1.20.1740.10	EntrezGene:100813355	MapMan:24.2.3.5.1	InterPro:AA/rel_permease1	EMBL:ACUP02000610	EnsemblPlantsGene:GLYMA_01G150200
GO:GO:0003333	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0005887	GO:GO:0006810	GO:GO:0008150	GO:GO:0015171	GO:GO:0015179	GO:GO:0015297
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	GO:GO:1902475	UniProt:I1J840
EnsemblPlants:KRH76400	ProteinID:KRH76400	ProteinID:KRH76400.1	PFAM:PF13520	PIRSF:PIRSF006060	PANTHER:PTHR11785
PANTHER:PTHR11785:SF338	TMHMM:TMhelix	UniParc:UPI00023378DC	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:-:48718267..48720427

Molecular Weight (calculated)

53785.7 Da

IEP (calculated)

8.525

GRAVY (calculated)

0.556

Length

486 amino acids

Sequence
(BLAST)

001: MKLRIAAANR QASIKMGEFT GSGEYVTHGE LPSSRPNHSR KVTVLPLVFL IFYEVSGGPF GVEDTVHAAG PLLALIGFLL FPLIWSVPEA LITAEMGTMF
101: PENSGYVVWV SSALGPYWGF QQGWMKWLSG VIDNALYPVL FLDYLKSGIP ALGGGLPRVI ATWGLTIVLT YLNYRGMTIV GWVAVCLGVF SLLPFVVMGF
201: LSIPDLKPSR WTVTNLNDVN WNLYLNTLFW NLNYWDSIST LAGEVENPKK TLPKALFYAV ILVVLGYFFP LLIGTGAVPV NRELWTDGYF SDIALIIGGA
301: WLRWWLQAAA AMSNMGMFVA EMSSDAFQLL GMAERGMLPE FFGKRSRYGT PLIGILFSAS GVILLSWLSF QEIVAAENFL YCFGMILEFI AFILLRIKHP
401: NASRPYKIPG GTAGAIIMCI PPTILIGVVL FFSSLKVMVI SLIAMAIGLV MQPCLKLVEK KRWMKFSYSS ELPDFGNQEG NRSLVH

Best Arabidopsis Sequence Match ( AT1G31830.1 )
(BLAST)

001: MQKRRIITVN PSASIEMSQY ENNEVPYSSV GADEVPSSPP KATDKIRKVS MLPLVFLIFY EVSGGPFGVE DSVNAAGPLL ALLGFVIFPF IWSIPEALIT
101: AEMGTMYPEN GGYVVWVSSA LGPFWGFQQG WMKWLSGVID NALYPVLFLD YLKSGVPALG SGLPRVASIL VLTILLTYLN YRGLTIVGWV AVLMGVFSIL
201: PFAVMGLISI PQLEPSRWLV MDLGNVNWNL YLNTLFWNLN YWDSISTLAG EVENPNHTLP KALFYGVILV ACSYIFPLLA GIGAIPLERE KWTDGYFSDV
301: AKALGGAWLR WWVQAAAATS NMGMFIAEMS SDSFQLLGMA ERGMLPEFFA KRSRYGTPLL GILFSASGVV LLSWLSFQEI VAAENLLYCV GMILEFIAFV
401: RMRMKHPAAS RPYKIPIGTT GSILMCIPPT ILICAVVALS SLKVAAVSIV MMIIGFLIHP LLNHMDRKRW VKFSISSDLP DLQQQTREYE ETLIR

Arabidopsis Description

Probable polyamine transporter At1g31830 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S5]
SUBAcon: [golgi,plasma membrane,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.