CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plastid 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH76400	Soybean	plasma membrane	89.53	95.06
KRH07711	Soybean	plasma membrane	76.36	83.3
PGSC0003DMT400067464	Potato	plasma membrane	72.67	80.13
Solyc08g078100.1.1	Tomato	plasma membrane	72.09	79.49
PGSC0003DMT400047497	Potato	plasma membrane	70.16	77.19
VIT_02s0033g01310.t01	Wine grape	plasma membrane	69.57	74.64
KRG90652	Soybean	plasma membrane	65.5	72.53
GSMUA_Achr4P11590_001	Banana	plasma membrane	43.99	72.52
AT1G31830.1	Thale cress	golgi, mitochondrion, plasma membrane	69.38	72.32
GSMUA_Achr9P23200_001	Banana	plasma membrane	43.22	71.7
CDY12285	Canola	golgi, peroxisome, plasma membrane, plastid	68.99	71.49
CDY63076	Canola	endoplasmic reticulum, plasma membrane, vacuole	51.94	71.47
Bra023210.1-P	Field mustard	golgi, peroxisome, plasma membrane, plastid	68.8	71.29
Solyc08g005540.1.1	Tomato	cytosol, peroxisome, plasma membrane	72.87	70.94
Solyc08g075710.2.1	Tomato	plastid	73.06	70.6
VIT_02s0033g01320.t01	Wine grape	plasma membrane	64.53	70.4
Zm00001d024516_P001	Maize	plasma membrane	66.28	69.37
EES13409	Sorghum	plasma membrane	65.89	68.97
GSMUA_Achr1P27820_001	Banana	plasma membrane	57.36	68.52
TraesCS5A01G022700.1	Wheat	mitochondrion, plasma membrane	64.92	67.68
TraesCS5D01G028100.1	Wheat	plasma membrane	64.53	67.27
TraesCS5B01G019600.1	Wheat	mitochondrion, plasma membrane	64.53	67.27
TraesCS6D01G245700.1	Wheat	plasma membrane	64.92	67.27
AT5G05630.1	Thale cress	plasma membrane	63.37	66.73
HORVU5Hr1G006170.3	Barley	golgi, plasma membrane	64.73	66.27
Bra023209.1-P	Field mustard	plasma membrane	57.56	65.71
AT1G31820.1	Thale cress	plasma membrane	61.24	65.56
CDX98852	Canola	plasma membrane, plastid	61.63	65.03
CDY12286	Canola	plasma membrane	49.03	64.71
CDX70141	Canola	plasma membrane, plastid	61.05	64.68
Os02t0700500-01	Rice	cytosol, peroxisome, plasma membrane	65.89	64.03
Zm00001d017728_P001	Maize	plasma membrane	64.73	63.62
TraesCS6A01G269200.2	Wheat	plasma membrane	64.73	63.26
KRH36101	Soybean	plasma membrane	32.95	63.2
Bra009122.1-P	Field mustard	plasma membrane	60.08	63.14
Os03t0576900-01	Rice	plastid	67.25	63.09
OQU85562	Sorghum	peroxisome, plasma membrane, vacuole	65.7	63.01
TraesCS6B01G296500.2	Wheat	plasma membrane	64.53	62.71
HORVU6Hr1G068230.1	Barley	plastid	65.12	58.43
KRH77938	Soybean	plasma membrane	47.29	50.52
KRH42817	Soybean	plasma membrane	41.86	44.72
KRH58913	Soybean	plasma membrane	41.28	44.19
KRH57856	Soybean	cytosol	20.35	43.57
KRH16786	Soybean	plasma membrane	40.5	43.45
KRH72395	Soybean	plasma membrane	39.53	43.4
KRH45451	Soybean	plasma membrane	14.15	33.64

Protein Annotations

Gene3D:1.20.1740.10	EntrezGene:100816567	MapMan:24.2.3.5.1	UniProt:A0A0R0IHB2	InterPro:AA/rel_permease1	EMBL:ACUP02005952
EnsemblPlantsGene:GLYMA_09G214300	GO:GO:0003333	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0008150	GO:GO:0015171	GO:GO:0015179
GO:GO:0015297	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	GO:GO:1902475
EnsemblPlants:KRH39685	ProteinID:KRH39685	ProteinID:KRH39685.1	PFAM:PF13520	PIRSF:PIRSF006060	PANTHER:PTHR11785
PANTHER:PTHR11785:SF338	TMHMM:TMhelix	UniParc:UPI0003DE8868	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr9:-:43763390..43767488

Molecular Weight (calculated)

57064.1 Da

IEP (calculated)

6.519

GRAVY (calculated)

0.454

Length

516 amino acids

Sequence
(BLAST)

001: MIAADSSSPQ EPQLASQAPQ VSDTNKNHNQ EKLRIAAANK QASIEMGEFT GSGEYVTIGE FPSSRTNHSR KVSVLPLVFL IFYEVSGGPF GVEDTVHAAG
101: PFLALLGFLL FPLIWSVPEA LITAEMGTMF PENSGYVVWV SSALGPFWGF QQGWMKWLSG VIDNALYPVL FLDYLKSGIP ALGGGFPRVV ATWGLTIVLT
201: YLNYRGMTIV GWVAVCLGVF SLLPFVVMGF LAIPDLKPSR WTVTNPNDIN WNLYLNTLFW NLNYWDSIST LAGEVENPKK TLPKALFYAV ILVVLGYFFP
301: LLIGTGAVPV NRELWTDGYF SDIALIIGGA WLRWWLQAAA AMSNMGMFVA EMSSDAFQLL GMAERGMLPE FFSKRSRYGT PLIGILFSAS GVILLSWLSF
401: QEIVAAENFL YCFGMILEFI AFILLRIKHP NASRPYKIPG GTAGAIIMCI PPTILIGVVL FFSTLKVMVV SLIAMAIGLL MQPCLKFVEK KRWMKFSHSS
501: ELPDFGNQED TRTLVH

Best Arabidopsis Sequence Match ( AT1G31830.1 )
(BLAST)

001: MQKRRIITVN PSASIEMSQY ENNEVPYSSV GADEVPSSPP KATDKIRKVS MLPLVFLIFY EVSGGPFGVE DSVNAAGPLL ALLGFVIFPF IWSIPEALIT
101: AEMGTMYPEN GGYVVWVSSA LGPFWGFQQG WMKWLSGVID NALYPVLFLD YLKSGVPALG SGLPRVASIL VLTILLTYLN YRGLTIVGWV AVLMGVFSIL
201: PFAVMGLISI PQLEPSRWLV MDLGNVNWNL YLNTLFWNLN YWDSISTLAG EVENPNHTLP KALFYGVILV ACSYIFPLLA GIGAIPLERE KWTDGYFSDV
301: AKALGGAWLR WWVQAAAATS NMGMFIAEMS SDSFQLLGMA ERGMLPEFFA KRSRYGTPLL GILFSASGVV LLSWLSFQEI VAAENLLYCV GMILEFIAFV
401: RMRMKHPAAS RPYKIPIGTT GSILMCIPPT ILICAVVALS SLKVAAVSIV MMIIGFLIHP LLNHMDRKRW VKFSISSDLP DLQQQTREYE ETLIR

Arabidopsis Description

Probable polyamine transporter At1g31830 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S5]
SUBAcon: [mitochondrion,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.