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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 7
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX97989 Canola endoplasmic reticulum, extracellular, plasma membrane 100.0 100.0
AT1G13380.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 89.42 89.89
KRH45268 Soybean extracellular 76.72 75.92
VIT_01s0011g03560.t01 Wine grape extracellular 75.66 75.26
Solyc05g009330.2.1 Tomato plasma membrane 75.66 75.26
KRH75370 Soybean extracellular 74.6 73.82
PGSC0003DMT400037709 Potato plasma membrane 73.55 73.16
GSMUA_Achr1P20960_001 Banana endoplasmic reticulum, plasma membrane 71.96 72.34
HORVU7Hr1G083180.1 Barley extracellular 67.72 67.02
Os09t0281300-02 Rice endoplasmic reticulum, plasma membrane 67.2 66.84
TraesCS7D01G345300.1 Wheat extracellular 67.2 66.49
TraesCS7B01G249300.1 Wheat extracellular 67.2 66.49
TraesCS7A01G338100.1 Wheat extracellular 67.2 66.49
EER88397 Sorghum endoplasmic reticulum, plasma membrane, vacuole 65.61 65.26
GSMUA_Achr11P... Banana extracellular, plasma membrane 61.9 56.25
Zm00001d037463_P001 Maize plasma membrane 65.08 51.25
Bra026350.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 42.33 46.24
Bra019050.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 40.74 44.51
Bra027240.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 40.74 44.0
Bra030968.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 33.86 43.84
Bra019000.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 40.21 43.43
Bra004290.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 40.21 38.19
Bra031458.1-P Field mustard extracellular 16.93 37.21
Protein Annotations
EnsemblPlants:Bra019828.1EnsemblPlants:Bra019828.1-PEnsemblPlantsGene:Bra019828GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:DUF1218PANTHER:PTHR31769PANTHER:PTHR31769:SF5PFAM:PF06749SEG:segSignalP:SignalP-TM
TMHMM:TMhelixUniParc:UPI000253EBE8UniProt:M4DTI5MapMan:35.2::
Description
AT1G13380 (E=1e-087) | unknown protein
Coordinates
chrA06:+:4123992..4124953
Molecular Weight (calculated)
20281.7 Da
IEP (calculated)
9.178
GRAVY (calculated)
0.476
Length
189 amino acids
Sequence
(BLAST)
001: MGEGKGSTLV FVLVIALCLV AFGFSIAAER RRSIGKSIQD PITNATYCVY SSDVATGYGV GAFLFLLSSE SLLMGVTKCM CFGRPLSPGS DRAWSIIYFI
101: SSWMTFLVAE ACLIAGATKN AYHTKYLSAQ AFSCESLRKG IFIAGAVFTV ATMILNVYYY FHFTKSVSSP PTHKANRSGS NIGMAGGYA
Best Arabidopsis Sequence Match ( AT1G13380.1 )
(BLAST)
001: MGEGKASTLV FILVVALSLV AFGFSIAAER RRSIGKSIQD PITNTTFCVY DSDVATGYGV GAFLFLLSSE SLLMSVTKCM CFGRPLAPGS DRAWSIIYFI
101: SSWMTFLVAE ACVIAGATKN AYHTKYLSSQ TFSCASLRKG IFIAGAVFIV ATMVLNVYYY MYFTKSVSSP PAHKANRSSS NIGMAGYA
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9FX59]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.