Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- golgi 5
- plasma membrane 8
- endoplasmic reticulum 6
- vacuole 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400037709 | Potato | plasma membrane | 96.84 | 96.84 |
| KRH45268 | Soybean | extracellular | 79.47 | 79.06 |
| KRH75370 | Soybean | extracellular | 77.89 | 77.49 |
| VIT_01s0011g03560.t01 | Wine grape | extracellular | 77.37 | 77.37 |
| Bra019828.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 75.26 | 75.66 |
| CDX97989 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 75.26 | 75.66 |
| AT1G13380.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 74.74 | 75.53 |
| GSMUA_Achr1P20960_001 | Banana | endoplasmic reticulum, plasma membrane | 72.11 | 72.87 |
| TraesCS7D01G345300.1 | Wheat | extracellular | 69.47 | 69.11 |
| TraesCS7B01G249300.1 | Wheat | extracellular | 69.47 | 69.11 |
| TraesCS7A01G338100.1 | Wheat | extracellular | 69.47 | 69.11 |
| HORVU7Hr1G083180.1 | Barley | extracellular | 68.42 | 68.06 |
| Os09t0281300-02 | Rice | endoplasmic reticulum, plasma membrane | 67.89 | 67.89 |
| EER88397 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 67.89 | 67.89 |
| CDY19370 | Canola | plasma membrane, plastid | 75.26 | 57.89 |
| GSMUA_Achr11P... | Banana | extracellular, plasma membrane | 62.63 | 57.21 |
| Zm00001d037463_P001 | Maize | plasma membrane | 67.37 | 53.33 |
| Solyc02g078630.2.1 | Tomato | extracellular, plasma membrane, vacuole | 47.89 | 50.0 |
| Solyc12g013650.1.1 | Tomato | extracellular, plasma membrane, vacuole | 47.37 | 48.39 |
| Solyc07g063340.2.1 | Tomato | nucleus | 45.79 | 46.77 |
| Solyc05g008900.2.1 | Tomato | extracellular | 44.74 | 43.81 |
Protein Annotations
| EnsemblPlants:Solyc05g009330.2.1 | EnsemblPlantsGene:Solyc05g009330.2 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:DUF1218 |
| PANTHER:PTHR31769 | PANTHER:PTHR31769:SF5 | PFAM:PF06749 | SEG:seg | SignalP:SignalP-TM | TMHMM:TMhelix |
| UniParc:UPI0002766A61 | UniProt:K4BXA7 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr5:-:3477308..3482473
Molecular Weight (calculated)
20768.3 Da
IEP (calculated)
9.150
GRAVY (calculated)
0.414
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEGRGSSLV HLLVIILSLV AFGFAIAAER RRSTGTLHDD TITNRTYCVY TSDVATGYGV GAFLFLLSGE ALLMGVTKCM CFGRPLSPGS NRAWTIIYFV
101: SSWLTFLVAE ACVIAGAKQN AYHTKYRDML LAENFSCETL RKGVFVAGAV FIVATMILNV YFYMYFTKAT TQPAHKTNRT SSNIGMAGYA
101: SSWLTFLVAE ACVIAGAKQN AYHTKYRDML LAENFSCETL RKGVFVAGAV FIVATMILNV YFYMYFTKAT TQPAHKTNRT SSNIGMAGYA
001: MGEGKASTLV FILVVALSLV AFGFSIAAER RRSIGKSIQD PITNTTFCVY DSDVATGYGV GAFLFLLSSE SLLMSVTKCM CFGRPLAPGS DRAWSIIYFI
101: SSWMTFLVAE ACVIAGATKN AYHTKYLSSQ TFSCASLRKG IFIAGAVFIV ATMVLNVYYY MYFTKSVSSP PAHKANRSSS NIGMAGYA
101: SSWMTFLVAE ACVIAGATKN AYHTKYLSSQ TFSCASLRKG IFIAGAVFIV ATMVLNVYYY MYFTKSVSSP PAHKANRSSS NIGMAGYA
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9FX59]
SUBAcon: [plasma membrane,endoplasmic reticulum,vacuole]
SUBAcon: [plasma membrane,endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.