Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- golgi 5
- endoplasmic reticulum 6
- plasma membrane 5
- vacuole 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97989 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 89.89 | 89.42 |
| Bra019828.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 89.89 | 89.42 |
| Solyc05g009330.2.1 | Tomato | plasma membrane | 75.53 | 74.74 |
| KRH45268 | Soybean | extracellular | 75.53 | 74.35 |
| VIT_01s0011g03560.t01 | Wine grape | extracellular | 75.0 | 74.21 |
| PGSC0003DMT400037709 | Potato | plasma membrane | 73.4 | 72.63 |
| KRH75370 | Soybean | extracellular | 73.4 | 72.25 |
| GSMUA_Achr1P20960_001 | Banana | endoplasmic reticulum, plasma membrane | 71.28 | 71.28 |
| CDY19370 | Canola | plasma membrane, plastid | 90.43 | 68.83 |
| Os09t0281300-02 | Rice | endoplasmic reticulum, plasma membrane | 68.62 | 67.89 |
| HORVU7Hr1G083180.1 | Barley | extracellular | 68.09 | 67.02 |
| TraesCS7A01G338100.1 | Wheat | extracellular | 67.55 | 66.49 |
| TraesCS7B01G249300.1 | Wheat | extracellular | 67.55 | 66.49 |
| TraesCS7D01G345300.1 | Wheat | extracellular | 67.55 | 66.49 |
| EER88397 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 67.02 | 66.32 |
| GSMUA_Achr11P... | Banana | extracellular, plasma membrane | 61.17 | 55.29 |
| Zm00001d037463_P001 | Maize | plasma membrane | 65.43 | 51.25 |
| AT4G27435.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 41.49 | 45.09 |
| AT3G15480.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 38.83 | 41.71 |
| AT1G61065.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 39.89 | 41.67 |
| AT1G52910.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 38.3 | 41.14 |
| AT1G68220.1 | Thale cress | extracellular | 38.3 | 35.82 |
Protein Annotations
| MapMan:35.2 | EntrezGene:837898 | UniProt:A0A178WKX4 | ProteinID:AAG09560.1 | ProteinID:AEE29009.1 | ArrayExpress:AT1G13380 |
| EnsemblPlantsGene:AT1G13380 | RefSeq:AT1G13380 | TAIR:AT1G13380 | RefSeq:AT1G13380-TAIR-G | EnsemblPlants:AT1G13380.1 | TAIR:AT1G13380.1 |
| EMBL:AY088291 | EMBL:AY136444 | EMBL:BT000232 | InterPro:DUF1218 | GO:GO:0005575 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | RefSeq:NP_563929.1 | ProteinID:OAP17782.1 | PFAM:PF06749 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR31769 |
| PANTHER:PTHR31769:SF5 | UniProt:Q9FX59 | TMHMM:TMhelix | UniParc:UPI00000AC172 | SEG:seg | : |
Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9FX59]
Coordinates
chr1:-:4588994..4590501
Molecular Weight (calculated)
20260.7 Da
IEP (calculated)
9.347
GRAVY (calculated)
0.526
Length
188 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEGKASTLV FILVVALSLV AFGFSIAAER RRSIGKSIQD PITNTTFCVY DSDVATGYGV GAFLFLLSSE SLLMSVTKCM CFGRPLAPGS DRAWSIIYFI
101: SSWMTFLVAE ACVIAGATKN AYHTKYLSSQ TFSCASLRKG IFIAGAVFIV ATMVLNVYYY MYFTKSVSSP PAHKANRSSS NIGMAGYA
101: SSWMTFLVAE ACVIAGATKN AYHTKYLSSQ TFSCASLRKG IFIAGAVFIV ATMVLNVYYY MYFTKSVSSP PAHKANRSSS NIGMAGYA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.