Factsheet for AT1G52910.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

endoplasmic reticulum 6
golgi 5
extracellular 6
vacuole 5
plasma membrane 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53808	Canola	endoplasmic reticulum, extracellular, vacuole	89.71	89.71
Bra019000.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	89.71	89.71
CDY26029	Canola	endoplasmic reticulum, extracellular, vacuole	89.14	89.14
Bra030968.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	72.0	86.3
CDY02534	Canola	endoplasmic reticulum, extracellular, vacuole	85.71	85.71
AT3G15480.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	81.71	81.71
AT4G27435.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	60.0	60.69
AT1G61065.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	53.14	51.67
EES11652	Sorghum	endoplasmic reticulum, extracellular, vacuole	48.57	46.45
Zm00001d026625_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	49.14	45.99
Os04t0678200-01	Rice	plasma membrane	46.86	44.81
TraesCS2A01G591700.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	45.14	44.13
TraesCS2B01G592000.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	45.71	43.48
TraesCS2D01G562500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	45.71	43.48
TraesCS2A01G591800.1	Wheat	extracellular	24.0	40.38
AT1G13380.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	41.14	38.3
AT1G68220.1	Thale cress	extracellular	41.14	35.82

Protein Annotations

MapMan:35.2	EntrezGene:841724	UniProt:A0A178W7B3	ProteinID:AAG52289.1	ProteinID:AEE32867.1	EMBL:AK175394
EMBL:AK175652	ArrayExpress:AT1G52910	EnsemblPlantsGene:AT1G52910	RefSeq:AT1G52910	TAIR:AT1G52910	RefSeq:AT1G52910-TAIR-G
EnsemblPlants:AT1G52910.1	TAIR:AT1G52910.1	Unigene:At.37503	EMBL:BT010633	InterPro:DUF1218	GO:GO:0005575
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	RefSeq:NP_564617.1	ProteinID:OAP13385.1	PFAM:PF06749
PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019
PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009052	PO:PO:0020030
PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PANTHER:PTHR31769	PANTHER:PTHR31769:SF39
UniProt:Q9C930	SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI00000A757D	SEG:seg	:

Description

At1g52910 [Source:UniProtKB/TrEMBL;Acc:Q9C930]

Coordinates

chr1:+:19708011..19709323

Molecular Weight (calculated)

19305.8 Da

IEP (calculated)

8.384

GRAVY (calculated)

0.577

Length

175 amino acids

Sequence
(BLAST)

001: MASKLVIIIV FILDLIAVGL AIAAEQRRSV GKVVPDGEKE FEHCEYGSDI ATSYGAGAFV LLFISQVIIM VASRCFCCGK ALKPGGSRAC GIMLFLICWV
101: FFLIAEVCLL AGSIRNAYHT TYRRMWNIEN PPSCEVIRKG VFAAGASFAL FTAIVSQFYY ISYSRARDGY QTPHY

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.