Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 6
- golgi 6
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY02534 | Canola | endoplasmic reticulum, extracellular, vacuole | 100.0 | 83.43 |
| Bra019000.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 97.26 | 81.14 |
| AT1G52910.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 86.3 | 72.0 |
| Bra027240.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 84.93 | 70.86 |
| Bra026350.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 61.64 | 52.02 |
| Bra019050.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 59.59 | 50.29 |
| EES11652 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 48.63 | 38.8 |
| Zm00001d026625_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 49.32 | 38.5 |
| Bra031458.1-P | Field mustard | extracellular | 22.6 | 38.37 |
| Os04t0678200-01 | Rice | plasma membrane | 46.58 | 37.16 |
| TraesCS2A01G591700.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 44.52 | 36.31 |
| TraesCS2B01G592000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 45.21 | 35.87 |
| TraesCS2D01G562500.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 44.52 | 35.33 |
| Bra019828.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 43.84 | 33.86 |
| Bra004290.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 43.15 | 31.66 |
| TraesCS2A01G591800.1 | Wheat | extracellular | 19.86 | 27.88 |
Protein Annotations
| EnsemblPlants:Bra030968.1 | EnsemblPlants:Bra030968.1-P | EnsemblPlantsGene:Bra030968 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:DUF1218 | PANTHER:PTHR31769 | PANTHER:PTHR31769:SF39 | PFAM:PF06749 | SEG:seg | SignalP:SignalP-TM |
| TMHMM:TMhelix | UniParc:UPI0002545817 | UniProt:M4EQ97 | MapMan:35.2 | : | : |
Description
AT3G15480 (E=2e-035) | unknown protein
Coordinates
chrA08:-:1204863..1205773
Molecular Weight (calculated)
16330.0 Da
IEP (calculated)
8.280
GRAVY (calculated)
0.474
Length
146 amino acids
Sequence
(BLAST)
(BLAST)
001: MASKLVIIIV FILDLIAVGL AIAAEQRRSV GKVVPDKEKV YEYCEYGSDI ATSYGAGAFV LLLTTQVIIM VFFLIAEICL LAASIRNAYH TKYRKMWNVD
101: EPPSCEVIRK GVFAAGASFA LFTAIVSQFY YVCYSRARDD YKNPPY
101: EPPSCEVIRK GVFAAGASFA LFTAIVSQFY YVCYSRARDD YKNPPY
001: MASKLVIIIV FILDLIAVGL AIAAEQRRSV GKVVPDGEKE FEHCEYGSDI ATSYGAGAFV LLFISQVIIM VASRCFCCGK ALKPGGSRAC GIMLFLICWV
101: FFLIAEVCLL AGSIRNAYHT TYRRMWNIEN PPSCEVIRKG VFAAGASFAL FTAIVSQFYY ISYSRARDGY QTPHY
101: FFLIAEVCLL AGSIRNAYHT TYRRMWNIEN PPSCEVIRKG VFAAGASFAL FTAIVSQFYY ISYSRARDGY QTPHY
Arabidopsis Description
At1g52910 [Source:UniProtKB/TrEMBL;Acc:Q9C930]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.