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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G591700.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 95.65 98.32
TraesCS2D01G562500.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 97.83 97.83
Zm00001d026625_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 71.74 70.59
EES11652 Sorghum endoplasmic reticulum, extracellular, vacuole 67.93 68.31
Os04t0678200-01 Rice plasma membrane 67.93 68.31
VIT_19s0014g03190.t01 Wine grape endoplasmic reticulum, plasma membrane, vacuole 52.72 52.43
VIT_00s0652g00020.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 50.0 50.83
Solyc07g063340.2.1 Tomato nucleus 51.09 50.54
PGSC0003DMT400032432 Potato endoplasmic reticulum, plasma membrane, vacuole 51.09 50.54
TraesCS3B01G450500.1 Wheat nucleus 50.54 50.27
KRH25778 Soybean extracellular 21.74 50.0
Solyc12g013650.1.1 Tomato extracellular, plasma membrane, vacuole 50.0 49.46
PGSC0003DMT400039574 Potato extracellular, plasma membrane, vacuole 49.46 48.92
TraesCS1B01G185600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 48.37 48.63
Solyc02g078630.2.1 Tomato extracellular, plasma membrane, vacuole 47.83 48.35
PGSC0003DMT400057628 Potato extracellular, plasma membrane, vacuole 47.28 47.8
KRH22133 Soybean extracellular, plasma membrane, vacuole 47.83 47.57
KRH49998 Soybean endoplasmic reticulum, extracellular, vacuole 47.28 47.54
Bra019000.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 45.11 47.43
CDY53808 Canola endoplasmic reticulum, extracellular, vacuole 45.11 47.43
AT1G61065.1 Thale cress endoplasmic reticulum, extracellular, vacuole 46.2 47.22
KRH27207 Soybean endoplasmic reticulum 47.28 47.03
CDY02534 Canola endoplasmic reticulum, extracellular, vacuole 44.57 46.86
CDY26029 Canola endoplasmic reticulum, extracellular, vacuole 44.57 46.86
CDY56821 Canola endoplasmic reticulum, extracellular, vacuole 44.02 46.29
AT3G15480.1 Thale cress endoplasmic reticulum, extracellular, vacuole 44.02 46.29
KRH55341 Soybean endoplasmic reticulum, extracellular, vacuole 23.37 46.24
AT1G52910.1 Thale cress endoplasmic reticulum, extracellular, vacuole 43.48 45.71
Bra027240.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 43.48 45.71
Bra019050.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 42.93 45.66
CDX89250 Canola endoplasmic reticulum, plasma membrane, vacuole 42.93 45.66
Bra030968.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 35.87 45.21
CDY29310 Canola endoplasmic reticulum, plasma membrane, vacuole 42.39 45.09
CDY29839 Canola endoplasmic reticulum, extracellular, vacuole 42.39 45.09
Bra026350.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 42.39 45.09
AT4G27435.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 41.85 44.51
CDX92831 Canola endoplasmic reticulum, extracellular, vacuole 41.85 44.51
CDX97672 Canola endoplasmic reticulum, plasma membrane, vacuole 41.85 44.0
CDY67483 Canola extracellular 42.93 43.89
CDY50209 Canola extracellular 42.93 43.89
KRH20498 Soybean endoplasmic reticulum, extracellular 43.48 43.72
Bra031458.1-P Field mustard extracellular 20.11 43.02
PGSC0003DMT400039595 Potato extracellular, mitochondrion 32.61 42.55
TraesCS7B01G249300.1 Wheat extracellular 42.39 40.84
KRH13651 Soybean endoplasmic reticulum, extracellular 24.46 40.18
CDY52490 Canola extracellular 18.48 39.53
Protein Annotations
EnsemblPlants:TraesCS2B01G592000.1EnsemblPlantsGene:TraesCS2B01G592000InterPro:DUF1218PANTHER:PTHR31769PANTHER:PTHR31769:SF18PFAM:PF06749
SEG:segSignalP:SignalP-TMTMHMM:TMhelixMapMan:35.2::
Description
No Description!
Coordinates
chr2B:+:777303839..777305629
Molecular Weight (calculated)
19787.6 Da
IEP (calculated)
9.264
GRAVY (calculated)
0.727
Length
184 amino acids
Sequence
(BLAST)
001: MASIVVIGLV LLLDILAFVL AIGAERRRST AQLGEAEPGG RRYCMYDTDA STWYGVGALA LLLVGQAVAM AASRCFCCGR ALSPGRWRFF SGLFFVLCWL
101: TFVIAEVCLL AGSVRNAYHT KYVSGYYDGG ALPCAMLRRG VFAAGAAFAF LTTLFVMLHY VFYSKARAAP PPIINGGGIG MTRI
Best Arabidopsis Sequence Match ( AT1G52910.1 )
(BLAST)
001: MASKLVIIIV FILDLIAVGL AIAAEQRRSV GKVVPDGEKE FEHCEYGSDI ATSYGAGAFV LLFISQVIIM VASRCFCCGK ALKPGGSRAC GIMLFLICWV
101: FFLIAEVCLL AGSIRNAYHT TYRRMWNIEN PPSCEVIRKG VFAAGASFAL FTAIVSQFYY ISYSRARDGY QTPHY
Arabidopsis Description
At1g52910 [Source:UniProtKB/TrEMBL;Acc:Q9C930]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.