Factsheet for VIT_19s0014g03190.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 6
plasma membrane 7
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0652g00020.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	69.19	70.72
EES11652	Sorghum	endoplasmic reticulum, extracellular, vacuole	60.54	61.2
Os04t0678200-01	Rice	plasma membrane	56.76	57.38
Zm00001d026625_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	57.3	56.68
TraesCS2A01G591700.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	52.43	54.19
TraesCS2D01G562500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	52.97	53.26
TraesCS2B01G592000.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	52.43	52.72
VIT_01s0011g03560.t01	Wine grape	extracellular	50.27	48.95
VIT_01s0011g04020.t01	Wine grape	extracellular	47.03	45.08
TraesCS2A01G591800.1	Wheat	extracellular	21.08	37.5

Protein Annotations

EntrezGene:100260721	wikigene:100260721	MapMan:35.2	ProteinID:CBI20341	ProteinID:CBI20341.3	InterPro:DUF1218
UniProt:E0CSP2	EMBL:FN595229	GO:GO:0003674	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005956	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0019538	GO:GO:0019887	GO:GO:0030234	GO:GO:0045859	EntrezGene:LOC100260721
wikigene:LOC100260721	PFAM:PF06749	PANTHER:PTHR31769	PANTHER:PTHR31769:SF39	SignalP:SignalP-TM	TIGR:TC51921
TMHMM:TMhelix	UniParc:UPI00015C7A78	ArrayExpress:VIT_19s0014g03190	EnsemblPlantsGene:VIT_19s0014g03190	EnsemblPlants:VIT_19s0014g03190.t01	unigene:Vvi.8783
RefSeq:XP_002284734	RefSeq:XP_002284734.1	RefSeq:XP_010644217.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr19:-:3331384..3333330

Molecular Weight (calculated)

19943.2 Da

IEP (calculated)

7.625

GRAVY (calculated)

0.569

Length

185 amino acids

Sequence
(BLAST)

001: MASTVILVVV LIFDVIAFGL AVAAEQRRST AQVVTDSEDN YKYCVYDSDI STGLGVGALL FLFASQAIIM VASRCFCCGK ALNPGGSRAW AVILFITCWV
101: TFLIAEICLL AGSVRNAYHT KYRTIFSEDP PSCETLRKGV FGAGAAFTFF TAILSELYYV CYSKARGSFP AYGGRETGVG MGTYS

Best Arabidopsis Sequence Match ( AT3G15480.1 )
(BLAST)

001: MASKLVVIIV FILDLIAVGL AIAAEQRRSV GKVETDRDKQ YDYCVYGTDI ATSYGAGAFV LLFVSQVLIM AASRCFCCGK SLNPGGSRAC AIILFLICWV
101: FFLIAEMCLL AASIRNAYHT QYRKMWKVED PPSCEVIRKG VFAAGAAFTL FTAIVSQFYY VCYSRARDAY QNPSY

Arabidopsis Description

AT3g15480/MJK13_14 [Source:UniProtKB/TrEMBL;Acc:Q9LDK1]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.