Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH45268 | Soybean | extracellular | 82.63 | 82.2 |
| KRH75370 | Soybean | extracellular | 82.63 | 82.2 |
| GSMUA_Achr1P20960_001 | Banana | endoplasmic reticulum, plasma membrane | 78.95 | 79.79 |
| Solyc05g009330.2.1 | Tomato | plasma membrane | 77.37 | 77.37 |
| PGSC0003DMT400037709 | Potato | plasma membrane | 76.32 | 76.32 |
| Bra019828.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 75.26 | 75.66 |
| CDX97989 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 75.26 | 75.66 |
| AT1G13380.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 74.21 | 75.0 |
| EER88397 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 71.58 | 71.58 |
| TraesCS7D01G345300.1 | Wheat | extracellular | 71.58 | 71.2 |
| TraesCS7B01G249300.1 | Wheat | extracellular | 71.58 | 71.2 |
| TraesCS7A01G338100.1 | Wheat | extracellular | 71.58 | 71.2 |
| HORVU7Hr1G083180.1 | Barley | extracellular | 71.05 | 70.68 |
| Os09t0281300-02 | Rice | endoplasmic reticulum, plasma membrane | 70.53 | 70.53 |
| GSMUA_Achr11P... | Banana | extracellular, plasma membrane | 71.05 | 64.9 |
| Zm00001d037463_P001 | Maize | plasma membrane | 74.21 | 58.75 |
| CDY19370 | Canola | plasma membrane, plastid | 75.26 | 57.89 |
| VIT_19s0014g03190.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 48.95 | 50.27 |
| VIT_00s0652g00020.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 47.37 | 49.72 |
| VIT_01s0011g04020.t01 | Wine grape | extracellular | 43.68 | 43.01 |
Protein Annotations
| EntrezGene:100243921 | wikigene:100243921 | MapMan:35.2 | ProteinID:CBI27017 | ProteinID:CBI27017.3 | UniProt:D7T946 |
| InterPro:DUF1218 | EMBL:FN595752 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | EntrezGene:LOC100243921 |
| wikigene:LOC100243921 | PFAM:PF06749 | PANTHER:PTHR31769 | PANTHER:PTHR31769:SF5 | SignalP:SignalP-noTM | TMHMM:TMhelix |
| UniParc:UPI00015C7F3A | ArrayExpress:VIT_01s0011g03560 | EnsemblPlantsGene:VIT_01s0011g03560 | EnsemblPlants:VIT_01s0011g03560.t01 | unigene:Vvi.1700 | RefSeq:XP_002282642 |
| RefSeq:XP_002282642.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr1:-:3223281..3227712
Molecular Weight (calculated)
20577.1 Da
IEP (calculated)
9.471
GRAVY (calculated)
0.441
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEGKGSTLV HLVVVVLSLV AFGFAVAAER RRSVGTIVTD DRNATYCVYN SDVATGYGVG GFLFLLTSES LLMGVTKCMC FGRPLAPGGN RAWSIIYFVS
101: SWMTFLVAEA CLIAGATKNA YHTKYRGMIY AQNFSCETLR KGVFIAGAVF VVATMILNVY YYMYFSKATD TQAVRKANRA SSTVGMTGYA
101: SWMTFLVAEA CLIAGATKNA YHTKYRGMIY AQNFSCETLR KGVFIAGAVF VVATMILNVY YYMYFSKATD TQAVRKANRA SSTVGMTGYA
001: MGEGKASTLV FILVVALSLV AFGFSIAAER RRSIGKSIQD PITNTTFCVY DSDVATGYGV GAFLFLLSSE SLLMSVTKCM CFGRPLAPGS DRAWSIIYFI
101: SSWMTFLVAE ACVIAGATKN AYHTKYLSSQ TFSCASLRKG IFIAGAVFIV ATMVLNVYYY MYFTKSVSSP PAHKANRSSS NIGMAGYA
101: SSWMTFLVAE ACVIAGATKN AYHTKYLSSQ TFSCASLRKG IFIAGAVFIV ATMVLNVYYY MYFTKSVSSP PAHKANRSSS NIGMAGYA
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9FX59]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.