CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os09t0281300-02	Rice	endoplasmic reticulum, plasma membrane	86.32	86.32
TraesCS7B01G249300.1	Wheat	extracellular	82.11	81.68
HORVU7Hr1G083180.1	Barley	extracellular	82.11	81.68
TraesCS7D01G345300.1	Wheat	extracellular	81.58	81.15
TraesCS7A01G338100.1	Wheat	extracellular	81.58	81.15
GSMUA_Achr1P20960_001	Banana	endoplasmic reticulum, plasma membrane	76.84	77.66
Zm00001d037463_P001	Maize	plasma membrane	94.74	75.0
VIT_01s0011g03560.t01	Wine grape	extracellular	71.58	71.58
KRH45268	Soybean	extracellular	68.42	68.06
Solyc05g009330.2.1	Tomato	plasma membrane	67.89	67.89
KRH75370	Soybean	extracellular	67.89	67.54
AT1G13380.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	66.32	67.02
PGSC0003DMT400037709	Potato	plasma membrane	66.84	66.84
CDX97989	Canola	endoplasmic reticulum, extracellular, plasma membrane	65.26	65.61
Bra019828.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	65.26	65.61
GSMUA_Achr11P...	Banana	extracellular, plasma membrane	67.37	61.54
CDY19370	Canola	plasma membrane, plastid	65.79	50.61
EER98474	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	45.79	47.03
OQU91983	Sorghum	extracellular	18.95	43.9
EES11652	Sorghum	endoplasmic reticulum, extracellular, vacuole	41.05	42.62
EES14816	Sorghum	plasma membrane	40.0	38.19
EER94009	Sorghum	endoplasmic reticulum, plasma membrane	36.84	37.23

Protein Annotations

EnsemblPlants:EER88397	EnsemblPlantsGene:SORBI_3010G144900	EntrezGene:8085359	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:DUF1218	PANTHER:PTHR31769	PANTHER:PTHR31769:SF5	PFAM:PF06749	ProteinID:EER88397	ProteinID:EER88397.1
RefSeq:XP_002437030.1	SEG:seg	SignalP:SignalP-TM	TMHMM:TMhelix	unigene:Sbi.6665	UniParc:UPI0001A890AA
UniProt:C5Z336	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:40200841..40209487

Molecular Weight (calculated)

20353.8 Da

IEP (calculated)

9.157

GRAVY (calculated)

0.529

Length

190 amino acids

Sequence
(BLAST)

001: MGNTGSSSIL VHILVIAICL TAFGFAIAAE RRRSTGSIVT DSSNTTFCVY DSDIATGYGV GAFLFLLSGH SLLMGVTKCM CFGAPLAPGG SRAWSIIYFT
101: SSWITFAVAE ACLIAGATKN AYHTKYKDMV YAGNWTCQSL RKGVFIAGAV FVVFTMILDV YFYMYYSKAT SQAAKRISKT TPSVGMTGYA

Best Arabidopsis Sequence Match ( AT1G13380.1 )
(BLAST)

001: MGEGKASTLV FILVVALSLV AFGFSIAAER RRSIGKSIQD PITNTTFCVY DSDVATGYGV GAFLFLLSSE SLLMSVTKCM CFGRPLAPGS DRAWSIIYFI
101: SSWMTFLVAE ACVIAGATKN AYHTKYLSSQ TFSCASLRKG IFIAGAVFIV ATMVLNVYYY MYFTKSVSSP PAHKANRSSS NIGMAGYA

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9FX59]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.