CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 6
plasma membrane 7
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d005394_P001	Maize	endoplasmic reticulum, extracellular, vacuole	98.38	98.38
Zm00001d019597_P001	Maize	plasma membrane	95.68	97.25
TraesCS3B01G450500.1	Wheat	nucleus	85.41	85.41
Os07t0462200-01	Rice	plasma membrane	84.86	84.86
HORVU3Hr1G092420.1	Barley	endoplasmic reticulum, extracellular, vacuole	84.32	84.32
TraesCS3D01G411100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	84.32	83.42
TraesCS3A01G415300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	84.32	83.42
HORVU3Hr1G009130.2	Barley	cytosol, extracellular	38.92	82.76
OQU91983	Sorghum	extracellular	33.51	75.61
HORVU2Hr1G083540.5	Barley	endoplasmic reticulum, extracellular, vacuole	47.03	73.73
GSMUA_Achr5P12000_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	65.95	66.3
GSMUA_Achr4P29970_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	66.49	66.13
HORVU6Hr1G041520.3	Barley	endoplasmic reticulum, extracellular	43.78	65.85
HORVU7Hr1G051440.1	Barley	extracellular	32.43	64.52
EES11652	Sorghum	endoplasmic reticulum, extracellular, vacuole	56.22	56.83
HORVU4Hr1G054230.1	Barley	extracellular	35.14	54.17
EER94009	Sorghum	endoplasmic reticulum, plasma membrane	52.97	52.13
EER88397	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	47.03	45.79
EES14816	Sorghum	plasma membrane	43.78	40.7
GSMUA_Achr1P00070_001	Banana	plasma membrane	65.95	26.58

Protein Annotations

EnsemblPlants:EER98474	EnsemblPlantsGene:SORBI_3002G128800	EntrezGene:8061658	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:DUF1218	PANTHER:PTHR31769	PANTHER:PTHR31769:SF39	PFAM:PF06749	ProteinID:EER98474	ProteinID:EER98474.1
RefSeq:XP_002461953.1	SEG:seg	SignalP:SignalP-TM	TMHMM:TMhelix	unigene:Sbi.366	UniParc:UPI00018C71A1
UniProt:C5X5R8	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:17973175..17976081

Molecular Weight (calculated)

19525.7 Da

IEP (calculated)

8.255

GRAVY (calculated)

0.585

Length

185 amino acids

Sequence
(BLAST)

001: MASIIVQAVV ILLDVIAFGL GVAAEQRRSR ATVTPDAAKE YDFCVYDSDI ATGYGVGALL LLAAGQVVLM VASRCFCCGR GLKPGGSRAC ALILFLFTWV
101: TFLIAEACLL AGSVRNAYHT RYRGIFYGDS LSCETVRKGV FAAGAAFTFF TAILGEVYYL SYSKSRDAAG GAPYGGSSIG MGPYN

Best Arabidopsis Sequence Match ( AT3G15480.1 )
(BLAST)

001: MASKLVVIIV FILDLIAVGL AIAAEQRRSV GKVETDRDKQ YDYCVYGTDI ATSYGAGAFV LLFVSQVLIM AASRCFCCGK SLNPGGSRAC AIILFLICWV
101: FFLIAEMCLL AASIRNAYHT QYRKMWKVED PPSCEVIRKG VFAAGAAFTL FTAIVSQFYY VCYSRARDAY QNPSY

Arabidopsis Description

AT3g15480/MJK13_14 [Source:UniProtKB/TrEMBL;Acc:Q9LDK1]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.