Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 7
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d019597_P001 | Maize | plasma membrane | 85.41 | 86.81 |
| HORVU3Hr1G092420.1 | Barley | endoplasmic reticulum, extracellular, vacuole | 85.95 | 85.95 |
| Zm00001d005394_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 85.41 | 85.41 |
| HORVU3Hr1G009130.2 | Barley | cytosol, extracellular | 40.0 | 85.06 |
| EER98474 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 84.86 | 84.86 |
| TraesCS3B01G450500.1 | Wheat | nucleus | 84.32 | 84.32 |
| TraesCS3A01G415300.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 84.86 | 83.96 |
| TraesCS3D01G411100.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 84.32 | 83.42 |
| HORVU2Hr1G083540.5 | Barley | endoplasmic reticulum, extracellular, vacuole | 48.11 | 75.42 |
| GSMUA_Achr4P29970_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 70.27 | 69.89 |
| GSMUA_Achr5P12000_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 68.65 | 69.02 |
| HORVU7Hr1G051440.1 | Barley | extracellular | 34.59 | 68.82 |
| OQU91983 | Sorghum | extracellular | 30.27 | 68.29 |
| HORVU6Hr1G041520.3 | Barley | endoplasmic reticulum, extracellular | 44.86 | 67.48 |
| HORVU4Hr1G054230.1 | Barley | extracellular | 36.22 | 55.83 |
| Os10t0495900-01 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 55.14 | 55.74 |
| Os04t0678200-01 | Rice | plasma membrane | 52.43 | 53.01 |
| Os09t0281300-02 | Rice | endoplasmic reticulum, plasma membrane | 49.73 | 48.42 |
| Os08t0261100-01 | Rice | endoplasmic reticulum, extracellular, plasma membrane | 44.32 | 41.21 |
| GSMUA_Achr1P00070_001 | Banana | plasma membrane | 69.19 | 27.89 |
Protein Annotations
| EMBL:AK059964 | EnsemblPlants:Os07t0462200-01 | EnsemblPlantsGene:Os07g0462200 | EntrezGene:4343166 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:DUF1218 | PANTHER:PTHR31769 | PANTHER:PTHR31769:SF39 | PFAM:PF06749 | ProteinID:BAC84171.1 |
| ProteinID:BAF21494.1 | ProteinID:BAT01375.1 | RefSeq:XP_015644609.1 | SEG:seg | SignalP:SignalP-TM | TMHMM:TMhelix |
| UniParc:UPI00001BF5C7 | UniProt:Q6Z3C2 | MapMan:35.2 | : | : | : |
Description
Protein of unknown function DUF1218 family protein. (Os07t0462200-01)
Coordinates
chr7:-:16226697..16230667
Molecular Weight (calculated)
19554.8 Da
IEP (calculated)
8.254
GRAVY (calculated)
0.604
Length
185 amino acids
Sequence
(BLAST)
(BLAST)
001: MASIIVLASV LLLDVIAFGL AVAAEQRRSK ATVTPDSEKL YDYCVYDSDI ATGYGVGALL LLAAAQAVVM LASKCFCCGR GLKPGGSRAC ALILFLFAWL
101: TFLIAEACLM AGSIRNAYHT RYRGMFVGES VSCETVRKGV FAAGAAFTFF TAILSEFYYV SYSKSRDAAG GAPYGGSNIG MGTYS
101: TFLIAEACLM AGSIRNAYHT RYRGMFVGES VSCETVRKGV FAAGAAFTFF TAILSEFYYV SYSKSRDAAG GAPYGGSNIG MGTYS
001: MASKLVVIIV FILDLIAVGL AIAAEQRRSV GKVETDRDKQ YDYCVYGTDI ATSYGAGAFV LLFVSQVLIM AASRCFCCGK SLNPGGSRAC AIILFLICWV
101: FFLIAEMCLL AASIRNAYHT QYRKMWKVED PPSCEVIRKG VFAAGAAFTL FTAIVSQFYY VCYSRARDAY QNPSY
101: FFLIAEMCLL AASIRNAYHT QYRKMWKVED PPSCEVIRKG VFAAGAAFTL FTAIVSQFYY VCYSRARDAY QNPSY
Arabidopsis Description
AT3g15480/MJK13_14 [Source:UniProtKB/TrEMBL;Acc:Q9LDK1]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.