Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 7
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES11652 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 80.87 | 80.87 |
| Zm00001d026625_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 78.69 | 77.01 |
| TraesCS2A01G591700.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 67.76 | 69.27 |
| TraesCS2D01G562500.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 68.31 | 67.93 |
| TraesCS2B01G592000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 68.31 | 67.93 |
| VIT_19s0014g03190.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 57.38 | 56.76 |
| Bra019050.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 51.37 | 54.34 |
| CDX92831 | Canola | endoplasmic reticulum, extracellular, vacuole | 51.37 | 54.34 |
| VIT_00s0652g00020.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 53.55 | 54.14 |
| KRH49998 | Soybean | endoplasmic reticulum, extracellular, vacuole | 54.1 | 54.1 |
| Solyc07g063340.2.1 | Tomato | nucleus | 54.64 | 53.76 |
| CDX89250 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 50.82 | 53.76 |
| CDY29310 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 50.82 | 53.76 |
| CDY29839 | Canola | endoplasmic reticulum, extracellular, vacuole | 50.82 | 53.76 |
| AT4G27435.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 50.82 | 53.76 |
| KRH22133 | Soybean | extracellular, plasma membrane, vacuole | 54.1 | 53.51 |
| PGSC0003DMT400032432 | Potato | endoplasmic reticulum, plasma membrane, vacuole | 54.1 | 53.23 |
| Bra026350.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 50.27 | 53.18 |
| KRH27207 | Soybean | endoplasmic reticulum | 53.55 | 52.97 |
| TraesCS2A01G591800.1 | Wheat | extracellular | 30.05 | 52.88 |
| PGSC0003DMT400057628 | Potato | extracellular, plasma membrane, vacuole | 52.46 | 52.75 |
| Solyc02g078630.2.1 | Tomato | extracellular, plasma membrane, vacuole | 52.46 | 52.75 |
| KRH55341 | Soybean | endoplasmic reticulum, extracellular, vacuole | 26.78 | 52.69 |
| KRH25778 | Soybean | extracellular | 22.95 | 52.5 |
| Os07t0462200-01 | Rice | plasma membrane | 53.01 | 52.43 |
| PGSC0003DMT400039574 | Potato | extracellular, plasma membrane, vacuole | 52.46 | 51.61 |
| Solyc12g013650.1.1 | Tomato | extracellular, plasma membrane, vacuole | 51.91 | 51.08 |
| AT1G61065.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 49.18 | 50.0 |
| Bra027240.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 46.99 | 49.14 |
| KRH20498 | Soybean | endoplasmic reticulum, extracellular | 48.63 | 48.63 |
| CDY56821 | Canola | endoplasmic reticulum, extracellular, vacuole | 46.45 | 48.57 |
| CDY67483 | Canola | extracellular | 47.54 | 48.33 |
| CDY50209 | Canola | extracellular | 47.54 | 48.33 |
| AT3G15480.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 45.9 | 48.0 |
| Bra019000.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 45.9 | 48.0 |
| CDY53808 | Canola | endoplasmic reticulum, extracellular, vacuole | 45.9 | 48.0 |
| CDY26029 | Canola | endoplasmic reticulum, extracellular, vacuole | 45.9 | 48.0 |
| CDY02534 | Canola | endoplasmic reticulum, extracellular, vacuole | 45.36 | 47.43 |
| AT1G52910.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 44.81 | 46.86 |
| CDX97672 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 44.81 | 46.86 |
| Bra030968.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 37.16 | 46.58 |
| Os10t0495900-01 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 46.45 | 46.45 |
| Bra031458.1-P | Field mustard | extracellular | 20.77 | 44.19 |
| Os09t0281300-02 | Rice | endoplasmic reticulum, plasma membrane | 44.81 | 43.16 |
| PGSC0003DMT400039595 | Potato | extracellular, mitochondrion | 31.69 | 41.13 |
| CDY52490 | Canola | extracellular | 19.13 | 40.7 |
| KRH13651 | Soybean | endoplasmic reticulum, extracellular | 24.59 | 40.18 |
| Os08t0261100-01 | Rice | endoplasmic reticulum, extracellular, plasma membrane | 42.08 | 38.69 |
Protein Annotations
| EMBL:AK106193 | EnsemblPlants:Os04t0678200-01 | EnsemblPlantsGene:Os04g0678200 | EntrezGene:4337412 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:DUF1218 | PANTHER:PTHR31769 | PANTHER:PTHR31769:SF18 | PFAM:PF06749 | ProteinID:BAF16185.1 |
| ProteinID:BAS91644.1 | ProteinID:CAE05771.2 | ProteinID:EAZ32421.1 | RefSeq:XP_015637282.1 | SEG:seg | SignalP:SignalP-TM |
| TMHMM:TMhelix | UniParc:UPI00001B1745 | UniProt:Q7XKA9 | MapMan:35.2 | : | : |
Description
Protein of unknown function DUF1218 family protein. (Os04t0678200-01)
Coordinates
chr4:+:34642807..34644512
Molecular Weight (calculated)
19598.4 Da
IEP (calculated)
9.371
GRAVY (calculated)
0.841
Length
183 amino acids
Sequence
(BLAST)
(BLAST)
001: MASIILVVVV FVLDALAFVL AIGAEKRRST ATFSEDTSGR QYCVYSSDAA TGYGIGALLL LLAGQAVVMV VTRCFCCGRA LSPGRWRAFS GFCFIVCWFT
101: FVIAELCLLA GSVRNAYHTK YSTLVISGPP RCAMLRKGVF AAGAAFTFLT ALFAELHYLF FAKARHAAAV PPPIVGGIGM TRM
101: FVIAELCLLA GSVRNAYHTK YSTLVISGPP RCAMLRKGVF AAGAAFTFLT ALFAELHYLF FAKARHAAAV PPPIVGGIGM TRM
001: MASKIVSAIV FVFNLIAFGL AVAAEQRRST ARVVQDTEVQ YNYCVYDSDR ATGYGVGAFL FSVASQILIM LVSRCFCCGK PLKPGGSRAL ALILFIVSWM
101: FFLIAEICLL AGSVENAYHT KYRTMFMDNP PDCQTLRKGV FAAGASFVFF NAIVSQFYYF FYFSAAEASL SPY
101: FFLIAEICLL AGSVENAYHT KYRTMFMDNP PDCQTLRKGV FAAGASFVFF NAIVSQFYYF FYFSAAEASL SPY
Arabidopsis Description
At4g27438 [Source:UniProtKB/TrEMBL;Acc:Q940M6]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.