Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY67483 | Canola | extracellular | 100.0 | 100.0 |
| AT1G61065.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 84.44 | 84.44 |
| Solyc02g078630.2.1 | Tomato | extracellular, plasma membrane, vacuole | 65.0 | 64.29 |
| PGSC0003DMT400057628 | Potato | extracellular, plasma membrane, vacuole | 65.0 | 64.29 |
| VIT_00s0652g00020.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 63.89 | 63.54 |
| KRH49998 | Soybean | endoplasmic reticulum, extracellular, vacuole | 62.78 | 61.75 |
| KRH20498 | Soybean | endoplasmic reticulum, extracellular | 60.56 | 59.56 |
| CDY52490 | Canola | extracellular | 27.78 | 58.14 |
| CDY53808 | Canola | endoplasmic reticulum, extracellular, vacuole | 53.33 | 54.86 |
| CDY26029 | Canola | endoplasmic reticulum, extracellular, vacuole | 52.78 | 54.29 |
| CDX92831 | Canola | endoplasmic reticulum, extracellular, vacuole | 51.67 | 53.76 |
| CDY29310 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 51.67 | 53.76 |
| CDX89250 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 51.11 | 53.18 |
| CDY56821 | Canola | endoplasmic reticulum, extracellular, vacuole | 51.67 | 53.14 |
| CDY29839 | Canola | endoplasmic reticulum, extracellular, vacuole | 50.56 | 52.6 |
| CDY02534 | Canola | endoplasmic reticulum, extracellular, vacuole | 51.11 | 52.57 |
| KRH25778 | Soybean | extracellular | 23.33 | 52.5 |
| CDX97672 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 50.0 | 51.43 |
| KRH13651 | Soybean | endoplasmic reticulum, extracellular | 30.56 | 49.11 |
| Os04t0678200-01 | Rice | plasma membrane | 48.33 | 47.54 |
| EES11652 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 47.22 | 46.45 |
| Zm00001d026625_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 45.56 | 43.85 |
| TraesCS2A01G591700.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 43.33 | 43.58 |
| TraesCS2B01G592000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 43.89 | 42.93 |
| TraesCS2D01G562500.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 43.89 | 42.93 |
| CDX97989 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 39.44 | 37.57 |
| CDY01897 | Canola | extracellular | 40.0 | 36.18 |
| CDX96039 | Canola | extracellular | 40.0 | 36.18 |
| TraesCS2A01G591800.1 | Wheat | extracellular | 20.0 | 34.62 |
| CDY19370 | Canola | plasma membrane, plastid | 39.44 | 28.74 |
Protein Annotations
| EnsemblPlants:CDY50209 | EnsemblPlantsGene:GSBRNA2T00096158001 | GO:A0A078ILJ3 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:DUF1218 | PANTHER:PTHR31769 | PANTHER:PTHR31769:SF16 | PFAM:PF06749 | ProteinID:CDY50209 | ProteinID:CDY50209.1 |
| ProteinID:CDY67483.1 | SEG:seg | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI0004EBC5AA | UniProt:A0A078ILJ3 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaCnng18910DBnaCnng18910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ILJ3]
Coordinates
chrLK032890:+:54013..55330
Molecular Weight (calculated)
19769.3 Da
IEP (calculated)
8.565
GRAVY (calculated)
0.627
Length
180 amino acids
Sequence
(BLAST)
(BLAST)
001: MASVMLLFVV FVFDLIAFGL AVAAEQRRTT WQVVNESRDS SYCVYEKDIA TGLGIGSFLI LLASQLFMMV ASRCLCCGRA LTPSGSRSCA IPLFITTWVF
101: FFIAEVCLFA GSVQNSYHTK YRVYLGNTAP SCRSVRKGVF GAGAAFIILT GIVSELYYVC LTRAKDFEVP KDPGIRMSSL
101: FFIAEVCLFA GSVQNSYHTK YRVYLGNTAP SCRSVRKGVF GAGAAFIILT GIVSELYYVC LTRAKDFEVP KDPGIRMSSL
001: MASVLLLLLV FVFDLIAFGL AVAAEQRRTT WQISRESRDL SYCVYDKDIA TGLGVGSFLV LLASQLLIMV ASRCLCCGRA LTPSGSRSWA IFLFITTWVF
101: FFIAQVCLLA GSVRNAYHTK YRVYFGNTSP SCRSLRKGVF GAGAAFIVLT GIVSELYYVT LSRAKDFQPS RDPGIRMSSL
101: FFIAQVCLLA GSVRNAYHTK YRVYFGNTSP SCRSLRKGVF GAGAAFIVLT GIVSELYYVT LSRAKDFQPS RDPGIRMSSL
Arabidopsis Description
1,3-beta-glucan synthase component (DUF1218) [Source:UniProtKB/TrEMBL;Acc:Q8W576]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.