CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra027240.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	98.86	98.86
CDX97672	Canola	endoplasmic reticulum, plasma membrane, vacuole	93.14	93.14
AT3G15480.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	90.29	90.29
CDY53808	Canola	endoplasmic reticulum, extracellular, vacuole	86.29	86.29
CDY26029	Canola	endoplasmic reticulum, extracellular, vacuole	85.71	85.71
CDY02534	Canola	endoplasmic reticulum, extracellular, vacuole	82.86	82.86
CDX89250	Canola	endoplasmic reticulum, plasma membrane, vacuole	62.86	63.58
CDY29310	Canola	endoplasmic reticulum, plasma membrane, vacuole	62.86	63.58
CDX92831	Canola	endoplasmic reticulum, extracellular, vacuole	61.14	61.85
CDY29839	Canola	endoplasmic reticulum, extracellular, vacuole	60.57	61.27
CDY50209	Canola	extracellular	53.14	51.67
CDY67483	Canola	extracellular	53.14	51.67
Zm00001d026625_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	49.71	46.52
Os04t0678200-01	Rice	plasma membrane	48.57	46.45
EES11652	Sorghum	endoplasmic reticulum, extracellular, vacuole	48.0	45.9
TraesCS2A01G591700.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	46.29	45.25
TraesCS2D01G562500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	46.86	44.57
TraesCS2B01G592000.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	46.29	44.02
CDY52490	Canola	extracellular	20.0	40.7
TraesCS2A01G591800.1	Wheat	extracellular	24.0	40.38
CDX97989	Canola	endoplasmic reticulum, extracellular, plasma membrane	43.43	40.21
CDY01897	Canola	extracellular	41.71	36.68
CDX96039	Canola	extracellular	41.71	36.68
CDY19370	Canola	plasma membrane, plastid	44.0	31.17

Protein Annotations

EnsemblPlants:CDY56821	EnsemblPlantsGene:GSBRNA2T00020110001	GO:A0A078J0Y1	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:DUF1218	PANTHER:PTHR31769	PANTHER:PTHR31769:SF39	PFAM:PF06749	ProteinID:CDY56821	ProteinID:CDY56821.1
SEG:seg	SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI0001B63E1D	UniProt:A0A078J0Y1	MapMan:35.2

Description

BnaC05g37760DBnaC05g37760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J0Y1]

Coordinates

chrLK033521:+:1137..2480

Molecular Weight (calculated)

19330.7 Da

IEP (calculated)

8.303

GRAVY (calculated)

0.639

Length

175 amino acids

Sequence
(BLAST)

001: MASKLVVIIV FILDLIAVGL AIAAEQRRSV GKVVTDTEKT YEYCVYGTDI ATSYGAGAFL LLFISQVLIM SASRCFCCGK SLNPGGSRAC ALLLFLICWV
101: FFLVAEVCLL AASIRNAYHT QYRTMWNIEN PPSCEVIRRG VFAAGAAFTL FTAIVSQFYY VCYSRARDAY QNPSY

Best Arabidopsis Sequence Match ( AT3G15480.1 )
(BLAST)

001: MASKLVVIIV FILDLIAVGL AIAAEQRRSV GKVETDRDKQ YDYCVYGTDI ATSYGAGAFV LLFVSQVLIM AASRCFCCGK SLNPGGSRAC AIILFLICWV
101: FFLIAEMCLL AASIRNAYHT QYRKMWKVED PPSCEVIRKG VFAAGAAFTL FTAIVSQFYY VCYSRARDAY QNPSY

Arabidopsis Description

AT3g15480/MJK13_14 [Source:UniProtKB/TrEMBL;Acc:Q9LDK1]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.