Factsheet for Bra027240.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 6
golgi 5
plasma membrane 6
endoplasmic reticulum 6
vacuole 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY56821	Canola	endoplasmic reticulum, extracellular, vacuole	98.86	98.86
CDX97672	Canola	endoplasmic reticulum, plasma membrane, vacuole	94.29	94.29
AT3G15480.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	90.29	90.29
Bra019000.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	87.43	87.43
Bra030968.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	70.86	84.93
Bra026350.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	64.0	64.74
Bra019050.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	62.29	63.01
Os04t0678200-01	Rice	plasma membrane	49.14	46.99
EES11652	Sorghum	endoplasmic reticulum, extracellular, vacuole	48.57	46.45
Zm00001d026625_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	49.14	45.99
Bra031458.1-P	Field mustard	extracellular	22.29	45.35
TraesCS2A01G591700.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	45.71	44.69
TraesCS2B01G592000.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	45.71	43.48
TraesCS2D01G562500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	45.71	43.48
Bra019828.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	44.0	40.74
TraesCS2A01G591800.1	Wheat	extracellular	24.0	40.38
Bra004290.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	41.71	36.68

Protein Annotations

EnsemblPlants:Bra027240.1	EnsemblPlants:Bra027240.1-P	EnsemblPlantsGene:Bra027240	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0009506	GO:GO:0016020	GO:GO:0016021	InterPro:DUF1218	PANTHER:PTHR31769	PANTHER:PTHR31769:SF39
PFAM:PF06749	SEG:seg	SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI0002547A23	UniProt:M4EEM8
MapMan:35.2	:	:	:	:	:

Description

AT3G15480 (E=2e-075) | unknown protein

Coordinates

chrA05:+:19898304..19899240

Molecular Weight (calculated)

19288.6 Da

IEP (calculated)

8.302

GRAVY (calculated)

0.643

Length

175 amino acids

Sequence
(BLAST)

001: MASKLVVIIV FILDLIAVGL AIAAEQRRSV GKVVTDTEKT YEYCVYGTDI ATSYGAGAFL LLFISQVLIM SASRCFCCGK SLNPGGSRAC ALLLFLICWV
101: FFLVAEVCLL AASIRNAYHT QYRTMWNIDN PPSCEVIRKG VFAAGAAFTL FTAIVSQFYY VCYSRARDAY QNPSY

Best Arabidopsis Sequence Match ( AT3G15480.1 )
(BLAST)

001: MASKLVVIIV FILDLIAVGL AIAAEQRRSV GKVETDRDKQ YDYCVYGTDI ATSYGAGAFV LLFVSQVLIM AASRCFCCGK SLNPGGSRAC AIILFLICWV
101: FFLIAEMCLL AASIRNAYHT QYRKMWKVED PPSCEVIRKG VFAAGAAFTL FTAIVSQFYY VCYSRARDAY QNPSY

Arabidopsis Description

AT3g15480/MJK13_14 [Source:UniProtKB/TrEMBL;Acc:Q9LDK1]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.