Factsheet for TraesCS2A01G591700.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G562500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	100.0	97.28
TraesCS2B01G592000.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	98.32	95.65
Zm00001d026625_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	75.42	72.19
EES11652	Sorghum	endoplasmic reticulum, extracellular, vacuole	70.39	68.85
Os04t0678200-01	Rice	plasma membrane	69.27	67.76
TraesCS2A01G591800.1	Wheat	extracellular	35.2	60.58
VIT_19s0014g03190.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	54.19	52.43
VIT_00s0652g00020.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	50.84	50.28
Solyc12g013650.1.1	Tomato	extracellular, plasma membrane, vacuole	51.96	50.0
Solyc07g063340.2.1	Tomato	nucleus	51.96	50.0
PGSC0003DMT400032432	Potato	endoplasmic reticulum, plasma membrane, vacuole	51.96	50.0
PGSC0003DMT400039574	Potato	extracellular, plasma membrane, vacuole	51.4	49.46
TraesCS3A01G415300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	51.4	49.2
PGSC0003DMT400057628	Potato	extracellular, plasma membrane, vacuole	49.72	48.9
KRH25778	Soybean	extracellular	21.79	48.75
Solyc02g078630.2.1	Tomato	extracellular, plasma membrane, vacuole	49.16	48.35
TraesCS1A01G171400.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	49.16	48.09
KRH22133	Soybean	extracellular, plasma membrane, vacuole	49.16	47.57
AT1G61065.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	47.49	47.22
KRH27207	Soybean	endoplasmic reticulum	48.6	47.03
CDY53808	Canola	endoplasmic reticulum, extracellular, vacuole	45.81	46.86
Bra019000.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	45.81	46.86
KRH49998	Soybean	endoplasmic reticulum, extracellular, vacuole	47.49	46.45
CDY56821	Canola	endoplasmic reticulum, extracellular, vacuole	45.25	46.29
AT3G15480.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	45.25	46.29
CDY02534	Canola	endoplasmic reticulum, extracellular, vacuole	45.25	46.29
CDY26029	Canola	endoplasmic reticulum, extracellular, vacuole	45.25	46.29
KRH55341	Soybean	endoplasmic reticulum, extracellular, vacuole	24.02	46.24
Bra027240.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	44.69	45.71
Bra019050.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	44.13	45.66
CDX89250	Canola	endoplasmic reticulum, plasma membrane, vacuole	44.13	45.66
AT1G52910.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	44.13	45.14
CDY29310	Canola	endoplasmic reticulum, plasma membrane, vacuole	43.58	45.09
CDY29839	Canola	endoplasmic reticulum, extracellular, vacuole	43.58	45.09
Bra026350.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	43.58	45.09
Bra030968.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	36.31	44.52
CDX92831	Canola	endoplasmic reticulum, extracellular, vacuole	43.02	44.51
AT4G27435.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	43.02	44.51
CDX97672	Canola	endoplasmic reticulum, plasma membrane, vacuole	43.02	44.0
CDY67483	Canola	extracellular	43.58	43.33
CDY50209	Canola	extracellular	43.58	43.33
PGSC0003DMT400039595	Potato	extracellular, mitochondrion	34.08	43.26
KRH20498	Soybean	endoplasmic reticulum, extracellular	43.58	42.62
Bra031458.1-P	Field mustard	extracellular	20.11	41.86
TraesCS7A01G338100.1	Wheat	extracellular	43.02	40.31
KRH13651	Soybean	endoplasmic reticulum, extracellular	24.58	39.29
TraesCS7A01G022500.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	43.58	39.0
CDY52490	Canola	extracellular	18.44	38.37
TraesCS4A01G470000.1	Wheat	endoplasmic reticulum	43.58	34.51

Protein Annotations

EnsemblPlants:TraesCS2A01G591700.1	EnsemblPlantsGene:TraesCS2A01G591700	InterPro:DUF1218	PANTHER:PTHR31769	PANTHER:PTHR31769:SF18	PFAM:PF06749
SEG:seg	SignalP:SignalP-TM	TMHMM:TMhelix	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr2A:-:779269712..779271487

Molecular Weight (calculated)

19389.1 Da

IEP (calculated)

9.467

GRAVY (calculated)

0.740

Length

179 amino acids

Sequence
(BLAST)

001: MASIVVIGLV LLLDILAFVL AIGAERRRST AQLGEAEPGG RRYCVYDTDA STWYGVSALA LLLVGQAVAM AASRCFCCGR ALSPGRWRFF SGLFFVLCWL
101: TFVIAEVCLL AGSVRNAYHT KYVSGYYNCA MLRRGVFAAG AAFAFLTTLF VMLHYVFYSK ARAAPPPIIN GGGIGMTRI

Best Arabidopsis Sequence Match ( AT1G52910.1 )
(BLAST)

001: MASKLVIIIV FILDLIAVGL AIAAEQRRSV GKVVPDGEKE FEHCEYGSDI ATSYGAGAFV LLFISQVIIM VASRCFCCGK ALKPGGSRAC GIMLFLICWV
101: FFLIAEVCLL AGSIRNAYHT TYRRMWNIEN PPSCEVIRKG VFAAGASFAL FTAIVSQFYY ISYSRARDGY QTPHY

Arabidopsis Description

At1g52910 [Source:UniProtKB/TrEMBL;Acc:Q9C930]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.