CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

plastid 2
cytosol 2
endoplasmic reticulum 3
plasma membrane 3
extracellular 3
vacuole 2
golgi 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
PProwler:	secretory
PTS1:	peroxisome
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH25778	Soybean	extracellular	56.25	78.75
KRH49998	Soybean	endoplasmic reticulum, extracellular, vacuole	73.21	44.81
KRH20498	Soybean	endoplasmic reticulum, extracellular	70.54	43.17
VIT_00s0652g00020.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	57.14	35.36
Bra031458.1-P	Field mustard	extracellular	25.89	33.72
PGSC0003DMT400057628	Potato	extracellular, plasma membrane, vacuole	54.46	33.52
Solyc02g078630.2.1	Tomato	extracellular, plasma membrane, vacuole	54.46	33.52
AT1G61065.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	53.57	33.33
CDY52490	Canola	extracellular	25.0	32.56
CDY67483	Canola	extracellular	49.11	30.56
CDY50209	Canola	extracellular	49.11	30.56
KRH22133	Soybean	extracellular, plasma membrane, vacuole	49.11	29.73
KRH27207	Soybean	endoplasmic reticulum	49.11	29.73
TraesCS2D01G562500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	41.07	25.0
Os04t0678200-01	Rice	plasma membrane	40.18	24.59
TraesCS2A01G591700.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	39.29	24.58
TraesCS2B01G592000.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	40.18	24.46
EES11652	Sorghum	endoplasmic reticulum, extracellular, vacuole	38.39	23.5
Zm00001d026625_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	37.5	22.46
KRH75370	Soybean	extracellular	37.5	21.99
KRH45268	Soybean	extracellular	36.61	21.47
KRH35900	Soybean	extracellular	34.82	20.0
KRH55341	Soybean	endoplasmic reticulum, extracellular, vacuole	5.36	6.45
TraesCS2A01G591800.1	Wheat	extracellular	3.57	3.85

Protein Annotations

EMBL:ACUP02009772	EnsemblPlants:KRH13651	EnsemblPlantsGene:GLYMA_15G254200	EntrezGene:100783394	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:DUF1218	PANTHER:PTHR31769	PANTHER:PTHR31769:SF16	PFAM:PF06749	ProteinID:KRH13651
ProteinID:KRH13651.1	TMHMM:TMhelix	UniParc:UPI0002949631	UniProt:K7MDW7	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr15:+:48312758..48316860

Molecular Weight (calculated)

12486.2 Da

IEP (calculated)

9.158

GRAVY (calculated)

0.093

Length

112 amino acids

Sequence
(BLAST)

001: MHVLWESYET QWIKIMVNLL VHITSRVTFI IAASCLLAGS VRNMYHTEYR DPIMGERAPS CQTLRKGVFG AGAAFIVFTG ITSELNYVSF SKANNNGPPP
101: YARDTGVRMA NL

Best Arabidopsis Sequence Match ( AT1G61065.1 )
(BLAST)

001: MASVLLLLLV FVFDLIAFGL AVAAEQRRTT WQISRESRDL SYCVYDKDIA TGLGVGSFLV LLASQLLIMV ASRCLCCGRA LTPSGSRSWA IFLFITTWVF
101: FFIAQVCLLA GSVRNAYHTK YRVYFGNTSP SCRSLRKGVF GAGAAFIVLT GIVSELYYVT LSRAKDFQPS RDPGIRMSSL

Arabidopsis Description

1,3-beta-glucan synthase component (DUF1218) [Source:UniProtKB/TrEMBL;Acc:Q8W576]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.