Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G68220.1 | KRH42483 | AT2G01950.1 | 19000166 |
| AT1G68220.1 | KRH58580 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_01s0011g04020.t01 | Wine grape | extracellular | 69.74 | 70.47 |
| PGSC0003DMT400078545 | Potato | extracellular | 66.67 | 67.01 |
| Solyc05g008900.2.1 | Tomato | extracellular | 65.64 | 65.98 |
| Bra004290.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 66.15 | 64.82 |
| CDY01897 | Canola | extracellular | 66.15 | 64.82 |
| CDX96039 | Canola | extracellular | 65.64 | 64.32 |
| AT1G68220.1 | Thale cress | extracellular | 61.54 | 59.7 |
| EES14816 | Sorghum | plasma membrane | 53.85 | 52.76 |
| Os08t0261100-01 | Rice | endoplasmic reticulum, extracellular, plasma membrane | 53.85 | 52.76 |
| Zm00001d050182_P001 | Maize | plasma membrane | 53.33 | 52.26 |
| Zm00001d024066_P001 | Maize | plasma membrane | 52.31 | 51.26 |
| TraesCS7A01G022500.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 52.31 | 51.0 |
| GSMUA_Achr1P21230_001 | Banana | golgi, plasma membrane, vacuole | 60.51 | 45.91 |
| TraesCS7D01G019700.1 | Wheat | plasma membrane | 51.79 | 45.29 |
| TraesCS4A01G470000.1 | Wheat | endoplasmic reticulum | 52.31 | 45.13 |
| KRH22133 | Soybean | extracellular, plasma membrane, vacuole | 41.54 | 43.78 |
| KRH27207 | Soybean | endoplasmic reticulum | 41.03 | 43.24 |
| KRH55341 | Soybean | endoplasmic reticulum, extracellular, vacuole | 20.51 | 43.01 |
| KRH49998 | Soybean | endoplasmic reticulum, extracellular, vacuole | 39.49 | 42.08 |
| KRH75370 | Soybean | extracellular | 40.51 | 41.36 |
| KRH45268 | Soybean | extracellular | 40.0 | 40.84 |
| KRH20498 | Soybean | endoplasmic reticulum, extracellular | 37.95 | 40.44 |
| KRH25778 | Soybean | extracellular | 16.41 | 40.0 |
| HORVU7Hr1G002450.1 | Barley | plastid | 52.31 | 39.38 |
| HORVU1Hr1G013960.1 | Barley | extracellular | 21.54 | 38.18 |
| KRH13651 | Soybean | endoplasmic reticulum, extracellular | 20.0 | 34.82 |
Protein Annotations
| EMBL:ACUP02006706 | EnsemblPlants:KRH35900 | EnsemblPlantsGene:GLYMA_10G271000 | EntrezGene:100808582 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:DUF1218 | PANTHER:PTHR31769 | PANTHER:PTHR31769:SF3 | PFAM:PF06749 | ProteinID:KRH35900 |
| ProteinID:KRH35900.1 | SEG:seg | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI000233D0E3 | UniProt:I1LET5 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:-:49322674..49323913
Molecular Weight (calculated)
21022.3 Da
IEP (calculated)
7.575
GRAVY (calculated)
0.381
Length
195 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVSVTILVL IIALHLIAFV FAVGAERRRS EAKVVPDEYD DQTFCHYTTD ASTVYGLSAV ALLLLSHTVL NGVTRCLCCG KGLVSGCSAT SAVISFILSW
101: ISFLAAEACL LAGSARNAYH TKYRGYFVNH DLSCATLRKG VFAAGAALTL LSMLTAILYY WAHSKADTGF WEKHHNEGLG LATQHHHQGP DSDKA
101: ISFLAAEACL LAGSARNAYH TKYRGYFVNH DLSCATLRKG VFAAGAALTL LSMLTAILYY WAHSKADTGF WEKHHNEGLG LATQHHHQGP DSDKA
001: MAVSVSILTV VTALHLLAFV FAFGAERRRS TAVPVPDQYD EKTICKYGTE ASTVYGMSAF GLLLVSQAVV NGVTKCLCFG KGLVTGTSYT VWAIVFFVVS
101: WVSFLGAEAC LLGGSARNAY HTKSEGIYKG KELSCAVLPV GVFAAGAAFT LMSLIATILY YLAHSKADTG GWEKHQNDGI NIGMTTPSDA PKQQNTEFNK
201: V
101: WVSFLGAEAC LLGGSARNAY HTKSEGIYKG KELSCAVLPV GVFAAGAAFT LMSLIATILY YLAHSKADTG GWEKHQNDGI NIGMTTPSDA PKQQNTEFNK
201: V
Arabidopsis Description
Aerobic coproporphyrinogen-III oxidase (DUF1218) [Source:UniProtKB/TrEMBL;Acc:Q9C9F7]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.