Factsheet for HORVU7Hr1G002450.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
mitochondrion 2
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, vacuole
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	vacuole
TargetP:	mitochondrion
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU3Hr1G018030.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G68220.1	HORVU3Hr1G018030.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G022500.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	75.29	97.5
TraesCS7D01G019700.1	Wheat	plasma membrane	74.52	86.55
TraesCS4A01G470000.1	Wheat	endoplasmic reticulum	74.52	85.4
EES14816	Sorghum	plasma membrane	63.71	82.91
Zm00001d050182_P001	Maize	plasma membrane	62.93	81.91
Os08t0261100-01	Rice	endoplasmic reticulum, extracellular, plasma membrane	62.93	81.91
Zm00001d024066_P001	Maize	plasma membrane	62.16	80.9
HORVU1Hr1G013960.1	Barley	extracellular	28.19	66.36
PGSC0003DMT400078545	Potato	extracellular	41.7	55.67
VIT_01s0011g04020.t01	Wine grape	extracellular	41.31	55.44
Solyc05g008900.2.1	Tomato	extracellular	41.31	55.15
KRH35900	Soybean	extracellular	39.38	52.31
HORVU3Hr1G009130.2	Barley	cytosol, extracellular	16.99	50.57
AT1G68220.1	Thale cress	extracellular	37.84	48.76
GSMUA_Achr1P21230_001	Banana	golgi, plasma membrane, vacuole	47.88	48.25
Bra004290.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	37.07	48.24
CDY01897	Canola	extracellular	37.07	48.24
CDX96039	Canola	extracellular	37.07	48.24
HORVU3Hr1G092420.1	Barley	endoplasmic reticulum, extracellular, vacuole	33.59	47.03
HORVU7Hr1G083180.1	Barley	extracellular	30.5	41.36
HORVU2Hr1G083540.5	Barley	endoplasmic reticulum, extracellular, vacuole	18.53	40.68
HORVU7Hr1G051440.1	Barley	extracellular	13.51	37.63
HORVU6Hr1G041520.3	Barley	endoplasmic reticulum, extracellular	17.37	36.59
HORVU4Hr1G054230.1	Barley	extracellular	14.29	30.83

Protein Annotations

EnsemblPlants:HORVU7Hr1G002450.1	EnsemblPlantsGene:HORVU7Hr1G002450	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:DUF1218
PANTHER:PTHR31769	PANTHER:PTHR31769:SF3	PFAM:PF06749	SEG:seg	TMHMM:TMhelix	UniParc:UPI000B462F8E
UniProt:A0A287VDU1	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:4659281..4663257

Molecular Weight (calculated)

27826.6 Da

IEP (calculated)

9.919

GRAVY (calculated)

0.177

Length

259 amino acids

Sequence
(BLAST)

001: FPKCRASTYC PLFPKRKPAL IASRRLVGPR THSHSPLPPS SVSPSTSSRR RSRSRSRSPM AGFATSRPAS LALSGFLIFL NVFAFLLAVG AEQRRSTGKV
101: VPDEYDERSY CLYDTDASTV YGVCAFFVLL LAQLLVTGVT RCLCFGPALS SRGCALAAFA VSWLTFLIAE ACLVGGSAKN AYHTKYLGYY TKHDLVSCAA
201: LRKGVFAAAA AMTLINLVAS LVYYWSYSKA ADGGFIKHQN EAGVGMTDYG LDRGSGPGL

Best Arabidopsis Sequence Match ( AT1G68220.1 )
(BLAST)

001: MAVSVSILTV VTALHLLAFV FAFGAERRRS TAVPVPDQYD EKTICKYGTE ASTVYGMSAF GLLLVSQAVV NGVTKCLCFG KGLVTGTSYT VWAIVFFVVS
101: WVSFLGAEAC LLGGSARNAY HTKSEGIYKG KELSCAVLPV GVFAAGAAFT LMSLIATILY YLAHSKADTG GWEKHQNDGI NIGMTTPSDA PKQQNTEFNK
201: V

Arabidopsis Description

Aerobic coproporphyrinogen-III oxidase (DUF1218) [Source:UniProtKB/TrEMBL;Acc:Q9C9F7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.