CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 7
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH27207	Soybean	endoplasmic reticulum	97.3	97.3
KRH55341	Soybean	endoplasmic reticulum, extracellular, vacuole	38.92	77.42
Solyc12g013650.1.1	Tomato	extracellular, plasma membrane, vacuole	73.51	73.12
PGSC0003DMT400039574	Potato	extracellular, plasma membrane, vacuole	73.51	73.12
Solyc07g063340.2.1	Tomato	nucleus	72.97	72.58
PGSC0003DMT400032432	Potato	endoplasmic reticulum, plasma membrane, vacuole	72.97	72.58
PGSC0003DMT400039595	Potato	extracellular, mitochondrion	45.95	60.28
KRH49998	Soybean	endoplasmic reticulum, extracellular, vacuole	58.38	59.02
KRH20498	Soybean	endoplasmic reticulum, extracellular	56.76	57.38
KRH25778	Soybean	extracellular	23.78	55.0
EES11652	Sorghum	endoplasmic reticulum, extracellular, vacuole	54.05	54.64
Os04t0678200-01	Rice	plasma membrane	53.51	54.1
Zm00001d026625_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	52.97	52.41
TraesCS2A01G591700.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	47.57	49.16
KRH13651	Soybean	endoplasmic reticulum, extracellular	29.73	49.11
TraesCS2D01G562500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	48.11	48.37
TraesCS2B01G592000.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	47.57	47.83
KRH75370	Soybean	extracellular	48.11	46.6
KRH45268	Soybean	extracellular	47.03	45.55
KRH35900	Soybean	extracellular	43.78	41.54
TraesCS2A01G591800.1	Wheat	extracellular	20.54	36.54

Protein Annotations

EMBL:ACUP02008381	EMBL:BT089357	EnsemblPlants:KRH22133	EnsemblPlantsGene:GLYMA_13G279500	EntrezGene:100305647	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:DUF1218	PANTHER:PTHR31769	PANTHER:PTHR31769:SF39	PFAM:PF06749
ProteinID:KRH22133	ProteinID:KRH22133.1	SEG:seg	SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI00018C71A5
UniProt:C6SW14	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:-:38078900..38081247

Molecular Weight (calculated)

20193.5 Da

IEP (calculated)

7.952

GRAVY (calculated)

0.552

Length

185 amino acids

Sequence
(BLAST)

001: MASKLLLITV FVFDLIAFGL AVAAEQRRST ASVVTDNEKN YNYCVYNSDI ATGYGVGAFL FLLVSQVLIM VASRCFCCGK PLNPGGSRAC AVVLFIICWV
101: FFIIAEVCLL AGSVENAYHT KYRTIFGENP PSCETVRKGV FAAGAAFVFF TAIISEFYYI NYSRARESFQ PYAGGETGVG MGTYK

Best Arabidopsis Sequence Match ( AT4G27435.1 )
(BLAST)

001: MASKIVSAIV FVFNLIAFGL AVAAEQRRST ARVVQDTEVQ YNYCVYDSDR ATGYGVGAFL FSVASQILIM LVSRCFCCGK PLKPGGSRAL ALILFIVSWM
101: FFLIAEICLL AGSVENAYHT KYRTMFMDNP PDCQTLRKGV FAAGASFVFF NAIVSQFYYF FYFSAAEASL SPY

Arabidopsis Description

At4g27438 [Source:UniProtKB/TrEMBL;Acc:Q940M6]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.