Subcellular Localization
min:
: max
Winner_takes_all: extracellular, plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 7
- golgi 5
- plasma membrane 7
- endoplasmic reticulum 5
- vacuole 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400057628 | Potato | extracellular, plasma membrane, vacuole | 97.8 | 97.8 |
| VIT_00s0652g00020.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 73.08 | 73.48 |
| AT1G61065.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 69.78 | 70.56 |
| KRH49998 | Soybean | endoplasmic reticulum, extracellular, vacuole | 66.48 | 66.12 |
| CDY50209 | Canola | extracellular | 64.29 | 65.0 |
| CDY67483 | Canola | extracellular | 64.29 | 65.0 |
| KRH20498 | Soybean | endoplasmic reticulum, extracellular | 63.19 | 62.84 |
| Solyc07g063340.2.1 | Tomato | nucleus | 63.19 | 61.83 |
| Solyc12g013650.1.1 | Tomato | extracellular, plasma membrane, vacuole | 60.99 | 59.68 |
| KRH25778 | Soybean | extracellular | 25.27 | 57.5 |
| KRH13651 | Soybean | endoplasmic reticulum, extracellular | 33.52 | 54.46 |
| Os04t0678200-01 | Rice | plasma membrane | 52.75 | 52.46 |
| Bra031458.1-P | Field mustard | extracellular | 24.73 | 52.33 |
| CDY52490 | Canola | extracellular | 24.18 | 51.16 |
| EES11652 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 50.55 | 50.27 |
| TraesCS2A01G591700.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 48.35 | 49.16 |
| Zm00001d026625_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 49.45 | 48.13 |
| Solyc05g009330.2.1 | Tomato | plasma membrane | 50.0 | 47.89 |
| TraesCS2B01G592000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 48.35 | 47.83 |
| TraesCS2D01G562500.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 48.35 | 47.83 |
| Solyc05g008900.2.1 | Tomato | extracellular | 45.6 | 42.78 |
| TraesCS2A01G591800.1 | Wheat | extracellular | 20.33 | 35.58 |
Protein Annotations
| EnsemblPlants:Solyc02g078630.2.1 | EnsemblPlantsGene:Solyc02g078630.2 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:DUF1218 |
| PANTHER:PTHR31769 | PANTHER:PTHR31769:SF16 | PFAM:PF06749 | SEG:seg | SignalP:SignalP-TM | TMHMM:TMhelix |
| UniParc:UPI00027682C0 | UniProt:K4B987 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr2:-:43275094..43278491
Molecular Weight (calculated)
20027.6 Da
IEP (calculated)
8.473
GRAVY (calculated)
0.592
Length
182 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTLLLVLV FVLDLIAFGL AVAAEQRRAT ATINRDAEYN YCVYESDVAT GLGVGSFFFL LSSQLLIMFA SRCLCCGRAL RPGKPRSWAI VLFITCWVTF
101: FIAEVCLLAA SVRNAYHTKY RTYLAQHPPS CEVLRKGVFG AGAAFIVFTG IVSELFYVSY SKADEGSIPP RMDGGIRMNA FM
101: FIAEVCLLAA SVRNAYHTKY RTYLAQHPPS CEVLRKGVFG AGAAFIVFTG IVSELFYVSY SKADEGSIPP RMDGGIRMNA FM
001: MASVLLLLLV FVFDLIAFGL AVAAEQRRTT WQISRESRDL SYCVYDKDIA TGLGVGSFLV LLASQLLIMV ASRCLCCGRA LTPSGSRSWA IFLFITTWVF
101: FFIAQVCLLA GSVRNAYHTK YRVYFGNTSP SCRSLRKGVF GAGAAFIVLT GIVSELYYVT LSRAKDFQPS RDPGIRMSSL
101: FFIAQVCLLA GSVRNAYHTK YRVYFGNTSP SCRSLRKGVF GAGAAFIVLT GIVSELYYVT LSRAKDFQPS RDPGIRMSSL
Arabidopsis Description
1,3-beta-glucan synthase component (DUF1218) [Source:UniProtKB/TrEMBL;Acc:Q8W576]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.