Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- golgi 4
- plasma membrane 4
- endoplasmic reticulum 5
- vacuole 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G415300.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 98.4 | 98.4 |
| TraesCS3B01G450500.1 | Wheat | nucleus | 97.33 | 98.38 |
| HORVU3Hr1G092420.1 | Barley | endoplasmic reticulum, extracellular, vacuole | 95.19 | 96.22 |
| Zm00001d005394_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 83.96 | 84.86 |
| Zm00001d019597_P001 | Maize | plasma membrane | 82.35 | 84.62 |
| EER98474 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 83.42 | 84.32 |
| Os07t0462200-01 | Rice | plasma membrane | 83.42 | 84.32 |
| GSMUA_Achr4P29970_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 65.24 | 65.59 |
| OQU91983 | Sorghum | extracellular | 28.34 | 64.63 |
| GSMUA_Achr5P12000_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 63.1 | 64.13 |
| TraesCS1D01G171800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 54.01 | 55.19 |
| TraesCS2D01G562500.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 49.73 | 50.54 |
| TraesCS7D01G345300.1 | Wheat | extracellular | 42.78 | 41.88 |
| TraesCS7D01G019700.1 | Wheat | plasma membrane | 45.45 | 38.12 |
| GSMUA_Achr1P00070_001 | Banana | plasma membrane | 62.57 | 25.49 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G411100.1 | EnsemblPlantsGene:TraesCS3D01G411100 | InterPro:DUF1218 | PANTHER:PTHR31769 | PANTHER:PTHR31769:SF39 | PFAM:PF06749 |
| SEG:seg | SignalP:SignalP-TM | TMHMM:TMhelix | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr3D:-:523782358..523784491
Molecular Weight (calculated)
19806.1 Da
IEP (calculated)
8.644
GRAVY (calculated)
0.557
Length
187 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMASIVVQV SALLLNLIAF GLAVAAEQRR SKATVTPDLA KEYDYCFYDS DVATGYGVGA LLLLVAAQAV VMLASRCFCC GRGLKPGGSR ACALMLFLFS
101: WLTFLVAAAC LLAGSVRNAY HTRYRGIFNG DPLSCETLRK GVFAAGAAFT FFTAILSEFY YISYSKSRDA AGGAPYGGSS IGMGPYN
101: WLTFLVAAAC LLAGSVRNAY HTRYRGIFNG DPLSCETLRK GVFAAGAAFT FFTAILSEFY YISYSKSRDA AGGAPYGGSS IGMGPYN
001: MASKLVIIIV FILDLIAVGL AIAAEQRRSV GKVVPDGEKE FEHCEYGSDI ATSYGAGAFV LLFISQVIIM VASRCFCCGK ALKPGGSRAC GIMLFLICWV
101: FFLIAEVCLL AGSIRNAYHT TYRRMWNIEN PPSCEVIRKG VFAAGASFAL FTAIVSQFYY ISYSRARDGY QTPHY
101: FFLIAEVCLL AGSIRNAYHT TYRRMWNIEN PPSCEVIRKG VFAAGASFAL FTAIVSQFYY ISYSRARDGY QTPHY
Arabidopsis Description
At1g52910 [Source:UniProtKB/TrEMBL;Acc:Q9C930]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.