Factsheet for Bra030248.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY25585	Canola	nucleus	94.96	98.89
CDX89451	Canola	nucleus	97.77	98.05
Bra038534.1-P	Field mustard	nucleus	81.18	90.0
AT2G22300.1	Thale cress	cytosol	85.74	85.66
GSMUA_AchrUn_...	Banana	nucleus	12.03	54.15
Solyc04g056270.2.1	Tomato	nucleus	50.24	50.73
KRH43177	Soybean	nucleus	50.92	47.64
KRH59333	Soybean	nucleus	50.63	46.52
GSMUA_Achr6P10390_001	Banana	nucleus	47.82	46.29
TraesCS5B01G521100.2	Wheat	cytosol	39.86	46.13
OQU91909	Sorghum	cytosol	44.03	44.42
GSMUA_AchrUn_...	Banana	cytosol	39.19	44.06
Os10t0375600-01	Rice	nucleus	43.65	43.99
Os03t0191000-01	Rice	nucleus	43.84	43.93
Zm00001d028007_P004	Maize	nucleus	43.55	43.8
Bra009382.1-P	Field mustard	nucleus	42.68	43.69
HORVU4Hr1G078620.1	Barley	cytosol	44.62	43.4
Zm00001d014286_P002	Maize	nucleus	43.55	43.3
TraesCS4D01G304500.3	Wheat	cytosol	44.71	43.25
TraesCS4B01G306300.4	Wheat	cytosol	44.71	43.21
TraesCS4A01G407100.1	Wheat	cytosol	44.42	42.96
Bra037769.1-P	Field mustard	cytosol	42.58	42.7
OQU93088	Sorghum	mitochondrion	41.03	42.56
Zm00001d030518_P005	Maize	cytosol	44.81	42.27
VIT_07s0141g00250.t01	Wine grape	nucleus	54.61	41.61
Bra022188.1-P	Field mustard	cytosol	26.58	32.24
Bra004096.1-P	Field mustard	nucleus	28.81	30.52
Bra034007.1-P	Field mustard	nucleus	29.29	29.84
Bra004217.1-P	Field mustard	nucleus	28.71	29.69
Bra038040.1-P	Field mustard	nucleus	26.09	29.27
Bra004218.1-P	Field mustard	nucleus	0.1	0.34

Protein Annotations

Gene3D:1.20.5.190	Gene3D:1.25.40.20	MapMan:15.5.26	Gene3D:2.60.40.10	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	EnsemblPlantsGene:Bra030248	EnsemblPlants:Bra030248.1	EnsemblPlants:Bra030248.1-P	InterPro:CG-1_dom	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	InterPro:IPR000048	InterPro:IPR002110	InterPro:IPR005559	InterPro:IPR013783
InterPro:IPR020683	InterPro:IPR036770	InterPro:IQ_motif_EF-hand-BS	InterPro:Ig-like_fold	InterPro:Ig_E-set	UniProt:M4EN78
InterPro:P-loop_NTPase	PFAM:PF00612	PFAM:PF03859	PFscan:PS50088	PFscan:PS50096	PFscan:PS50297
PFscan:PS51437	PANTHER:PTHR23335	PANTHER:PTHR23335:SF12	SMART:SM00015	SMART:SM01076	SUPFAM:SSF48403
SUPFAM:SSF52540	SUPFAM:SSF81296	UniParc:UPI0002544026	SEG:seg	:	:

Description

AT2G22300 (E=0.0) CAMTA3, SR1 | SR1 (SIGNAL RESPONSIVE 1); calmodulin binding / transcription regulator

Coordinates

chrA04:+:9635836..9640798

Molecular Weight (calculated)

115193.0 Da

IEP (calculated)

5.339

GRAVY (calculated)

-0.554

Length

1031 amino acids

Sequence
(BLAST)

0001: MAEARRFGLN NELDVGQILS EARNRWLRPP EICEILQNYQ KFQISTEPPT TPASGSVFLF DRKVLRYFRK DGHNWRKKRD GKTVKEAHER LKAGSVDVLH
0101: CYYAHGQDNE NFQRRSYWML QEELSHIVFV HYLEVKGSRV STSYNRMQRT EDSTRSSQET GEVYTSERNG YASGSINQYD HSNNQSQATD SASVNGVHTP
0201: ELEDAQSAYN QQGSPILYSH QALQQPPATS FDPYYQMSLT PRDSYQKEIH TISSSTMVEK GRTINGPVVT NSIKNKKSID SQTWEEILGN CGSGGEGLPM
0301: QPHSEHEGLD QMLQSYSFTM QDFASLQESI VKSQNQELNS GLTSDRSLWL QGQAVDIEPN ALSNLASSEK APYLSTMKQH LLDGALGEEG LKKMDSFNRW
0401: MSKELGELGD VGVTADANES FTHSSSTAYW EEVESEDVSN GGYVMSPSLS KEQLFSIIDF APNWTYVGCE VKVLVSGKFL KMAESGEWCC MFGQTEVPAD
0501: IIANGILECV APMHEAGRVP FYVTCSNRLA CSEVREFEYK VLESQGFDRE TYDSSTGCNS IESLEARFVK LLCSKSDCTN SSLPGGNDSD LSQVSEKISL
0601: LLFENDDQLD QMLMNEISQE NMKNNLLQEA LKESLHSWLL QKIAEGGKGP NVLDEGGQGV LHFAAALGYN WALEPTIVAG VSVDFRDVNG WTALHWAAFF
0701: GRELIIGSLI ALGASPGTLT DPNPDFPSGS TPSDLAYANG YKGIAGYLSE YALRTHVSLL SLNEKNAETS LGGAVEAAPS PSSSALTDSL TAVRNASQAA
0801: ARIHQVFRAQ SFQKKQMKEF GDRKLGMSEE RALSMLAPKT HKQGRGHSDD SVQAAAIRIQ NKFRGYKGRK DYLITRQRII KIQAHVRGYQ VRKNYRKIIW
0901: SVGILEKVIL RWRRKGAGLR GFKSDALVTK MQDGTEKEED DDFFKQGRKQ TEERLEKALA RVKSMVQYPE ARDQYRRLLN VVNDIQESKV EKALANSEEA
1001: TCFDDDLIDI EALLGDDDTL MMPMSSTLWN A

Best Arabidopsis Sequence Match ( AT2G22300.2 )
(BLAST)

0001: MAEARRFSPV HELDVGQILS EARHRWLRPP EICEILQNYQ RFQISTEPPT TPSSGSVFMF DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKAGSVDVLH
0101: CYYAHGQDNE NFQRRSYWLL QEELSHIVFV HYLEVKGSRV STSFNRMQRT EDAARSPQET GDALTSEHDG YASCSFNQND HSNHSQTTDS ASVNGFHSPE
0201: LEDAESAYNQ HGSSTAYSHQ ELQQPATGGN LTGFDPYYQI SLTPRDSYQK ELRTIPVTDS SIMVDKSKTI NSPGVTNGLK NRKSIDSQTW EEILGNCGSG
0301: VEALPLQPNS EHEVLDQILE SSFTMQDFAS LQESMVKSQN QELNSGLTSD RTVWFQGQDM ELNAISNLAS NEKAPYLSTM KQHLLHGALG EEGLKKMDSF
0401: NRWMSKELGD VGVIADANES FTQSSSRTYW EEVESEDGSN GHNSRRDMDG YVMSPSLSKE QLFSINDFSP SWAYVGCEVV VFVTGKFLKT REETEIGEWS
0501: CMFGQTEVPA DVISNGILQC VAPMHEAGRV PFYVTCSNRL ACSEVREFEY KVAESQVFDR EADDESTIDI LEARFVKLLC SKSENTSPVS GNDSDLSQLS
0601: EKISLLLFEN DDQLDQMLMN EISQENMKNN LLQEFLKESL HSWLLQKIAE GGKGPSVLDE GGQGVLHFAA SLGYNWALEP TIIAGVSVDF RDVNGWTALH
0701: WAAFFGRERI IGSLIALGAA PGTLTDPNPD FPSGSTPSDL AYANGHKGIA GYLSEYALRA HVSLLSLNDK NAETVEMAPS PSSSSLTDSL TAVRNATQAA
0801: ARIHQVFRAQ SFQKKQLKEF GDKKLGMSEE RALSMLAPKT HKSGRAHSDD SVQAAAIRIQ NKFRGYKGRK DYLITRQRII KIQAHVRGYQ FRKNYRKIIW
0901: SVGVLEKVIL RWRRKGAGLR GFKSEALVEK MQDGTEKEED DDFFKQGRKQ TEDRLQKALA RVKSMVQYPE ARDQYRRLLN VVNDIQESKV EKALENSEAT
1001: CFDDDDDLID IEALLEDDDT LMLPMSSSLW TS

Arabidopsis Description

CAMTA3Calmodulin-binding transcription activator 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8GSA7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.