Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | nucleus | 13.52 | 60.26 |
| KRH43177 | Soybean | nucleus | 59.26 | 54.9 |
| KRH59333 | Soybean | nucleus | 59.16 | 53.83 |
| CDY13771 | Canola | cytosol, nucleus, plastid | 48.29 | 53.35 |
| Bra038534.1-P | Field mustard | nucleus | 48.48 | 53.23 |
| CDX76935 | Canola | nucleus | 47.8 | 51.53 |
| CDY25585 | Canola | nucleus | 48.87 | 50.4 |
| Solyc01g060170.2.1 | Tomato | nucleus | 7.84 | 50.31 |
| AT2G22300.1 | Thale cress | cytosol | 50.83 | 50.29 |
| Bra030248.1-P | Field mustard | nucleus | 50.73 | 50.24 |
| CDX89451 | Canola | nucleus | 50.44 | 50.1 |
| GSMUA_Achr6P10390_001 | Banana | nucleus | 52.2 | 50.05 |
| OQU91909 | Sorghum | cytosol | 48.78 | 48.73 |
| Os03t0191000-01 | Rice | nucleus | 49.07 | 48.69 |
| Os10t0375600-01 | Rice | nucleus | 48.48 | 48.39 |
| VIT_07s0141g00250.t01 | Wine grape | nucleus | 63.96 | 48.26 |
| TraesCS5B01G521100.2 | Wheat | cytosol | 41.82 | 47.92 |
| Zm00001d028007_P004 | Maize | nucleus | 47.99 | 47.8 |
| Zm00001d014286_P002 | Maize | nucleus | 48.38 | 47.64 |
| HORVU4Hr1G078620.1 | Barley | cytosol | 49.17 | 47.36 |
| Solyc01g105230.2.1 | Tomato | nucleus | 47.89 | 47.02 |
| TraesCS4D01G304500.3 | Wheat | cytosol | 48.97 | 46.9 |
| TraesCS4B01G306300.4 | Wheat | cytosol | 48.97 | 46.86 |
| TraesCS4A01G407100.1 | Wheat | cytosol | 48.78 | 46.72 |
| GSMUA_AchrUn_... | Banana | cytosol | 41.92 | 46.67 |
| OQU93088 | Sorghum | mitochondrion | 45.25 | 46.48 |
| Zm00001d030518_P005 | Maize | cytosol | 49.17 | 45.93 |
| Solyc01g057270.2.1 | Tomato | nucleus | 35.16 | 37.51 |
| Solyc05g015650.2.1 | Tomato | nucleus | 30.75 | 33.58 |
| Solyc12g035520.1.1 | Tomato | nucleus | 30.85 | 32.37 |
| Solyc12g099340.1.1 | Tomato | nucleus | 28.21 | 31.48 |
| Solyc01g060140.2.1 | Tomato | nucleus | 19.88 | 30.43 |
Protein Annotations
Description
Calmodulin-binding transcription activator 3 [Source:Projected from Arabidopsis thaliana (AT2G22300) UniProtKB/Swiss-Prot;Acc:Q8GSA7]
Coordinates
chr4:-:53923428..53933858
Molecular Weight (calculated)
114153.0 Da
IEP (calculated)
6.081
GRAVY (calculated)
-0.611
Length
1021 amino acids
Sequence
(BLAST)
(BLAST)
0001: MADSRRYGLN AQLDIEQILL EAQHRWLRPA EICEILKNYQ KFRIAPEPPN RPPSGSLFLF DRKVLRYFRK DGHSWRKKRD GKTVKEAHER LKAGSIDVLH
0101: CYYAHGEENE NFQRRSYWML EEEMSHIVLV HYREVKGNRT NFSRIREPQQ VTPDLQETDE DVHSSEVDSS ASAKFYPNDY QVNSQVTDTT SFSSAQASEY
0201: EDAESVYNQH PTSGFHSFLD AQPSAGDGLA VPYHPIPFSN DQVQFAGSSG TSFSSIPPGN GNTSTANTYV PSRNLDFASW GTISVNNPAA YQSLHFQPSG
0301: QSSANNMMHE QGNTTMGQIC SNDFTRQEHE NHIDGLGNWQ TSEVDSSFIS KWSMDQKLNP DLTSGQTIGS SGVYGVEHHN SLEASQLLPA QQDKHPIQNE
0401: LQSQLSDANI GGSLNADLDH NLSLGVKTDY SALKQPLLDG VLKREGLKKL DSFDRWISKE LGDVSESHMQ SNSSSYWDNV GDEDGVGNST IASQVQLDTY
0501: VLSPSLAQDQ IFSIIDFSPN WAFSGSEIKV LITGRFLKSQ QEVENCSWAC MFGELEVPAE VIADGVLRCH TPVQKAGRVP FYITCSNRLA CSEVREFEFR
0601: VTEEKVKDQL LQKLLKEKLH VWLLQKVAEG GKGPNILDEG GQGVLHFAAA LGYDWAVPPT IAAGVSVNFR DVNGWTALHW AASYGRERTV GFLISLGAAT
0701: GALTDPTPKH PSGRTPADLA SSNGHKGIAG YLAESSLSSH LFSLELKEKK QGENEQAFGE AVQTVSERTA TPAWDGDWSH GVSLKDSLAA VRNATQAAAR
0801: IHQVFRVQSF QRKQLKEYGG SEFGLSDERA LSLLAMKTNR AGQHDEPHAA AVRIQNKFRS WKGRRDFLLI RQRIIKIQAH VRGHQVRNKY KNIIWSVGIL
0901: EKVILRWRRK GSGLRGFKPE APTEGSNMQD QPVQEDDYDF LKEGRKQTEE RLQKALERVK SMVQYPEARD QYRRLLNVVS DMQEPNSTAA SYNSAEAVDF
1001: NDDLIDLGDL LDDDTFMPTA P
0101: CYYAHGEENE NFQRRSYWML EEEMSHIVLV HYREVKGNRT NFSRIREPQQ VTPDLQETDE DVHSSEVDSS ASAKFYPNDY QVNSQVTDTT SFSSAQASEY
0201: EDAESVYNQH PTSGFHSFLD AQPSAGDGLA VPYHPIPFSN DQVQFAGSSG TSFSSIPPGN GNTSTANTYV PSRNLDFASW GTISVNNPAA YQSLHFQPSG
0301: QSSANNMMHE QGNTTMGQIC SNDFTRQEHE NHIDGLGNWQ TSEVDSSFIS KWSMDQKLNP DLTSGQTIGS SGVYGVEHHN SLEASQLLPA QQDKHPIQNE
0401: LQSQLSDANI GGSLNADLDH NLSLGVKTDY SALKQPLLDG VLKREGLKKL DSFDRWISKE LGDVSESHMQ SNSSSYWDNV GDEDGVGNST IASQVQLDTY
0501: VLSPSLAQDQ IFSIIDFSPN WAFSGSEIKV LITGRFLKSQ QEVENCSWAC MFGELEVPAE VIADGVLRCH TPVQKAGRVP FYITCSNRLA CSEVREFEFR
0601: VTEEKVKDQL LQKLLKEKLH VWLLQKVAEG GKGPNILDEG GQGVLHFAAA LGYDWAVPPT IAAGVSVNFR DVNGWTALHW AASYGRERTV GFLISLGAAT
0701: GALTDPTPKH PSGRTPADLA SSNGHKGIAG YLAESSLSSH LFSLELKEKK QGENEQAFGE AVQTVSERTA TPAWDGDWSH GVSLKDSLAA VRNATQAAAR
0801: IHQVFRVQSF QRKQLKEYGG SEFGLSDERA LSLLAMKTNR AGQHDEPHAA AVRIQNKFRS WKGRRDFLLI RQRIIKIQAH VRGHQVRNKY KNIIWSVGIL
0901: EKVILRWRRK GSGLRGFKPE APTEGSNMQD QPVQEDDYDF LKEGRKQTEE RLQKALERVK SMVQYPEARD QYRRLLNVVS DMQEPNSTAA SYNSAEAVDF
1001: NDDLIDLGDL LDDDTFMPTA P
0001: MAEARRFSPV HELDVGQILS EARHRWLRPP EICEILQNYQ RFQISTEPPT TPSSGSVFMF DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKAGSVDVLH
0101: CYYAHGQDNE NFQRRSYWLL QEELSHIVFV HYLEVKGSRV STSFNRMQRT EDAARSPQET GDALTSEHDG YASCSFNQND HSNHSQTTDS ASVNGFHSPE
0201: LEDAESAYNQ HGSSTAYSHQ ELQQPATGGN LTGFDPYYQI SLTPRDSYQK ELRTIPVTDS SIMVDKSKTI NSPGVTNGLK NRKSIDSQTW EEILGNCGSG
0301: VEALPLQPNS EHEVLDQILE SSFTMQDFAS LQESMVKSQN QELNSGLTSD RTVWFQGQDM ELNAISNLAS NEKAPYLSTM KQHLLHGALG EEGLKKMDSF
0401: NRWMSKELGD VGVIADANES FTQSSSRTYW EEVESEDGSN GHNSRRDMDG YVMSPSLSKE QLFSINDFSP SWAYVGCEVV VFVTGKFLKT REETEIGEWS
0501: CMFGQTEVPA DVISNGILQC VAPMHEAGRV PFYVTCSNRL ACSEVREFEY KVAESQVFDR EADDESTIDI LEARFVKLLC SKSENTSPVS GNDSDLSQLS
0601: EKISLLLFEN DDQLDQMLMN EISQENMKNN LLQEFLKESL HSWLLQKIAE GGKGPSVLDE GGQGVLHFAA SLGYNWALEP TIIAGVSVDF RDVNGWTALH
0701: WAAFFGRERI IGSLIALGAA PGTLTDPNPD FPSGSTPSDL AYANGHKGIA GYLSEYALRA HVSLLSLNDK NAETVEMAPS PSSSSLTDSL TAVRNATQAA
0801: ARIHQVFRAQ SFQKKQLKEF GDKKLGMSEE RALSMLAPKT HKSGRAHSDD SVQAAAIRIQ NKFRGYKGRK DYLITRQRII KIQAHVRGYQ FRKNYRKIIW
0901: SVGVLEKVIL RWRRKGAGLR GFKSEALVEK MQDGTEKEED DDFFKQGRKQ TEDRLQKALA RVKSMVQYPE ARDQYRRLLN VVNDIQESKV EKALENSEAT
1001: CFDDDDDLID IEALLEDDDT LMLPMSSSLW TS
0101: CYYAHGQDNE NFQRRSYWLL QEELSHIVFV HYLEVKGSRV STSFNRMQRT EDAARSPQET GDALTSEHDG YASCSFNQND HSNHSQTTDS ASVNGFHSPE
0201: LEDAESAYNQ HGSSTAYSHQ ELQQPATGGN LTGFDPYYQI SLTPRDSYQK ELRTIPVTDS SIMVDKSKTI NSPGVTNGLK NRKSIDSQTW EEILGNCGSG
0301: VEALPLQPNS EHEVLDQILE SSFTMQDFAS LQESMVKSQN QELNSGLTSD RTVWFQGQDM ELNAISNLAS NEKAPYLSTM KQHLLHGALG EEGLKKMDSF
0401: NRWMSKELGD VGVIADANES FTQSSSRTYW EEVESEDGSN GHNSRRDMDG YVMSPSLSKE QLFSINDFSP SWAYVGCEVV VFVTGKFLKT REETEIGEWS
0501: CMFGQTEVPA DVISNGILQC VAPMHEAGRV PFYVTCSNRL ACSEVREFEY KVAESQVFDR EADDESTIDI LEARFVKLLC SKSENTSPVS GNDSDLSQLS
0601: EKISLLLFEN DDQLDQMLMN EISQENMKNN LLQEFLKESL HSWLLQKIAE GGKGPSVLDE GGQGVLHFAA SLGYNWALEP TIIAGVSVDF RDVNGWTALH
0701: WAAFFGRERI IGSLIALGAA PGTLTDPNPD FPSGSTPSDL AYANGHKGIA GYLSEYALRA HVSLLSLNDK NAETVEMAPS PSSSSLTDSL TAVRNATQAA
0801: ARIHQVFRAQ SFQKKQLKEF GDKKLGMSEE RALSMLAPKT HKSGRAHSDD SVQAAAIRIQ NKFRGYKGRK DYLITRQRII KIQAHVRGYQ FRKNYRKIIW
0901: SVGVLEKVIL RWRRKGAGLR GFKSEALVEK MQDGTEKEED DDFFKQGRKQ TEDRLQKALA RVKSMVQYPE ARDQYRRLLN VVNDIQESKV EKALENSEAT
1001: CFDDDDDLID IEALLEDDDT LMLPMSSSLW TS
Arabidopsis Description
CAMTA3Calmodulin-binding transcription activator 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8GSA7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.