Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030248.1-P | Field mustard | nucleus | 98.89 | 94.96 |
| CDX89451 | Canola | nucleus | 98.18 | 94.55 |
| CDY13771 | Canola | cytosol, nucleus, plastid | 78.69 | 84.31 |
| CDX76935 | Canola | nucleus | 80.2 | 83.84 |
| AT2G22300.1 | Thale cress | cytosol | 85.66 | 82.17 |
| CDX96915 | Canola | nucleus | 6.46 | 81.01 |
| CDY61797 | Canola | nucleus | 6.77 | 59.82 |
| GSMUA_AchrUn_... | Banana | nucleus | 12.53 | 54.15 |
| Solyc04g056270.2.1 | Tomato | nucleus | 50.4 | 48.87 |
| KRH43177 | Soybean | nucleus | 51.21 | 46.01 |
| TraesCS5B01G521100.2 | Wheat | cytosol | 40.81 | 45.34 |
| KRH59333 | Soybean | nucleus | 50.91 | 44.92 |
| GSMUA_Achr6P10390_001 | Banana | nucleus | 47.88 | 44.51 |
| CDX92455 | Canola | cytosol | 28.18 | 44.01 |
| CDX81217 | Canola | nucleus | 43.23 | 43.36 |
| OQU91909 | Sorghum | cytosol | 44.55 | 43.15 |
| Os03t0191000-01 | Rice | nucleus | 44.75 | 43.05 |
| Os10t0375600-01 | Rice | nucleus | 44.44 | 43.01 |
| Zm00001d028007_P004 | Maize | nucleus | 44.34 | 42.83 |
| HORVU4Hr1G078620.1 | Barley | cytosol | 45.76 | 42.74 |
| CDY21580 | Canola | cytosol, nucleus, plastid | 43.03 | 42.64 |
| TraesCS4D01G304500.3 | Wheat | cytosol | 45.86 | 42.59 |
| TraesCS4B01G306300.4 | Wheat | cytosol | 45.86 | 42.55 |
| CDX69907 | Canola | nucleus | 43.13 | 42.4 |
| TraesCS4A01G407100.1 | Wheat | cytosol | 45.56 | 42.31 |
| GSMUA_AchrUn_... | Banana | cytosol | 39.09 | 42.2 |
| Zm00001d014286_P002 | Maize | nucleus | 44.04 | 42.04 |
| CDX81478 | Canola | nucleus | 6.67 | 42.04 |
| CDY18719 | Canola | cytosol | 42.93 | 41.71 |
| OQU93088 | Sorghum | mitochondrion | 41.72 | 41.55 |
| Zm00001d030518_P005 | Maize | cytosol | 45.25 | 40.99 |
| VIT_07s0141g00250.t01 | Wine grape | nucleus | 55.56 | 40.65 |
| CDX95894 | Canola | cytosol | 27.47 | 31.89 |
| CDX92108 | Canola | cytosol | 27.47 | 31.89 |
| CDY45590 | Canola | cytosol | 9.7 | 31.27 |
| CDY69566 | Canola | nucleus | 8.38 | 30.4 |
| CDY07431 | Canola | nucleus | 29.39 | 30.16 |
| CDY28897 | Canola | nucleus | 29.49 | 29.92 |
| CDY51184 | Canola | nucleus | 30.1 | 29.07 |
| CDY12637 | Canola | nucleus | 30.1 | 28.82 |
| CDY58036 | Canola | nucleus | 26.57 | 28.62 |
| CDY22778 | Canola | nucleus | 26.57 | 28.62 |
| CDY01799 | Canola | nucleus | 28.89 | 27.9 |
| CDX96099 | Canola | nucleus | 29.39 | 23.13 |
Protein Annotations
| Gene3D:1.20.5.190 | Gene3D:1.25.40.20 | MapMan:15.5.26 | Gene3D:2.60.40.10 | GO:A0A078GGM8 | UniProt:A0A078GGM8 |
| InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | EnsemblPlants:CDY25585 | ProteinID:CDY25585 | ProteinID:CDY25585.1 |
| InterPro:CG-1_dom | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00032849001 | InterPro:IPR000048 |
| InterPro:IPR002110 | InterPro:IPR005559 | InterPro:IPR013783 | InterPro:IPR020683 | InterPro:IPR036770 | InterPro:IQ_motif_EF-hand-BS |
| InterPro:Ig-like_fold | InterPro:Ig_E-set | InterPro:P-loop_NTPase | PFAM:PF00612 | PFAM:PF03859 | PFscan:PS50088 |
| PFscan:PS50096 | PFscan:PS50297 | PFscan:PS51437 | PANTHER:PTHR23335 | PANTHER:PTHR23335:SF12 | SMART:SM00015 |
| SMART:SM01076 | SUPFAM:SSF48403 | SUPFAM:SSF52540 | SUPFAM:SSF81296 | UniParc:UPI0004EF141F | SEG:seg |
Description
BnaA04g12770DBnaA04g12770D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GGM8]
Coordinates
chrLK032177:+:42863..48192
Molecular Weight (calculated)
110968.0 Da
IEP (calculated)
5.386
GRAVY (calculated)
-0.576
Length
990 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEARRFGLN NELDVGQILS EARNRWLRPP EICEILQNYQ KFQISTEPPT TPASGSVFLF DRKVLRYFRK DGHNWRKKRD GKTVKEAHER LKAGSVDVLH
101: CYYAHGQDNE NFQRRSYWML QEELSHIVFV HYLEVKGSRV STSYNRMQRT EDSTRSSQET GEVYTSERNG YASGSINQYD HSNNQSQATD SASVNGVHTP
201: ELEDAQSAYN QQGSPILYSH QALHQPPSTS FDPYYQMSLT PRDSYQKEIH TIPSSAMVEK SRTTNGPVVT NSIKNKKSID SQTWEEILGN CGSGGEGLPM
301: QPHSEHEGLD QMLQSYSFTM QDFASLQESI VKSQNQELNS GLTSDRSMWL QGQAVDIEPN ALSNLASSEK APYLSTMKQH LLDGALGEEG LKKMDSFNRW
401: MSKELGELGD SFTHSSSTAY WEEEQLFSII DFAPNWTYVG CEVKVLVSGK FLKTAESGEW CCMFGQTEVP ADIIANGILE CVAPMHEAGR VPFYVTCSNR
501: LACSEVREFE YKVLESQGFD RDTDDSSTAC NSIESLEARF VKLLCSKSDC TNSSLPGGND SDLSQVSEKI SLLLFENDDQ LDQMLMNEIS QENMKNNLLQ
601: EALKESLHSW LLQKIAEGGK GPNVLDEGGQ GVLHFAAALG YNWALEPTIV AGVSVDFRDV NGWTALHWAA FFGRELIIGS LIALGASPGT LTDPNPDFPS
701: GSTPSDLAYA NGYKGIAGYL SEYALRTHVS LLSLNEKNAE TSLGGAVEAA PSPSSSALTD SLTAVRNASQ AAARIHQVFR AQSFQKKQMK EFGDRKLGMS
801: EERRGHSDDS VQAAAIRIQN KFRGYKGRKD YLITRQRIIK IQAHVRGYQV RKNYRKIIWS VGILEKVILR WRRKGAGLRG FKSDALVTKM QDGTEKEEDD
901: DFFKQGRKQT EERLEKALAR VKSMVQYPEA RDQYRRLLNV VNDIQESKVE KALANSEEAT CFDDDLIDIE ALLGDDDTLM MPMSSTLWNA
101: CYYAHGQDNE NFQRRSYWML QEELSHIVFV HYLEVKGSRV STSYNRMQRT EDSTRSSQET GEVYTSERNG YASGSINQYD HSNNQSQATD SASVNGVHTP
201: ELEDAQSAYN QQGSPILYSH QALHQPPSTS FDPYYQMSLT PRDSYQKEIH TIPSSAMVEK SRTTNGPVVT NSIKNKKSID SQTWEEILGN CGSGGEGLPM
301: QPHSEHEGLD QMLQSYSFTM QDFASLQESI VKSQNQELNS GLTSDRSMWL QGQAVDIEPN ALSNLASSEK APYLSTMKQH LLDGALGEEG LKKMDSFNRW
401: MSKELGELGD SFTHSSSTAY WEEEQLFSII DFAPNWTYVG CEVKVLVSGK FLKTAESGEW CCMFGQTEVP ADIIANGILE CVAPMHEAGR VPFYVTCSNR
501: LACSEVREFE YKVLESQGFD RDTDDSSTAC NSIESLEARF VKLLCSKSDC TNSSLPGGND SDLSQVSEKI SLLLFENDDQ LDQMLMNEIS QENMKNNLLQ
601: EALKESLHSW LLQKIAEGGK GPNVLDEGGQ GVLHFAAALG YNWALEPTIV AGVSVDFRDV NGWTALHWAA FFGRELIIGS LIALGASPGT LTDPNPDFPS
701: GSTPSDLAYA NGYKGIAGYL SEYALRTHVS LLSLNEKNAE TSLGGAVEAA PSPSSSALTD SLTAVRNASQ AAARIHQVFR AQSFQKKQMK EFGDRKLGMS
801: EERRGHSDDS VQAAAIRIQN KFRGYKGRKD YLITRQRIIK IQAHVRGYQV RKNYRKIIWS VGILEKVILR WRRKGAGLRG FKSDALVTKM QDGTEKEEDD
901: DFFKQGRKQT EERLEKALAR VKSMVQYPEA RDQYRRLLNV VNDIQESKVE KALANSEEAT CFDDDLIDIE ALLGDDDTLM MPMSSTLWNA
0001: MAEARRFSPV HELDVGQILS EARHRWLRPP EICEILQNYQ RFQISTEPPT TPSSGSVFMF DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKAGSVDVLH
0101: CYYAHGQDNE NFQRRSYWLL QEELSHIVFV HYLEVKGSRV STSFNRMQRT EDAARSPQET GDALTSEHDG YASCSFNQND HSNHSQTTDS ASVNGFHSPE
0201: LEDAESAYNQ HGSSTAYSHQ ELQQPATGGN LTGFDPYYQI SLTPRDSYQK ELRTIPVTDS SIMVDKSKTI NSPGVTNGLK NRKSIDSQTW EEILGNCGSG
0301: VEALPLQPNS EHEVLDQILE SSFTMQDFAS LQESMVKSQN QELNSGLTSD RTVWFQGQDM ELNAISNLAS NEKAPYLSTM KQHLLHGALG EEGLKKMDSF
0401: NRWMSKELGD VGVIADANES FTQSSSRTYW EEVESEDGSN GHNSRRDMDG YVMSPSLSKE QLFSINDFSP SWAYVGCEVV VFVTGKFLKT REETEIGEWS
0501: CMFGQTEVPA DVISNGILQC VAPMHEAGRV PFYVTCSNRL ACSEVREFEY KVAESQVFDR EADDESTIDI LEARFVKLLC SKSENTSPVS GNDSDLSQLS
0601: EKISLLLFEN DDQLDQMLMN EISQENMKNN LLQEFLKESL HSWLLQKIAE GGKGPSVLDE GGQGVLHFAA SLGYNWALEP TIIAGVSVDF RDVNGWTALH
0701: WAAFFGRERI IGSLIALGAA PGTLTDPNPD FPSGSTPSDL AYANGHKGIA GYLSEYALRA HVSLLSLNDK NAETVEMAPS PSSSSLTDSL TAVRNATQAA
0801: ARIHQVFRAQ SFQKKQLKEF GDKKLGMSEE RALSMLAPKT HKSGRAHSDD SVQAAAIRIQ NKFRGYKGRK DYLITRQRII KIQAHVRGYQ FRKNYRKIIW
0901: SVGVLEKVIL RWRRKGAGLR GFKSEALVEK MQDGTEKEED DDFFKQGRKQ TEDRLQKALA RVKSMVQYPE ARDQYRRLLN VVNDIQESKV EKALENSEAT
1001: CFDDDDDLID IEALLEDDDT LMLPMSSSLW TS
0101: CYYAHGQDNE NFQRRSYWLL QEELSHIVFV HYLEVKGSRV STSFNRMQRT EDAARSPQET GDALTSEHDG YASCSFNQND HSNHSQTTDS ASVNGFHSPE
0201: LEDAESAYNQ HGSSTAYSHQ ELQQPATGGN LTGFDPYYQI SLTPRDSYQK ELRTIPVTDS SIMVDKSKTI NSPGVTNGLK NRKSIDSQTW EEILGNCGSG
0301: VEALPLQPNS EHEVLDQILE SSFTMQDFAS LQESMVKSQN QELNSGLTSD RTVWFQGQDM ELNAISNLAS NEKAPYLSTM KQHLLHGALG EEGLKKMDSF
0401: NRWMSKELGD VGVIADANES FTQSSSRTYW EEVESEDGSN GHNSRRDMDG YVMSPSLSKE QLFSINDFSP SWAYVGCEVV VFVTGKFLKT REETEIGEWS
0501: CMFGQTEVPA DVISNGILQC VAPMHEAGRV PFYVTCSNRL ACSEVREFEY KVAESQVFDR EADDESTIDI LEARFVKLLC SKSENTSPVS GNDSDLSQLS
0601: EKISLLLFEN DDQLDQMLMN EISQENMKNN LLQEFLKESL HSWLLQKIAE GGKGPSVLDE GGQGVLHFAA SLGYNWALEP TIIAGVSVDF RDVNGWTALH
0701: WAAFFGRERI IGSLIALGAA PGTLTDPNPD FPSGSTPSDL AYANGHKGIA GYLSEYALRA HVSLLSLNDK NAETVEMAPS PSSSSLTDSL TAVRNATQAA
0801: ARIHQVFRAQ SFQKKQLKEF GDKKLGMSEE RALSMLAPKT HKSGRAHSDD SVQAAAIRIQ NKFRGYKGRK DYLITRQRII KIQAHVRGYQ FRKNYRKIIW
0901: SVGVLEKVIL RWRRKGAGLR GFKSEALVEK MQDGTEKEED DDFFKQGRKQ TEDRLQKALA RVKSMVQYPE ARDQYRRLLN VVNDIQESKV EKALENSEAT
1001: CFDDDDDLID IEALLEDDDT LMLPMSSSLW TS
Arabidopsis Description
CAMTA3Calmodulin-binding transcription activator 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8GSA7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.