Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009382.1-P | Field mustard | nucleus | 99.9 | 99.9 |
| CDY21580 | Canola | cytosol, nucleus, plastid | 95.23 | 96.0 |
| CDX92455 | Canola | cytosol | 58.59 | 93.06 |
| CDX96915 | Canola | nucleus | 6.95 | 88.61 |
| AT5G09410.3 | Thale cress | cytosol | 76.56 | 72.33 |
| CDX81217 | Canola | nucleus | 69.61 | 71.02 |
| CDY18719 | Canola | cytosol | 68.62 | 67.81 |
| CDY61797 | Canola | nucleus | 7.35 | 66.07 |
| GSMUA_AchrUn_... | Banana | nucleus | 12.51 | 55.02 |
| KRH42152 | Soybean | nucleus | 55.21 | 51.53 |
| KRH10541 | Soybean | nucleus | 55.51 | 51.38 |
| KRH58270 | Soybean | nucleus | 55.21 | 51.1 |
| KRH43898 | Soybean | nucleus | 54.62 | 50.88 |
| CDX81478 | Canola | nucleus | 7.45 | 47.77 |
| Solyc01g105230.2.1 | Tomato | nucleus | 48.06 | 46.54 |
| CDY13771 | Canola | cytosol, nucleus, plastid | 41.51 | 45.24 |
| TraesCS5B01G521100.2 | Wheat | cytosol | 39.62 | 44.78 |
| CDX76935 | Canola | nucleus | 41.71 | 44.35 |
| GSMUA_Achr6P10390_001 | Banana | nucleus | 46.47 | 43.94 |
| Zm00001d028007_P004 | Maize | nucleus | 44.49 | 43.71 |
| Os03t0191000-01 | Rice | nucleus | 44.49 | 43.54 |
| CDY25585 | Canola | nucleus | 42.4 | 43.13 |
| CDX89451 | Canola | nucleus | 43.59 | 42.7 |
| Os10t0375600-01 | Rice | nucleus | 43.3 | 42.62 |
| OQU91909 | Sorghum | cytosol | 43.1 | 42.47 |
| HORVU4Hr1G078620.1 | Barley | cytosol | 44.69 | 42.45 |
| Zm00001d014286_P002 | Maize | nucleus | 43.5 | 42.24 |
| OQU93088 | Sorghum | mitochondrion | 41.51 | 42.05 |
| TraesCS4D01G304500.3 | Wheat | cytosol | 44.29 | 41.84 |
| TraesCS4A01G407100.1 | Wheat | cytosol | 44.29 | 41.84 |
| TraesCS4B01G306300.4 | Wheat | cytosol | 44.29 | 41.8 |
| GSMUA_AchrUn_... | Banana | cytosol | 36.25 | 39.8 |
| Zm00001d030518_P005 | Maize | cytosol | 43.0 | 39.62 |
| CDY69566 | Canola | nucleus | 8.04 | 29.67 |
| CDX95894 | Canola | cytosol | 25.02 | 29.54 |
| CDY07431 | Canola | nucleus | 28.1 | 29.33 |
| CDY45590 | Canola | cytosol | 8.94 | 29.32 |
| CDX92108 | Canola | cytosol | 24.73 | 29.19 |
| CDY58036 | Canola | nucleus | 26.51 | 29.05 |
| CDY22778 | Canola | nucleus | 26.51 | 29.05 |
| CDY28897 | Canola | nucleus | 28.1 | 29.0 |
| CDY51184 | Canola | nucleus | 29.1 | 28.59 |
| CDY12637 | Canola | nucleus | 29.1 | 28.34 |
| CDY01799 | Canola | nucleus | 28.2 | 27.71 |
| CDX96099 | Canola | nucleus | 27.61 | 22.1 |
Protein Annotations
| Gene3D:1.20.5.190 | Gene3D:1.25.40.20 | MapMan:15.5.26 | Gene3D:2.60.40.10 | GO:A0A078BZR9 | InterPro:Ankyrin_rpt |
| InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | EnsemblPlants:CDX69907 | ProteinID:CDX69907 | ProteinID:CDX69907.1 | InterPro:CG-1_dom |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00135980001 | InterPro:IPR000048 |
| InterPro:IPR002110 | InterPro:IPR005559 | InterPro:IPR013783 | InterPro:IPR020683 | InterPro:IPR036770 | InterPro:IQ_motif_EF-hand-BS |
| InterPro:Ig-like_fold | InterPro:Ig_E-set | InterPro:P-loop_NTPase | PFAM:PF00612 | PFAM:PF03859 | PFAM:PF12796 |
| PFscan:PS50088 | PFscan:PS50096 | PFscan:PS50297 | PFscan:PS51437 | PANTHER:PTHR23335 | PANTHER:PTHR23335:SF12 |
| SMART:SM00015 | SMART:SM00248 | SMART:SM01076 | SUPFAM:SSF48403 | SUPFAM:SSF52540 | SUPFAM:SSF81296 |
| UniParc:UPI0004EEEA67 | SEG:seg | : | : | : | : |
Description
BnaA10g22560D
Coordinates
chrLK031790:-:2304721..2309733
Molecular Weight (calculated)
113552.0 Da
IEP (calculated)
5.968
GRAVY (calculated)
-0.517
Length
1007 amino acids
Sequence
(BLAST)
(BLAST)
0001: MADRGSFGFI SPPRLDMEQL LSEAQHRWLR PAEICEILRN YHKFHIATES PTRPASGSLF LFDRKVLRYF RKDGHNWRKK KDGKTIKEAH EKLKVGSIDV
0101: LHCYYAHGEG NENFQRRCYW MLEVELMHIV FVHYLEVKGS RTSIGMKENN SNSLSGTASV NIDSAASPTS RLSSYCEDAD SGDSHQSSSV LRASPEPQTG
0201: NRNGWTSAPG MRTVSQVHGN RVGETDSQRL FDVQTWDAVD NLVTRYDQPC NNLLLEERTD KGGMLPAEHL RSPLQTQLNW QIPAQDDLPL PKWPGYLLPH
0301: SGMTDDTDLA LLEQSAQDNF ESFSSLLDIE HLQSDGISPS DMESEYIPVK KSLLRHEDSL KKVDSFSRWA SKELGEMEDL QMQSSRGDIA WTSVDCETAA
0401: AGVAFSPSLS EDQRFTILDY WPKCAQTDAD VEVVVIGTFL LSPQEVTICS WSCMFGEVEV PAEILVDGVL CCHAPPHTAG QVPFYVTCSN RFACSELREF
0501: DFRSGSTKKI DAAGIYGYST KEASLQMRFE KLLAHRDFVQ EHQIFEDVVE KRRKISKIIL LNEEKENLFP RIYERHSTKQ EPKELVLRQQ FEDELYIWLI
0601: HKVTEEGKGP NILDEGGQGV LHFVAALGYD WAIKPILAAG VNINFRDANG WSALHWAAFS GREETVAVLV SLGADAGALT DPSPELPLGK TAADLAYGKE
0701: HRGISGFLAE SSLTSYLEKL TMESKENSPA NSGGPKAVQT VSERTAAPMS SGDIPETLSL KDSLTAVRNA TQAADRLHQV FRMQSFQRKQ LSGFDVDDDD
0801: EIGISNELAV SFAASKTKNP GQSEIFVHSA ATHIQKKYRG WKKRKEFLLI RQRVVKIQAH VRGHQVRKQY KPIVWSVGLL EKIILRWRRK GTGLRGFKRN
0901: AVPKTVEPEP QCPMVPKEDD YDFLEKGRKQ TEARLEKALT RVKSMVQYPE ARDQYRRLLT VVEGFRENEA SSSLSVNNRE EPVNYEDDDL IDIDSLLNDD
1001: IFMSTSP
0101: LHCYYAHGEG NENFQRRCYW MLEVELMHIV FVHYLEVKGS RTSIGMKENN SNSLSGTASV NIDSAASPTS RLSSYCEDAD SGDSHQSSSV LRASPEPQTG
0201: NRNGWTSAPG MRTVSQVHGN RVGETDSQRL FDVQTWDAVD NLVTRYDQPC NNLLLEERTD KGGMLPAEHL RSPLQTQLNW QIPAQDDLPL PKWPGYLLPH
0301: SGMTDDTDLA LLEQSAQDNF ESFSSLLDIE HLQSDGISPS DMESEYIPVK KSLLRHEDSL KKVDSFSRWA SKELGEMEDL QMQSSRGDIA WTSVDCETAA
0401: AGVAFSPSLS EDQRFTILDY WPKCAQTDAD VEVVVIGTFL LSPQEVTICS WSCMFGEVEV PAEILVDGVL CCHAPPHTAG QVPFYVTCSN RFACSELREF
0501: DFRSGSTKKI DAAGIYGYST KEASLQMRFE KLLAHRDFVQ EHQIFEDVVE KRRKISKIIL LNEEKENLFP RIYERHSTKQ EPKELVLRQQ FEDELYIWLI
0601: HKVTEEGKGP NILDEGGQGV LHFVAALGYD WAIKPILAAG VNINFRDANG WSALHWAAFS GREETVAVLV SLGADAGALT DPSPELPLGK TAADLAYGKE
0701: HRGISGFLAE SSLTSYLEKL TMESKENSPA NSGGPKAVQT VSERTAAPMS SGDIPETLSL KDSLTAVRNA TQAADRLHQV FRMQSFQRKQ LSGFDVDDDD
0801: EIGISNELAV SFAASKTKNP GQSEIFVHSA ATHIQKKYRG WKKRKEFLLI RQRVVKIQAH VRGHQVRKQY KPIVWSVGLL EKIILRWRRK GTGLRGFKRN
0901: AVPKTVEPEP QCPMVPKEDD YDFLEKGRKQ TEARLEKALT RVKSMVQYPE ARDQYRRLLT VVEGFRENEA SSSLSVNNRE EPVNYEDDDL IDIDSLLNDD
1001: IFMSTSP
0001: MVDRRSFGSI TPPLQLDMEQ LLSEAQHRWL RPTEICEILQ NYHKFHIASE SPTRPASGSL FLFDRKVLRY FRKDGHNWRK KKDGKTIREA HEKLKVGSID
0101: VLHCYYAHGE ANENFQRRCY WMLEQHLMHI VFVHYLEVKG NRTSIGMKEN NSNSVNGTAS VNIDSTASPT STLSSLCEDA DTGDSQQASS VLRPSPEPQT
0201: GNRYGWTPAP GMRNVSQVHG NRVRESDSQR LVDVRALDTV GNSLTRFHDQ PYCNNLLTQM QPSNTDSMLV EENSEKGGRL KAEHIRNPLQ TQFNWQDDTD
0301: LALFEQSAQD NFETFSSLLG SENLQPFGIS YQAPPSNMDS EYMPVMKILR RSEDSLKKVD SFSKWAIKEL GEMEDLQMQS SRGDIAWTTV ECETAAAGIS
0401: LSPSLSEDQR FTIVDFWPKS AKTDAEVEVM VIGTFLLSPQ EVTKYNWSCM FGEVEVPAEI LVDGVLCCHA PPHTAGHVPF YVTCSNRFAC SEVREFDFLS
0501: GSTQKINATD VYGTYTNEAS LQLRFEKMLA HRDFVHEHHI FEDVGDKRRQ ISKIMLLKEE KEYLLPGTYQ RDSTKQEPKG QLFRELFEEE LYIWLIHKVT
0601: EEGKGPNILD EDGQGILHFV AALGYDWAIK PVLAAGVNIN FRDANGWSAL HWAAFSGREE TVAVLVSLGA DAGALTDPSP ELPLGKTAAD LAYANGHRGI
0701: SGFLAESSLT SYLEKLTVDS KENSPANSCG EKAVQTVSER TAAPMTYGDV PEKLSLKDSL TAVRNATQAA DRLHQVFRMQ SFQRKQLCDI GDDEKIDISD
0801: QLAVSFAASK TKNPGQGDVS LSCAATHIQK KYRGWKKRKE FLLIRQRIVK IQAHVRGHQV RKQYRTVIWS VGLLEKIILR WRRKGNGLRG FKRNAVAKTV
0901: EPEPPVSAIC PRIPQEDEYD YLKEGRKQTE ERLQKALTRV KSMVQYPEAR DQYRRLLTVV EGFRENEASS SASINNKEEE AVNCEEDDFI DIESLLNDDT
1001: LMMSISP
0101: VLHCYYAHGE ANENFQRRCY WMLEQHLMHI VFVHYLEVKG NRTSIGMKEN NSNSVNGTAS VNIDSTASPT STLSSLCEDA DTGDSQQASS VLRPSPEPQT
0201: GNRYGWTPAP GMRNVSQVHG NRVRESDSQR LVDVRALDTV GNSLTRFHDQ PYCNNLLTQM QPSNTDSMLV EENSEKGGRL KAEHIRNPLQ TQFNWQDDTD
0301: LALFEQSAQD NFETFSSLLG SENLQPFGIS YQAPPSNMDS EYMPVMKILR RSEDSLKKVD SFSKWAIKEL GEMEDLQMQS SRGDIAWTTV ECETAAAGIS
0401: LSPSLSEDQR FTIVDFWPKS AKTDAEVEVM VIGTFLLSPQ EVTKYNWSCM FGEVEVPAEI LVDGVLCCHA PPHTAGHVPF YVTCSNRFAC SEVREFDFLS
0501: GSTQKINATD VYGTYTNEAS LQLRFEKMLA HRDFVHEHHI FEDVGDKRRQ ISKIMLLKEE KEYLLPGTYQ RDSTKQEPKG QLFRELFEEE LYIWLIHKVT
0601: EEGKGPNILD EDGQGILHFV AALGYDWAIK PVLAAGVNIN FRDANGWSAL HWAAFSGREE TVAVLVSLGA DAGALTDPSP ELPLGKTAAD LAYANGHRGI
0701: SGFLAESSLT SYLEKLTVDS KENSPANSCG EKAVQTVSER TAAPMTYGDV PEKLSLKDSL TAVRNATQAA DRLHQVFRMQ SFQRKQLCDI GDDEKIDISD
0801: QLAVSFAASK TKNPGQGDVS LSCAATHIQK KYRGWKKRKE FLLIRQRIVK IQAHVRGHQV RKQYRTVIWS VGLLEKIILR WRRKGNGLRG FKRNAVAKTV
0901: EPEPPVSAIC PRIPQEDEYD YLKEGRKQTE ERLQKALTRV KSMVQYPEAR DQYRRLLTVV EGFRENEASS SASINNKEEE AVNCEEDDFI DIESLLNDDT
1001: LMMSISP
Arabidopsis Description
EICBP.BEthylene induced calmodulin binding protein [Source:UniProtKB/TrEMBL;Acc:F4KCL4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.