CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028007_P004	Maize	nucleus	91.45	88.68
Os03t0191000-01	Rice	nucleus	78.37	75.7
HORVU4Hr1G078620.1	Barley	cytosol	77.77	72.92
TraesCS4D01G304500.3	Wheat	cytosol	77.77	72.51
TraesCS4B01G306300.4	Wheat	cytosol	77.67	72.35
TraesCS4A01G407100.1	Wheat	cytosol	77.06	71.86
OQU91909	Sorghum	cytosol	72.74	70.74
TraesCS5B01G521100.2	Wheat	cytosol	61.97	69.14
GSMUA_AchrUn_...	Banana	cytosol	47.18	51.15
GSMUA_Achr6P10390_001	Banana	nucleus	54.53	50.89
KXG36730	Sorghum	nucleus	51.81	50.0
EER94762	Sorghum	nucleus	49.4	47.95
CDX92455	Canola	cytosol	30.38	47.63
CDY13771	Canola	cytosol, nucleus, plastid	42.56	45.78
Bra038534.1-P	Field mustard	nucleus	42.66	45.59
Solyc04g056270.2.1	Tomato	nucleus	46.48	45.25
CDX76935	Canola	nucleus	42.15	44.24
KRH43177	Soybean	nucleus	47.99	43.28
KRH10541	Soybean	nucleus	46.98	42.92
KRH59333	Soybean	nucleus	48.29	42.78
KRH42152	Soybean	nucleus	46.28	42.63
KRH58270	Soybean	nucleus	46.48	42.46
AT2G22300.1	Thale cress	cytosol	44.06	42.44
Solyc01g105230.2.1	Tomato	nucleus	44.27	42.31
KRH43898	Soybean	nucleus	45.98	42.28
CDY21580	Canola	cytosol, nucleus, plastid	42.25	42.04
CDX81217	Canola	nucleus	41.65	41.95
CDY25585	Canola	nucleus	41.55	41.72
CDX69907	Canola	nucleus	42.05	41.51
Bra009382.1-P	Field mustard	nucleus	42.05	41.51
AT5G64220.2	Thale cress	nucleus	43.66	41.33
CDX89451	Canola	nucleus	42.45	41.05
Bra030248.1-P	Field mustard	nucleus	42.56	41.03
CDY18719	Canola	cytosol	41.35	40.33
Bra037769.1-P	Field mustard	cytosol	41.45	40.08
AT5G09410.3	Thale cress	cytosol	41.55	38.74
VIT_07s0141g00250.t01	Wine grape	nucleus	50.8	37.32
EES01985	Sorghum	nucleus	25.55	30.06
OQU81398	Sorghum	nucleus	28.97	28.94
KXG36244	Sorghum	nucleus	24.55	26.7

Protein Annotations

Gene3D:1.20.5.190	Gene3D:1.25.40.20	MapMan:15.5.26	Gene3D:2.60.40.10	UniProt:A0A1Z5SAZ0	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	InterPro:CG-1_dom	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	InterPro:IPR000048	InterPro:IPR002110	InterPro:IPR005559	InterPro:IPR013783	InterPro:IPR020683
InterPro:IPR036770	InterPro:IPT_dom	InterPro:IQ_motif_EF-hand-BS	InterPro:Ig-like_fold	InterPro:Ig_E-set	EnsemblPlants:OQU93088
ProteinID:OQU93088	ProteinID:OQU93088.1	InterPro:P-loop_NTPase	PFAM:PF00612	PFAM:PF01833	PFAM:PF03859
PFscan:PS50088	PFscan:PS50096	PFscan:PS50297	PFscan:PS51437	PANTHER:PTHR23335	PANTHER:PTHR23335:SF7
SMART:SM00015	SMART:SM00248	SMART:SM01076	EnsemblPlantsGene:SORBI_3001G474600	SUPFAM:SSF48403	SUPFAM:SSF52540
SUPFAM:SSF81296	UniParc:UPI000B8B9F27	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:74671806..74678991

Molecular Weight (calculated)

110365.0 Da

IEP (calculated)

5.946

GRAVY (calculated)

-0.549

Length

994 amino acids

Sequence
(BLAST)

001: MAEARRHAIA PQLGGSLFLF DRKVLRYFRK DGHNWRKKRD GKTVKEAHER LKSGSVDVLH CYYAHGEGNE NFQRRSYWML EEDFMHIVLV HYLEVKGGKS
101: TSRIRGHDDM LQAARTDSPL SQLPSQTTEG ESSLSGQASE YEETESDIYS GGSGYHPFSW TQQHENGGGP VMGASIPSSY IPALSLGNFQ GFPATVTNTD
201: IYSYCQDALP GALNEPGLGV GFNGADNQVD PSSLNGLVKP DQGILQMSPP QSTVPSELFP FAEGHGIESF TFDEVYGNGL SIKDADVIGT DEESVWQLPG
301: AISSFPPEDS FQQNDRSLEE NINYPLLKTQ SSSLSEMLKD SFKKSDSFTR WMSKALGEVD DSQIKSSSGV YWNSEETDNI IEASSRDQLD QFTLDPVLAQ
401: DQLFSIDDFS PSWTYAGSKT RVLITGRFLN SNEIQRCKWS CMFGEVEVPA EVSADGTLRC YSPSHKPGRV PFYVTCTNRL ACSEIREFEF RPSVTQYMDA
501: PSPHGATNKT YLQMRLDDLL SLGHNEYQAT VSNPTKEMVD LSKKISSLMT SNDSWSKLLK LASDNEPATD HNQDQFFEKR LKEKLHIWLV HKARDGGKGP
601: NVLDDEGQGV LHLAAALGYD WVIRPTVSAG VNINFRDAHG WTALHWAAFC GRERTVVALI ALGAAPGALT DPTPDFPTGS TPADLASANG YKGISGFLAE
701: SSLTSHLQTL DLKEGKGSNA PEISGLPGIG DVTERRASPL AGEGLQAGSV GDSLGAVRNA AQAAARIYQV FRVQSFQRKQ AVQYEDGNGA VSDDRAISLL
801: SVKPSKPVQL DPLHTAATRI QNKYRGWKGR KEFLLIRQRI VKIQAHVRGH QVRKHYRKII WSVGIVEKVI LRWRRKGAGL RGFRSTEGAM EGNSSSSSNL
901: IQNKPAEDDY DFLQQGRKQT EERLQKALAR VKSMAQYPDA RDQYQRILTV VTKIQESQAM QEKMLDESTE MDEGFFMSEF KELWDDDVPM PSWS

Best Arabidopsis Sequence Match ( AT2G22300.3 )
(BLAST)

001: MFDRKVLRYF RKDGHNWRKK KDGKTVKEAH ERLKAGSVDV LHCYYAHGQD NENFQRRSYW LLQEELSHIV FVHYLEVKGS RVSTSFNRMQ RTEDAARSPQ
101: ETGDALTSEH DGYASCSFNQ NDHSNHSQTT DSASVNGFHS PELEDAESAY NQHGSSTAYS HQELQQPATG GNLTGFDPYY QISLTPRDSY QKELRTIPVT
201: DSSIMVDKSK TINSPGVTNG LKNRKSIDSQ TWEEILGNCG SGVEALPLQP NSEHEVLDQI LESSFTMQDF ASLQESMVKS QNQELNSGLT SDRTVWFQGQ
301: DMELNAISNL ASNEKAPYLS TMKQHLLHGA LGEEGLKKMD SFNRWMSKEL GDVGVIADAN ESFTQSSSRT YWEEVESEDG SNGHNSRRDM DGYVMSPSLS
401: KEQLFSINDF SPSWAYVGCE VVVFVTGKFL KTREETEIGE WSCMFGQTEV PADVISNGIL QCVAPMHEAG RVPFYVTCSN RLACSEVREF EYKVAESQVF
501: DREADDESTI DILEARFVKL LCSKSENTSP VSGNDSDLSQ LSEKISLLLF ENDDQLDQML MNEISQENMK NNLLQEFLKE SLHSWLLQKI AEGGKGPSVL
601: DEGGQGVLHF AASLGYNWAL EPTIIAGVSV DFRDVNGWTA LHWAAFFGRE RIIGSLIALG AAPGTLTDPN PDFPSGSTPS DLAYANGHKG IAGYLSEYAL
701: RAHVSLLSLN DKNAETVEMA PSPSSSSLTD SLTAVRNATQ AAARIHQVFR AQSFQKKQLK EFGDKKLGMS EERALSMLAP KTHKSGRAHS DDSVQAAAIR
801: IQNKFRGYKG RKDYLITRQR IIKIQAHVRG YQFRKNYRKI IWSVGVLEKV ILRWRRKGAG LRGFKSEALV EKMQDGTEKE EDDDFFKQGR KQTEDRLQKA
901: LARVKSMVQY PEARDQYRRL LNVVNDIQES KVEKALENSE ATCFDDDDDL IDIEALLEDD DTLMLPMSSS LWTS

Arabidopsis Description

CAMTA3Calmodulin-binding transcription activator 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8GSA7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.