Factsheet for Zm00001d028007_P004

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU93088	Sorghum	mitochondrion	88.68	91.45
Os03t0191000-01	Rice	nucleus	77.07	76.77
HORVU4Hr1G078620.1	Barley	cytosol	76.2	73.68
TraesCS4B01G306300.4	Wheat	cytosol	76.29	73.29
TraesCS4D01G304500.3	Wheat	cytosol	76.2	73.26
TraesCS4A01G407100.1	Wheat	cytosol	75.71	72.8
Zm00001d014286_P002	Maize	nucleus	72.49	71.65
TraesCS5B01G521100.2	Wheat	cytosol	62.15	71.49
Zm00001d030518_P005	Maize	cytosol	71.61	67.15
Zm00001d043159_P001	Maize	mitochondrion	10.34	57.3
Zm00001d020190_P001	Maize	cytosol, mitochondrion	9.46	55.75
Zm00001d011907_P001	Maize	mitochondrion	6.24	54.7
Zm00001d049671_P001	Maize	mitochondrion	9.56	53.85
GSMUA_Achr6P10390_001	Banana	nucleus	55.71	53.62
Zm00001d050702_P001	Maize	cytosol	9.17	53.11
Zm00001d002681_P001	Maize	cytosol	16.78	51.5
GSMUA_AchrUn_...	Banana	cytosol	44.98	50.27
Zm00001d022185_P003	Maize	nucleus	51.22	50.1
CDX92455	Canola	cytosol	29.76	48.11
CDY13771	Canola	cytosol, nucleus, plastid	43.32	48.05
Solyc04g056270.2.1	Tomato	nucleus	47.8	47.99
Zm00001d028488_P001	Maize	cytosol	12.78	47.99
Bra038534.1-P	Field mustard	nucleus	43.51	47.96
Zm00001d047209_P003	Maize	nucleus	49.76	46.45
CDX76935	Canola	nucleus	42.83	46.36
KRH43177	Soybean	nucleus	49.37	45.92
KRH10541	Soybean	nucleus	48.68	45.86
KRH43898	Soybean	nucleus	48.0	45.51
CDX81217	Canola	nucleus	43.71	45.39
CDY21580	Canola	cytosol, nucleus, plastid	44.0	45.15
Zm00001d039938_P001	Maize	cytosol	12.2	45.13
Solyc01g105230.2.1	Tomato	nucleus	45.66	45.0
KRH42152	Soybean	nucleus	47.32	44.95
KRH59333	Soybean	nucleus	49.17	44.92
AT2G22300.1	Thale cress	cytosol	44.98	44.67
KRH58270	Soybean	nucleus	47.41	44.67
AT5G64220.2	Thale cress	nucleus	45.66	44.57
Bra009382.1-P	Field mustard	nucleus	43.71	44.49
CDX69907	Canola	nucleus	43.71	44.49
CDY25585	Canola	nucleus	42.83	44.34
CDY18719	Canola	cytosol	43.41	43.67
CDX89451	Canola	nucleus	43.71	43.58
Bra030248.1-P	Field mustard	nucleus	43.8	43.55
Bra037769.1-P	Field mustard	cytosol	43.61	43.48
AT5G09410.3	Thale cress	cytosol	43.12	41.46
Zm00001d023435_P001	Maize	cytosol	12.98	39.7
VIT_07s0141g00250.t01	Wine grape	nucleus	49.76	37.69
Zm00001d003958_P013	Maize	nucleus	29.56	30.95
Zm00001d031632_P034	Maize	plasma membrane	14.54	29.86
Zm00001d016518_P008	Maize	plasma membrane	14.54	29.86
Zm00001d009281_P001	Maize	cytosol	5.76	29.8
Zm00001d025235_P004	Maize	nucleus	28.78	29.41
Zm00001d042313_P004	Maize	nucleus	25.56	29.37
Zm00001d021516_P003	Maize	cytosol, nucleus, plasma membrane	23.71	25.1
Zm00001d049403_P001	Maize	cytosol	16.1	24.85
Zm00001d048031_P003	Maize	golgi	19.12	22.05

Protein Annotations

Gene3D:1.20.5.190	Gene3D:1.25.40.20	EntrezGene:103631862	MapMan:15.5.26	Gene3D:2.60.40.10	UniProt:A0A1D6JR86
InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	InterPro:CG-1_dom	ncoils:Coil	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	InterPro:IPR000048	InterPro:IPR002110	InterPro:IPR005559	InterPro:IPR013783
InterPro:IPR020683	InterPro:IPR036770	InterPro:IPT_dom	InterPro:IQ_motif_EF-hand-BS	InterPro:Ig-like_fold	InterPro:Ig_E-set
ProteinID:ONL94465.1	InterPro:P-loop_NTPase	PFAM:PF00612	PFAM:PF01833	PFAM:PF03859	PFscan:PS50088
PFscan:PS50096	PFscan:PS50297	PFscan:PS51437	PANTHER:PTHR23335	PANTHER:PTHR23335:SF7	SMART:SM00015
SMART:SM00248	SMART:SM01076	SUPFAM:SSF48403	SUPFAM:SSF52540	SUPFAM:SSF81296	UniParc:UPI0002219BEC
EnsemblPlantsGene:Zm00001d028007	EnsemblPlants:Zm00001d028007_P004	EnsemblPlants:Zm00001d028007_T004	SEG:seg	:	:

Description

CAMTA-transcription factor 4Calmodulin-binding transcription activator 2

Coordinates

chr1:-:20105977..20131237

Molecular Weight (calculated)

114424.0 Da

IEP (calculated)

6.379

GRAVY (calculated)

-0.531

Length

1025 amino acids

Sequence
(BLAST)

0001: MAEARRHAVA PQLDIEQILK EAQHRWLRPA EICEILKNYR NFHIAPEPPN RPPSGSLFLF DRKVLRYFRK DGHSWRKKKD GKTVKEAHER LKSGSVDVLH
0101: CYYAHGEGNE NFQRRSYWML EEDFMHIVLV HYLEVKGGKS TSRIRGHDDM LQAARTDSPL SQLPSQTTEG GNSLSGQASE YEETESDIYS GGAGYHPFSW
0201: TQHHENGGGP VIGTSIPSSY VPALPLGNLQ GFPATVTNTD IYSRQDALPV TLNEPGLAIE FNGADNQLDP SSLNGLVKPF LQMSTPQSTV PSELFPFTEE
0301: HGNESFTFHE VYSNGLSIKD AEIVGTNEES VWKLPGAISS IPSEDSFQQN DRSLEETISY PLLKTRSSNL SEMLKDSFKK SDSFTRWMSK ALGEVDSQIK
0401: SSSGVYWNSE ETNNIIETSS CDQLDQCTID PVLAQEQLFS IVDFSPSWTY AGSKTRVLIN GKFLNSAELK RCKWSCMFGE VEVPAEISAD GILRCYSPSH
0501: KPGRVPFYVT CTNRLACSEI REFEFRPSVT QYMDAPSPHG ATNKTYLQMR LDNLLSLGHN EYQATVSNPT KEMVDLSKKI SSLMTDNDSW SQLLKLASDN
0601: EPVTDDDQDE FFEKHLKEKL HIWLVHKASD GGKGPNVLDD EGQGVLHLAA ALGYDWVIRP AVSAGVNINF RDAHGWTALH WAAFCGRERT VVALIALGAA
0701: PGALTDPTPI FPTGSTPADL ASANGYKGIS GFLAESSLTS HLQTLDLKEG KGSNPPEISG LPGIGDVTER RASPLAGEGL QAGSMGDSLG AIRNAAQAAA
0801: RIYQVFRVQS FQRKQAVQYE DDNGAVSDDR AISLLSVKPS KPVQLDPLHA AATRIQNKYR GWKGRKEFLL IRQRIVKIQA HVRGHQVRKH YRKIIWSVGI
0901: VEKIILRWRR KGAGLRGFRS TEGATVGSSS NLIQNKPEDD YDFLQQGRKQ TEERLQKALA RVKSMAQYPD ARDQYQRILT VVTKIQESKA MQEKMLEEST
1001: EMDEGFFMSD FKELWDDDIP MPSWS

Best Arabidopsis Sequence Match ( AT2G22300.1 )
(BLAST)

0001: MAEARRFSPV HELDVGQILS EARHRWLRPP EICEILQNYQ RFQISTEPPT TPSSGSVFMF DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKAGSVDVLH
0101: CYYAHGQDNE NFQRRSYWLL QEELSHIVFV HYLEVKGSRV STSFNRMQRT EDAARSPQET GDALTSEHDG YASCSFNQND HSNHSQTTDS ASVNGFHSPE
0201: LEDAESAYNQ HGSSTAYSHQ ELQQPATGGN LTGFDPYYQI SLTPRDSYQK ELRTIPVTDS SIMVDKSKTI NSPGVTNGLK NRKSIDSQTW EEILGNCGSG
0301: VEALPLQPNS EHEVLDQILE SSFTMQDFAS LQESMVKSQN QELNSGLTSD RTVWFQGQDM ELNAISNLAS NEKAPYLSTM KQHLLHGALG EEGLKKMDSF
0401: NRWMSKELGD VGVIADANES FTQSSSRTYW EEVESEDGSN GHNSRRDMDG YVMSPSLSKE QLFSINDFSP SWAYVGCEVV VFVTGKFLKT REETEIGEWS
0501: CMFGQTEVPA DVISNGILQC VAPMHEAGRV PFYVTCSNRL ACSEVREFEY KVAESQVFDR EADDESTIDI LEARFVKLLC SKSENTSPVS GNDSDLSQLS
0601: EKISLLLFEN DDQLDQMLMN EISQENMKNN LLQEFLKESL HSWLLQKIAE GGKGPSVLDE GGQGVLHFAA SLGYNWALEP TIIAGVSVDF RDVNGWTALH
0701: WAAFFGRERI IGSLIALGAA PGTLTDPNPD FPSGSTPSDL AYANGHKGIA GYLSEYALRA HVSLLSLNDK NAETVEMAPS PSSSSLTDSL TAVRNATQAA
0801: ARIHQVFRAQ SFQKKQLKEF GDKKLGMSEE RALSMLAPKT HKSGRAHSDD SVQAAAIRIQ NKFRGYKGRK DYLITRQRII KIQAHVRGYQ FRKNYRKIIW
0901: SVGVLEKVIL RWRRKGAGLR GFKSEALVEK MQDGTEKEED DDFFKQGRKQ TEDRLQKALA RVKSMVQYPE ARDQYRRLLN VVNDIQESKV EKALENSEAT
1001: CFDDDDDLID IEALLEDDDT LMLPMSSSLW TS

Arabidopsis Description

CAMTA3Calmodulin-binding transcription activator 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8GSA7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.