Factsheet for Zm00001d025235_P004

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d009281_P001	Maize	cytosol	18.84	95.45
Zm00001d003958_P013	Maize	nucleus	88.53	90.7
OQU81398	Sorghum	nucleus	89.93	90.65
Os04t0388500-01	Rice	nucleus	72.98	72.98
HORVU2Hr1G069950.6	Barley	nucleus	70.19	68.75
TraesCS2A01G283800.1	Wheat	nucleus	70.19	68.55
TraesCS2B01G300800.2	Wheat	nucleus	69.79	68.09
TraesCS2D01G282800.6	Wheat	nucleus	69.89	68.06
VIT_14s0036g00610.t01	Wine grape	plastid	8.18	55.41
GSMUA_Achr9P01330_001	Banana	nucleus	54.24	51.32
KRH15615	Soybean	cytosol	16.15	51.1
PGSC0003DMT400084738	Potato	cytosol	31.01	45.47
VIT_01s0010g03850.t01	Wine grape	nucleus	43.67	45.25
Solyc05g015650.2.1	Tomato	nucleus	40.98	43.96
KRH58784	Soybean	nucleus	42.77	43.64
KRH42689	Soybean	cytosol	41.87	43.52
KRH31521	Soybean	nucleus	39.18	43.19
Solyc12g035520.1.1	Tomato	nucleus	40.68	41.93
KRG97392	Soybean	nucleus	40.18	41.89
CDY07431	Canola	nucleus	38.19	39.69
Bra004217.1-P	Field mustard	nucleus	39.08	39.32
Zm00001d011907_P001	Maize	mitochondrion	4.59	39.32
Bra004096.1-P	Field mustard	nucleus	38.09	39.26
CDY28897	Canola	nucleus	38.09	39.14
Bra034007.1-P	Field mustard	nucleus	39.18	38.83
AT1G67310.1	Thale cress	cytosol	39.18	38.68
CDY51184	Canola	nucleus	38.78	37.95
CDY12637	Canola	nucleus	38.98	37.81
Zm00001d042313_P004	Maize	nucleus	33.6	37.78
Zm00001d002681_P001	Maize	cytosol	12.56	37.72
CDY01799	Canola	nucleus	38.48	37.66
Zm00001d043159_P001	Maize	mitochondrion	6.78	36.76
Zm00001d020190_P001	Maize	cytosol, mitochondrion	6.08	35.06
Zm00001d050702_P001	Maize	cytosol	6.18	35.03
Zm00001d049671_P001	Maize	mitochondrion	6.18	34.07
Zm00001d028488_P001	Maize	cytosol	8.77	32.23
CDX96099	Canola	nucleus	38.88	31.0
Zm00001d039938_P001	Maize	cytosol	8.47	30.69
Zm00001d022185_P003	Maize	nucleus	31.41	30.06
Zm00001d028007_P004	Maize	nucleus	29.41	28.78
Zm00001d014286_P002	Maize	nucleus	29.41	28.45
Zm00001d047209_P003	Maize	nucleus	30.81	28.14
Zm00001d030518_P005	Maize	cytosol	29.51	27.08
Zm00001d021516_P003	Maize	cytosol, nucleus, plasma membrane	26.12	27.07
Zm00001d023435_P001	Maize	cytosol	8.77	26.27
Zm00001d016518_P008	Maize	plasma membrane	9.67	19.44
Zm00001d031632_P034	Maize	plasma membrane	9.67	19.44
Zm00001d049403_P001	Maize	cytosol	10.27	15.51
Zm00001d048031_P003	Maize	golgi	13.16	14.85
Bra004218.1-P	Field mustard	nucleus	0.1	0.34

Protein Annotations

Gene3D:1.20.5.190	Gene3D:1.25.40.20	MapMan:15.5.26	Gene3D:2.60.40.10	UniProt:A0A1D6J5M8	ProteinID:AQK43250.1
InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	InterPro:CG-1_dom	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	InterPro:IPR000048	InterPro:IPR002110	InterPro:IPR005559	InterPro:IPR013783	InterPro:IPR020683
InterPro:IPR036770	InterPro:IPT_dom	InterPro:IQ_motif_EF-hand-BS	InterPro:Ig-like_fold	InterPro:P-loop_NTPase	PFAM:PF00612
PFAM:PF01833	PFAM:PF03859	PFAM:PF12796	PFscan:PS50088	PFscan:PS50096	PFscan:PS50297
PFscan:PS51437	PANTHER:PTHR23335	PANTHER:PTHR23335:SF1	SMART:SM00015	SMART:SM00248	SMART:SM01076
SUPFAM:SSF48403	SUPFAM:SSF52540	UniParc:UPI000843A7DB	EnsemblPlantsGene:Zm00001d025235	EnsemblPlants:Zm00001d025235_P004	EnsemblPlants:Zm00001d025235_T004
SEG:seg	:	:	:	:	:

Description

CAMTA-transcription factor 5Calmodulin-binding transcription activator 4

Coordinates

chr10:+:110432656..110441915

Molecular Weight (calculated)

112639.0 Da

IEP (calculated)

7.142

GRAVY (calculated)

-0.576

Length

1003 amino acids

Sequence
(BLAST)

0001: MSQSFDINVL REEARSRWLK PSEVYYILQN HERFPITHEA PKKPPSGSLF LYNRRVNRYF RRDGHTWRRK KDGRTVGEAH ERLKVGNVDA LSCYYAHGEQ
0101: NPSFQRRCFW MLEPAYEHIV LVQYREVDVV RNYSSQLSNG LPEPLSSLGY PNAICGNQYH SSSSGASECS ESHQSYSNLS SVTEVSSYSG NKEYTKNDGG
0201: LLSIPEVGHT CLQQNRTDNG NSKNKSGLNI ALKKIAEQLS LGEDDDDYIF SNQAHSVGGK TRKCVELADS SIFVNKVKLV YWPYSGDNQV KHIQQEGTQK
0301: GLSRNIAPSW EDVLQSSSGL PISSIYQQSD VEYQKNSEYH PPERLDSSDL RIQLAAAKKF LLGPEATVDS PSLNSVLRNR ANCVTDTISA YDSRFGSSLN
0401: PDWQTKTALT FQSNSQGSEI TELFDHGHFE HYSREDTTFS LGQTNKFNIR EISPEWAFSY EITKVIITGD FLCNPSNLGW AVMFGDSEVP AKVVQPGVLL
0501: CHTPLHCSGN LRICITSGNR EVCSEFKDFE FRSKPSSSFT DIAPSSRHLK SSEELLILAK FARMLLSGNG NPEVPDGDPQ SGQCPKLKMD EGLWDRLIEE
0601: LKVGCESPLS SVDWILEELL KSKLQKWLSV KLRGFNGTDS ISKHDQGIIH LISALGYEWA LSSVLSVGVG LNFRDSNGWT ALHWAAYFGR EKMVAALLAA
0701: GASATAVTDP TAQDPVGKTA AFLASEQGHT GLAGYLSEVS LTSYLASLTI EESDVSKGSA EVEAERAVES ISQRSVQLHG GTEDELSMKD SLAAVRNAAQ
0801: AAAHIQNAFR AFSFRKRQQK TARLRDEYGM TQEDIDQLAA ASRSYHQAHA SNGQFYDKAA VSIQKKYKGW KGRKHFLNMR RNAVKIQAHV RGHQVRKKYR
0901: TIVSTVSVLE KVILRWRRKG HGLRGFRAEQ QSMVEAIEED DEEDDDFDDD EAVKIFRRQK VDQAVKEAVS RVLSMVDSTE ARMQYRRMLE EFRQATNWKD
1001: QMK

Best Arabidopsis Sequence Match ( AT1G67310.1 )
(BLAST)

0001: MSSVAEDNSF TCDIATIFVA ICRNPPANPS DSLFQYEIST LYQEAHSRWL KPPEVLFILQ NHESLTLTNT APQRPTSGSL LLFNKRVLKF FRKDGHQWRR
0101: KRDGRAIAEA HERLKVGNAE ALNCYYAHGE QDPTFRRRIY WMLDPEYEHI VLVHYRDVSE REEGQQTGGQ VYQFAPILST QNVSYNQYIG DSSDIYQQSS
0201: TSPGVAEVNS NLEGSASSSE FGQALKMLKE QLSIGDEHVN SVDPHYIQPE SLDSLQFLEY SDIDHLAQPT TVYQRPENNK LERCYGGNFG AQYSAKNDSN
0301: KLERCYGGYV GGAEYHSSNL MLVKNGSGPS GGTGGSGDQG SESWKDVLEA CEASIPLNSE GSTPSSAKGL LAGLQEDSNW SYSNQVDQST FLLPQDLGSF
0401: QLPASYSALV APENNGEYCG MMEDGMKIGL PFEQEMRVTG AHNQKFTIQD ISPDWGYANE TTKVIIIGSF LCDPTESTWS CMFGNAQVPF EIIKEGVIRC
0501: EAPQCGPGKV NLCITSGDGL LCSEIREFEY REKPDTCCPK CSEPQTSDMS TSPNELILLV RFVQTLLSDR SSERKSNLES GNDKLLTKLK ADDDQWRHVI
0601: GTIIDGSASS TSTVDWLLQE LLKDKLDTWL SSRSCDEDYI TCSLSKQEQG IIHMVAGLGF EWAFYPILAH GVNVDFRDIK GWSALHWAAQ FGSEKMVAAL
0701: IASGASAGAV TDPSRQDPNG KTAASIAASN GHKGLAGYLS EVALTNHLSS LTLEETENSK DTAQVQTEKT LNSISEQSPS GNEDQVSLKD TLAAVRNAAQ
0801: AAARIQAAFR AHSFRKRKQR EAALVACLQE YGMYCEDIEG ISAMSKLTFG KGRNYNSAAL SIQKNFRGYK DRKCFLELRQ KVVKIQAHVR GYQIRKNYKV
0901: ICWAVRILDK VVLRWRRKGV GLRGFRQDVE STEDSEDEDI LKVFRKQKVD VAVNEAFSRV LSMSNSPEAR QQYHRVLKRY CQTKAELGKT ETLVGEDDDG
1001: LFDIADMEYD TLFSLP

Arabidopsis Description

CAMTA4Calmodulin-binding transcription activator 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYG2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.