Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU81398 | Sorghum | nucleus | 93.87 | 92.36 |
| Zm00001d025235_P004 | Maize | nucleus | 90.7 | 88.53 |
| Zm00001d009281_P001 | Maize | cytosol | 17.36 | 85.86 |
| Os04t0388500-01 | Rice | nucleus | 76.1 | 74.28 |
| TraesCS2A01G283800.1 | Wheat | nucleus | 73.54 | 70.11 |
| HORVU2Hr1G069950.6 | Barley | nucleus | 72.93 | 69.73 |
| TraesCS2D01G282800.6 | Wheat | nucleus | 73.14 | 69.51 |
| TraesCS2B01G300800.2 | Wheat | nucleus | 72.93 | 69.46 |
| VIT_14s0036g00610.t01 | Wine grape | plastid | 8.17 | 54.05 |
| GSMUA_Achr9P01330_001 | Banana | nucleus | 56.69 | 52.36 |
| KRH15615 | Soybean | cytosol | 16.45 | 50.79 |
| VIT_01s0010g03850.t01 | Wine grape | nucleus | 45.66 | 46.18 |
| PGSC0003DMT400084738 | Potato | cytosol | 31.97 | 45.76 |
| Solyc05g015650.2.1 | Tomato | nucleus | 42.29 | 44.28 |
| KRH58784 | Soybean | nucleus | 44.33 | 44.15 |
| KRH42689 | Soybean | cytosol | 43.41 | 44.04 |
| KRH31521 | Soybean | nucleus | 40.86 | 43.96 |
| KRG97392 | Soybean | nucleus | 41.68 | 42.41 |
| Solyc12g035520.1.1 | Tomato | nucleus | 41.68 | 41.93 |
| CDY07431 | Canola | nucleus | 38.82 | 39.38 |
| Zm00001d011907_P001 | Maize | mitochondrion | 4.7 | 39.32 |
| Bra034007.1-P | Field mustard | nucleus | 40.55 | 39.23 |
| Bra004096.1-P | Field mustard | nucleus | 38.82 | 39.05 |
| Bra004217.1-P | Field mustard | nucleus | 39.73 | 39.02 |
| CDY28897 | Canola | nucleus | 38.71 | 38.83 |
| Zm00001d042313_P004 | Maize | nucleus | 35.24 | 38.68 |
| AT1G67310.1 | Thale cress | cytosol | 40.04 | 38.58 |
| CDY51184 | Canola | nucleus | 40.25 | 38.44 |
| CDY12637 | Canola | nucleus | 40.25 | 38.1 |
| Zm00001d002681_P001 | Maize | cytosol | 12.87 | 37.72 |
| CDY01799 | Canola | nucleus | 39.33 | 37.56 |
| Zm00001d043159_P001 | Maize | mitochondrion | 6.95 | 36.76 |
| Zm00001d020190_P001 | Maize | cytosol, mitochondrion | 6.23 | 35.06 |
| Zm00001d050702_P001 | Maize | cytosol | 6.33 | 35.03 |
| Zm00001d049671_P001 | Maize | mitochondrion | 6.33 | 34.07 |
| Zm00001d028488_P001 | Maize | cytosol | 8.78 | 31.5 |
| CDX96099 | Canola | nucleus | 39.43 | 30.68 |
| Zm00001d022185_P003 | Maize | nucleus | 32.18 | 30.06 |
| Zm00001d028007_P004 | Maize | nucleus | 30.95 | 29.56 |
| Zm00001d039938_P001 | Maize | cytosol | 8.27 | 29.24 |
| Zm00001d014286_P002 | Maize | nucleus | 30.34 | 28.64 |
| Zm00001d047209_P003 | Maize | nucleus | 31.46 | 28.05 |
| Zm00001d030518_P005 | Maize | cytosol | 30.34 | 27.17 |
| Zm00001d021516_P003 | Maize | cytosol, nucleus, plasma membrane | 26.46 | 26.76 |
| Zm00001d023435_P001 | Maize | cytosol | 8.89 | 25.97 |
| Zm00001d016518_P008 | Maize | plasma membrane | 9.91 | 19.44 |
| Zm00001d031632_P034 | Maize | plasma membrane | 9.91 | 19.44 |
| Zm00001d049403_P001 | Maize | cytosol | 10.42 | 15.36 |
| Zm00001d048031_P003 | Maize | golgi | 13.69 | 15.07 |
| Bra004218.1-P | Field mustard | nucleus | 0.2 | 0.68 |
Protein Annotations
| Gene3D:1.20.5.190 | Gene3D:1.25.40.20 | MapMan:15.5.26 | Gene3D:2.60.40.10 | UniProt:A0A1D6ECQ6 | InterPro:Ankyrin_rpt |
| InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | InterPro:CG-1_dom | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| InterPro:IPR000048 | InterPro:IPR002110 | InterPro:IPR005559 | InterPro:IPR013783 | InterPro:IPR020683 | InterPro:IPR036770 |
| InterPro:IPT_dom | InterPro:IQ_motif_EF-hand-BS | InterPro:Ig-like_fold | ProteinID:ONM18086.1 | InterPro:P-loop_NTPase | PFAM:PF00612 |
| PFAM:PF01833 | PFAM:PF03859 | PFAM:PF12796 | PFscan:PS50088 | PFscan:PS50096 | PFscan:PS50297 |
| PFscan:PS51437 | PANTHER:PTHR23335 | PANTHER:PTHR23335:SF1 | SMART:SM00015 | SMART:SM00248 | SMART:SM01076 |
| SUPFAM:SSF48403 | SUPFAM:SSF52540 | UniParc:UPI0008454341 | EnsemblPlantsGene:Zm00001d003958 | EnsemblPlants:Zm00001d003958_P013 | EnsemblPlants:Zm00001d003958_T013 |
| SEG:seg | : | : | : | : | : |
Description
CAMTA-transcription factor 1Calmodulin-binding transcription activator 4
Coordinates
chr2:-:72203336..72211337
Molecular Weight (calculated)
110432.0 Da
IEP (calculated)
6.996
GRAVY (calculated)
-0.636
Length
979 amino acids
Sequence
(BLAST)
(BLAST)
001: MSQSFDINVL REEARSRWLK PSEVYYILQN HERFPITHEA PKKPPSGSLF LYNRRVNRYF RRDGHTWRRK KDGRTVGEAH ERLKVGNVDS LSCYYAHGEQ
101: NPCFQRRCFW MLEPAYEHIV LVQYREVAEG RYYSSQLSNG PPEPLSSLGY PNAICGNQYH RSTSGTSEGS ESHQSYSNLS SVTEVSSYSG NKEYNKNDGS
201: LLSIPEVGHT CQQNQTGNGN SKNKSELNMA LKKIAEQLSL GEDDDDDYIY SNQTHSMGGD NQIKQIRQEG TQKGLSRNIA PSWEDVLHSS SGLPTSSIYQ
301: QSDVKYQKKS EYQPPEILDS SDLRIQLSAT KRFLLGPEAS IDSPSLNSVL RNRVNSVTDT ISAYDSRFES SLNPDWQTKT ALTFQSNSQG SEITELFDHD
401: HFEPYSREDT TISLGQTNKF NIREVSPEWA FSYEITKVII TGDFLCDPSN LCWAVMFGDN EVPVEIVQPG VLRCHTPLHS NGNLRICITS GNREVCSEFK
501: DFEFRSKPTS SSFTDIAPSS RHLKSSEELL LLAKFARMLL SGNGNREVPD GDPQSGQCPK LKTNEELWDR LINELKVGCE NPLSSVDWIV EQLLKSNLQQ
601: WLSVKLRGFN GTDFLSKQEQ GIIHLISALG YEWALSPVLS AGVGLNFRDS NGWTALHWAA YFGREKMVAA LLAAGASATA VTDPTAQDPV GKTAAFLASE
701: RGHTGLAGYL SEVSLTSYLA SLTIEESDVS KGSAEVEAER AVEGISQRNA QRHGGTEDEL SMKDSLAAVR NAAQAAARIQ NAFRAFSFRK RQQKTARLRD
801: VYGMTQEDID ELAAASRLYH QAHASSGQFY DRAAVSIQKK YKGWKGRKHF LNMRRNAVKI QAHVRGHQVR KKYRTIVSTV SVLEKVILRW RRKGHGLRGF
901: RAEQQPMVEA IEEDDEEDDD FDDDEAVKVF RRQKVDQAVK EAVSRVLSMV DSTEARMQYR RMLEEFRQAT VRSFFPLNV
101: NPCFQRRCFW MLEPAYEHIV LVQYREVAEG RYYSSQLSNG PPEPLSSLGY PNAICGNQYH RSTSGTSEGS ESHQSYSNLS SVTEVSSYSG NKEYNKNDGS
201: LLSIPEVGHT CQQNQTGNGN SKNKSELNMA LKKIAEQLSL GEDDDDDYIY SNQTHSMGGD NQIKQIRQEG TQKGLSRNIA PSWEDVLHSS SGLPTSSIYQ
301: QSDVKYQKKS EYQPPEILDS SDLRIQLSAT KRFLLGPEAS IDSPSLNSVL RNRVNSVTDT ISAYDSRFES SLNPDWQTKT ALTFQSNSQG SEITELFDHD
401: HFEPYSREDT TISLGQTNKF NIREVSPEWA FSYEITKVII TGDFLCDPSN LCWAVMFGDN EVPVEIVQPG VLRCHTPLHS NGNLRICITS GNREVCSEFK
501: DFEFRSKPTS SSFTDIAPSS RHLKSSEELL LLAKFARMLL SGNGNREVPD GDPQSGQCPK LKTNEELWDR LINELKVGCE NPLSSVDWIV EQLLKSNLQQ
601: WLSVKLRGFN GTDFLSKQEQ GIIHLISALG YEWALSPVLS AGVGLNFRDS NGWTALHWAA YFGREKMVAA LLAAGASATA VTDPTAQDPV GKTAAFLASE
701: RGHTGLAGYL SEVSLTSYLA SLTIEESDVS KGSAEVEAER AVEGISQRNA QRHGGTEDEL SMKDSLAAVR NAAQAAARIQ NAFRAFSFRK RQQKTARLRD
801: VYGMTQEDID ELAAASRLYH QAHASSGQFY DRAAVSIQKK YKGWKGRKHF LNMRRNAVKI QAHVRGHQVR KKYRTIVSTV SVLEKVILRW RRKGHGLRGF
901: RAEQQPMVEA IEEDDEEDDD FDDDEAVKVF RRQKVDQAVK EAVSRVLSMV DSTEARMQYR RMLEEFRQAT VRSFFPLNV
0001: MSSVAEDNSF TCDIATIFVA ICRNPPANPS DSLFQYEIST LYQEAHSRWL KPPEVLFILQ NHESLTLTNT APQRPTSGSL LLFNKRVLKF FRKDGHQWRR
0101: KRDGRAIAEA HERLKVGNAE ALNCYYAHGE QDPTFRRRIY WMLDPEYEHI VLVHYRDVSE REEGQQTGGQ VYQFAPILST QNVSYNQYIG DSSDIYQQSS
0201: TSPGVAEVNS NLEGSASSSE FGQALKMLKE QLSIGDEHVN SVDPHYIQPE SLDSLQFLEY SDIDHLAQPT TVYQRPENNK LERCYGGNFG AQYSAKNDSN
0301: KLERCYGGYV GGAEYHSSNL MLVKNGSGPS GGTGGSGDQG SESWKDVLEA CEASIPLNSE GSTPSSAKGL LAGLQEDSNW SYSNQVDQST FLLPQDLGSF
0401: QLPASYSALV APENNGEYCG MMEDGMKIGL PFEQEMRVTG AHNQKFTIQD ISPDWGYANE TTKVIIIGSF LCDPTESTWS CMFGNAQVPF EIIKEGVIRC
0501: EAPQCGPGKV NLCITSGDGL LCSEIREFEY REKPDTCCPK CSEPQTSDMS TSPNELILLV RFVQTLLSDR SSERKSNLES GNDKLLTKLK ADDDQWRHVI
0601: GTIIDGSASS TSTVDWLLQE LLKDKLDTWL SSRSCDEDYI TCSLSKQEQG IIHMVAGLGF EWAFYPILAH GVNVDFRDIK GWSALHWAAQ FGSEKMVAAL
0701: IASGASAGAV TDPSRQDPNG KTAASIAASN GHKGLAGYLS EVALTNHLSS LTLEETENSK DTAQVQTEKT LNSISEQSPS GNEDQVSLKD TLAAVRNAAQ
0801: AAARIQAAFR AHSFRKRKQR EAALVACLQE YGMYCEDIEG ISAMSKLTFG KGRNYNSAAL SIQKNFRGYK DRKCFLELRQ KVVKIQAHVR GYQIRKNYKV
0901: ICWAVRILDK VVLRWRRKGV GLRGFRQDVE STEDSEDEDI LKVFRKQKVD VAVNEAFSRV LSMSNSPEAR QQYHRVLKRY CQTKAELGKT ETLVGEDDDG
1001: LFDIADMEYD TLFSLP
0101: KRDGRAIAEA HERLKVGNAE ALNCYYAHGE QDPTFRRRIY WMLDPEYEHI VLVHYRDVSE REEGQQTGGQ VYQFAPILST QNVSYNQYIG DSSDIYQQSS
0201: TSPGVAEVNS NLEGSASSSE FGQALKMLKE QLSIGDEHVN SVDPHYIQPE SLDSLQFLEY SDIDHLAQPT TVYQRPENNK LERCYGGNFG AQYSAKNDSN
0301: KLERCYGGYV GGAEYHSSNL MLVKNGSGPS GGTGGSGDQG SESWKDVLEA CEASIPLNSE GSTPSSAKGL LAGLQEDSNW SYSNQVDQST FLLPQDLGSF
0401: QLPASYSALV APENNGEYCG MMEDGMKIGL PFEQEMRVTG AHNQKFTIQD ISPDWGYANE TTKVIIIGSF LCDPTESTWS CMFGNAQVPF EIIKEGVIRC
0501: EAPQCGPGKV NLCITSGDGL LCSEIREFEY REKPDTCCPK CSEPQTSDMS TSPNELILLV RFVQTLLSDR SSERKSNLES GNDKLLTKLK ADDDQWRHVI
0601: GTIIDGSASS TSTVDWLLQE LLKDKLDTWL SSRSCDEDYI TCSLSKQEQG IIHMVAGLGF EWAFYPILAH GVNVDFRDIK GWSALHWAAQ FGSEKMVAAL
0701: IASGASAGAV TDPSRQDPNG KTAASIAASN GHKGLAGYLS EVALTNHLSS LTLEETENSK DTAQVQTEKT LNSISEQSPS GNEDQVSLKD TLAAVRNAAQ
0801: AAARIQAAFR AHSFRKRKQR EAALVACLQE YGMYCEDIEG ISAMSKLTFG KGRNYNSAAL SIQKNFRGYK DRKCFLELRQ KVVKIQAHVR GYQIRKNYKV
0901: ICWAVRILDK VVLRWRRKGV GLRGFRQDVE STEDSEDEDI LKVFRKQKVD VAVNEAFSRV LSMSNSPEAR QQYHRVLKRY CQTKAELGKT ETLVGEDDDG
1001: LFDIADMEYD TLFSLP
Arabidopsis Description
CAMTA4Calmodulin-binding transcription activator 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYG2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.