Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07431 | Canola | nucleus | 88.42 | 89.43 |
| CDY51184 | Canola | nucleus | 76.02 | 72.39 |
| CDY12637 | Canola | nucleus | 75.82 | 71.57 |
| CDY01799 | Canola | nucleus | 71.31 | 67.9 |
| AT1G67310.1 | Thale cress | cytosol | 69.47 | 66.73 |
| VIT_14s0036g00610.t01 | Wine grape | plastid | 8.5 | 56.08 |
| CDX96099 | Canola | nucleus | 72.13 | 55.96 |
| CDX96915 | Canola | nucleus | 4.41 | 54.43 |
| GSMUA_AchrUn_... | Banana | cytosol | 5.64 | 53.92 |
| PGSC0003DMT400084738 | Potato | cytosol | 36.89 | 52.63 |
| VIT_01s0010g03850.t01 | Wine grape | nucleus | 49.59 | 50.0 |
| Solyc05g015650.2.1 | Tomato | nucleus | 47.44 | 49.52 |
| KRH58784 | Soybean | nucleus | 49.69 | 49.34 |
| KRH42689 | Soybean | cytosol | 48.67 | 49.22 |
| Solyc12g035520.1.1 | Tomato | nucleus | 46.21 | 46.35 |
| GSMUA_Achr8P00680_001 | Banana | mitochondrion | 6.56 | 46.04 |
| CDY61797 | Canola | nucleus | 4.82 | 41.96 |
| Os04t0388500-01 | Rice | nucleus | 40.78 | 39.68 |
| OQU81398 | Sorghum | nucleus | 39.86 | 39.1 |
| TraesCS2B01G300800.2 | Wheat | nucleus | 40.78 | 38.72 |
| Zm00001d003958_P013 | Maize | nucleus | 38.83 | 38.71 |
| TraesCS2A01G283800.1 | Wheat | nucleus | 40.57 | 38.56 |
| EES01985 | Sorghum | nucleus | 33.3 | 38.46 |
| HORVU2Hr1G069950.6 | Barley | nucleus | 40.27 | 38.38 |
| TraesCS2D01G282800.6 | Wheat | nucleus | 40.47 | 38.35 |
| Zm00001d025235_P004 | Maize | nucleus | 39.14 | 38.09 |
| Zm00001d009281_P001 | Maize | cytosol | 7.68 | 37.88 |
| TraesCS3B01G469100.2 | Wheat | cytosol | 29.51 | 35.78 |
| Os01t0923600-02 | Rice | nucleus | 32.17 | 35.76 |
| TraesCS3D01G426700.5 | Wheat | nucleus | 29.61 | 35.33 |
| Zm00001d042313_P004 | Maize | nucleus | 32.07 | 35.09 |
| TraesCS3A01G433300.2 | Wheat | nucleus | 29.1 | 34.59 |
| HORVU3Hr1G094860.7 | Barley | cytosol, nucleus, plastid | 29.92 | 34.56 |
| CDX92455 | Canola | cytosol | 20.49 | 31.55 |
| CDY13771 | Canola | cytosol, nucleus, plastid | 29.51 | 31.17 |
| CDX76935 | Canola | nucleus | 29.61 | 30.52 |
| CDY25585 | Canola | nucleus | 29.92 | 29.49 |
| CDY45590 | Canola | cytosol | 9.12 | 28.99 |
| CDX89451 | Canola | nucleus | 30.43 | 28.89 |
| CDX81217 | Canola | nucleus | 29.0 | 28.67 |
| CDX81478 | Canola | nucleus | 4.61 | 28.66 |
| CDY21580 | Canola | cytosol, nucleus, plastid | 29.0 | 28.33 |
| CDX69907 | Canola | nucleus | 29.0 | 28.1 |
| CDY18719 | Canola | cytosol | 28.79 | 27.58 |
| CDX95894 | Canola | cytosol | 23.57 | 26.96 |
| CDX92108 | Canola | cytosol | 23.46 | 26.85 |
| CDY22778 | Canola | nucleus | 24.69 | 26.22 |
| CDY58036 | Canola | nucleus | 24.69 | 26.22 |
| CDY69566 | Canola | nucleus | 7.17 | 25.64 |
Protein Annotations
| Gene3D:1.20.5.190 | Gene3D:1.25.40.20 | MapMan:15.5.26 | Gene3D:2.60.40.10 | GO:A0A078GUX0 | UniProt:A0A078GUX0 |
| InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | EnsemblPlants:CDY28897 | ProteinID:CDY28897 | ProteinID:CDY28897.1 |
| InterPro:CG-1_dom | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00041588001 | InterPro:IPR000048 |
| InterPro:IPR002110 | InterPro:IPR005559 | InterPro:IPR013783 | InterPro:IPR020683 | InterPro:IPR036770 | InterPro:IPT_dom |
| InterPro:IQ_motif_EF-hand-BS | InterPro:Ig-like_fold | InterPro:Ig_E-set | InterPro:P-loop_NTPase | PFAM:PF00612 | PFAM:PF01833 |
| PFAM:PF03859 | PFAM:PF12796 | PFscan:PS50088 | PFscan:PS50096 | PFscan:PS50297 | PFscan:PS51437 |
| PANTHER:PTHR23335 | PANTHER:PTHR23335:SF1 | SMART:SM00015 | SMART:SM00248 | SMART:SM01076 | SUPFAM:SSF48403 |
| SUPFAM:SSF52540 | SUPFAM:SSF81296 | UniParc:UPI0004EE1E62 | SEG:seg | : | : |
Description
BnaC06g26850DBnaC06g26850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GUX0]
Coordinates
chrLK032227:+:491054..496306
Molecular Weight (calculated)
108573.0 Da
IEP (calculated)
5.954
GRAVY (calculated)
-0.584
Length
976 amino acids
Sequence
(BLAST)
(BLAST)
001: MHSEYEIRTL NQEAQTRWLK PPEVYFILKN HDRYELTHKA PHKPTSGSLC LFNKRVLKFF RKDGHHWRKK RDGRAIAEAH ERLKVGNVEA LNCYYAHGEH
101: DPSFQRRIFW MLDLEYDHIV LVHYRDVSDK KEGKQSSGTV LQFSLNPSAL FSSPSYSHHI GDSSTDVQQQ HSEEGSGSSY EAIKRLEEQL SLGDDNNVVQ
201: NESLDGLQFL DFSTDVDHLV PPPATVHQRP ESSSKLGRCY GGYVGSQYNN VTTVGPPLYS QNESLDSLLS LEYIKDMNQL AQPAAGQQRP ESNRLDRSFG
301: GYIGTEYHPN NLMLLNNGSG GSGGSGDQKT GSWKDVLEAC GASIALNSQG STPSQANGLL PVITQEDSNW DYGNQADQGT LLLPQELDSS LQLPPCYSEL
401: VAPENNGDHS RLMVDEEQTG PPLEQVMNDT VAYNQKFTIQ DISPEWGYAN ETTKVIIIGS FLCDPTESTW ACMFGNAQVP FEIIKEGVIR CQAPPCGPGK
501: VNLCITSGDG LSCSQIIEFE YRDKPDDRSC PKSSPDELLL LVKFVQTLLL DRKGNIEPST DDDEWRRIID RIRDGTSTSS STVDWLLQEL LKDKLEAWLS
601: SRSQDKDQTS CSLSKQEQGI IHMVAGLGFD WALSPILGHG VSVDFRDGNG WSALHWAAQL GSEKMVAALI ASGASAGAVT DPNTQDPVGK TPASIAASNG
701: HKGLAGYLSE VALTTHLSSL TLEETESSKE SAQAEAEITV KSIAGRSHPV NDDPQSLAAL KNAAEAAARI QAAFRAHSFR KRQQKADMYA CLKEYGMYGD
801: MSKQNARNYH SAALSIQKKY RGYKGRKEFL TKRQKAVMIQ AHVRGYQTRK QYKVICWAVG MLDKVILRWR RKGVGLKGFR QDVESGEDSE DEDILRVFRK
901: QKVDGAVNEA FSRVMSMTRT LEARQQYHRV LTTYCKKKAE LGKTETLGIG GSGDYEDDDA LFDIADMEYD HLFSLP
101: DPSFQRRIFW MLDLEYDHIV LVHYRDVSDK KEGKQSSGTV LQFSLNPSAL FSSPSYSHHI GDSSTDVQQQ HSEEGSGSSY EAIKRLEEQL SLGDDNNVVQ
201: NESLDGLQFL DFSTDVDHLV PPPATVHQRP ESSSKLGRCY GGYVGSQYNN VTTVGPPLYS QNESLDSLLS LEYIKDMNQL AQPAAGQQRP ESNRLDRSFG
301: GYIGTEYHPN NLMLLNNGSG GSGGSGDQKT GSWKDVLEAC GASIALNSQG STPSQANGLL PVITQEDSNW DYGNQADQGT LLLPQELDSS LQLPPCYSEL
401: VAPENNGDHS RLMVDEEQTG PPLEQVMNDT VAYNQKFTIQ DISPEWGYAN ETTKVIIIGS FLCDPTESTW ACMFGNAQVP FEIIKEGVIR CQAPPCGPGK
501: VNLCITSGDG LSCSQIIEFE YRDKPDDRSC PKSSPDELLL LVKFVQTLLL DRKGNIEPST DDDEWRRIID RIRDGTSTSS STVDWLLQEL LKDKLEAWLS
601: SRSQDKDQTS CSLSKQEQGI IHMVAGLGFD WALSPILGHG VSVDFRDGNG WSALHWAAQL GSEKMVAALI ASGASAGAVT DPNTQDPVGK TPASIAASNG
701: HKGLAGYLSE VALTTHLSSL TLEETESSKE SAQAEAEITV KSIAGRSHPV NDDPQSLAAL KNAAEAAARI QAAFRAHSFR KRQQKADMYA CLKEYGMYGD
801: MSKQNARNYH SAALSIQKKY RGYKGRKEFL TKRQKAVMIQ AHVRGYQTRK QYKVICWAVG MLDKVILRWR RKGVGLKGFR QDVESGEDSE DEDILRVFRK
901: QKVDGAVNEA FSRVMSMTRT LEARQQYHRV LTTYCKKKAE LGKTETLGIG GSGDYEDDDA LFDIADMEYD HLFSLP
0001: MSSVAEDNSF TCDIATIFVA ICRNPPANPS DSLFQYEIST LYQEAHSRWL KPPEVLFILQ NHESLTLTNT APQRPTSGSL LLFNKRVLKF FRKDGHQWRR
0101: KRDGRAIAEA HERLKVGNAE ALNCYYAHGE QDPTFRRRIY WMLDPEYEHI VLVHYRDVSE REEGQQTGGQ VYQFAPILST QNVSYNQYIG DSSDIYQQSS
0201: TSPGVAEVNS NLEGSASSSE FGQALKMLKE QLSIGDEHVN SVDPHYIQPE SLDSLQFLEY SDIDHLAQPT TVYQRPENNK LERCYGGNFG AQYSAKNDSN
0301: KLERCYGGYV GGAEYHSSNL MLVKNGSGPS GGTGGSGDQG SESWKDVLEA CEASIPLNSE GSTPSSAKGL LAGLQEDSNW SYSNQVDQST FLLPQDLGSF
0401: QLPASYSALV APENNGEYCG MMEDGMKIGL PFEQEMRVTG AHNQKFTIQD ISPDWGYANE TTKVIIIGSF LCDPTESTWS CMFGNAQVPF EIIKEGVIRC
0501: EAPQCGPGKV NLCITSGDGL LCSEIREFEY REKPDTCCPK CSEPQTSDMS TSPNELILLV RFVQTLLSDR SSERKSNLES GNDKLLTKLK ADDDQWRHVI
0601: GTIIDGSASS TSTVDWLLQE LLKDKLDTWL SSRSCDEDYI TCSLSKQEQG IIHMVAGLGF EWAFYPILAH GVNVDFRDIK GWSALHWAAQ FGSEKMVAAL
0701: IASGASAGAV TDPSRQDPNG KTAASIAASN GHKGLAGYLS EVALTNHLSS LTLEETENSK DTAQVQTEKT LNSISEQSPS GNEDQVSLKD TLAAVRNAAQ
0801: AAARIQAAFR AHSFRKRKQR EAALVACLQE YGMYCEDIEG ISAMSKLTFG KGRNYNSAAL SIQKNFRGYK DRKCFLELRQ KVVKIQAHVR GYQIRKNYKV
0901: ICWAVRILDK VVLRWRRKGV GLRGFRQDVE STEDSEDEDI LKVFRKQKVD VAVNEAFSRV LSMSNSPEAR QQYHRVLKRY CQTKAELGKT ETLVGEDDDG
1001: LFDIADMEYD TLFSLP
0101: KRDGRAIAEA HERLKVGNAE ALNCYYAHGE QDPTFRRRIY WMLDPEYEHI VLVHYRDVSE REEGQQTGGQ VYQFAPILST QNVSYNQYIG DSSDIYQQSS
0201: TSPGVAEVNS NLEGSASSSE FGQALKMLKE QLSIGDEHVN SVDPHYIQPE SLDSLQFLEY SDIDHLAQPT TVYQRPENNK LERCYGGNFG AQYSAKNDSN
0301: KLERCYGGYV GGAEYHSSNL MLVKNGSGPS GGTGGSGDQG SESWKDVLEA CEASIPLNSE GSTPSSAKGL LAGLQEDSNW SYSNQVDQST FLLPQDLGSF
0401: QLPASYSALV APENNGEYCG MMEDGMKIGL PFEQEMRVTG AHNQKFTIQD ISPDWGYANE TTKVIIIGSF LCDPTESTWS CMFGNAQVPF EIIKEGVIRC
0501: EAPQCGPGKV NLCITSGDGL LCSEIREFEY REKPDTCCPK CSEPQTSDMS TSPNELILLV RFVQTLLSDR SSERKSNLES GNDKLLTKLK ADDDQWRHVI
0601: GTIIDGSASS TSTVDWLLQE LLKDKLDTWL SSRSCDEDYI TCSLSKQEQG IIHMVAGLGF EWAFYPILAH GVNVDFRDIK GWSALHWAAQ FGSEKMVAAL
0701: IASGASAGAV TDPSRQDPNG KTAASIAASN GHKGLAGYLS EVALTNHLSS LTLEETENSK DTAQVQTEKT LNSISEQSPS GNEDQVSLKD TLAAVRNAAQ
0801: AAARIQAAFR AHSFRKRKQR EAALVACLQE YGMYCEDIEG ISAMSKLTFG KGRNYNSAAL SIQKNFRGYK DRKCFLELRQ KVVKIQAHVR GYQIRKNYKV
0901: ICWAVRILDK VVLRWRRKGV GLRGFRQDVE STEDSEDEDI LKVFRKQKVD VAVNEAFSRV LSMSNSPEAR QQYHRVLKRY CQTKAELGKT ETLVGEDDDG
1001: LFDIADMEYD TLFSLP
Arabidopsis Description
CAMTA4Calmodulin-binding transcription activator 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYG2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.