Factsheet for GSMUA_AchrUn_randomP00950_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
nucleus 2
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P00680_001	Banana	mitochondrion	70.59	51.8
GSMUA_Achr5P21200_001	Banana	cytosol	40.2	27.89
GSMUA_AchrUn_...	Banana	nucleus	54.9	24.45
GSMUA_Achr3P21310_001	Banana	nucleus	54.9	23.43
GSMUA_AchrUn_...	Banana	nucleus	50.98	22.41
GSMUA_Achr1P21540_001	Banana	nucleus	51.96	21.81
GSMUA_Achr8P09270_001	Banana	endoplasmic reticulum, nucleus	76.47	6.9
VIT_01s0010g03850.t01	Wine grape	nucleus	60.78	6.4
Solyc05g015650.2.1	Tomato	nucleus	56.86	6.2
Solyc12g035520.1.1	Tomato	nucleus	54.9	5.76
Bra004096.1-P	Field mustard	nucleus	53.92	5.65
CDY28897	Canola	nucleus	53.92	5.64
CDY07431	Canola	nucleus	52.94	5.6
GSMUA_Achr9P01330_001	Banana	nucleus	57.84	5.57
Bra034007.1-P	Field mustard	nucleus	54.9	5.53
CDY12637	Canola	nucleus	53.92	5.32
GSMUA_Achr3P08460_001	Banana	nucleus	50.98	5.31
AT1G67310.1	Thale cress	cytosol	51.96	5.22
CDY51184	Canola	nucleus	51.96	5.17
GSMUA_Achr6P10390_001	Banana	nucleus	53.92	5.16
Bra004217.1-P	Field mustard	nucleus	49.02	5.02
CDY01799	Canola	nucleus	49.02	4.88
GSMUA_Achr8P10490_001	Banana	cytosol	34.31	4.18
CDX96099	Canola	nucleus	48.04	3.9
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, golgi	8.82	1.14
GSMUA_Achr8P00690_001	Banana	endoplasmic reticulum	3.92	0.51
GSMUA_Achr5P21190_001	Banana	cytosol	0.0	0.0
GSMUA_AchrUn_...	Banana	cytosol	0.0	0.0
KRH15615	Soybean	cytosol	0.0	0.0
PGSC0003DMT400084738	Potato	cytosol	0.0	0.0
Bra004218.1-P	Field mustard	nucleus	0.0	0.0
VIT_14s0036g00610.t01	Wine grape	plastid	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP00950_001	EnsemblPlants:GSMUA_AchrUn_randomT00950_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG00950_001	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	InterPro:CG-1_dom
InterPro:IPR005559	PANTHER:PTHR23335	PANTHER:PTHR23335:SF1	PFAM:PF03859	PFscan:PS51437	SMART:SM01076
UniParc:UPI0002967D0F	UniProt:M0U5A7	MapMan:35.1	:	:	:

Description

Calmodulin-binding transcription activator 2 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG00950_001]

Coordinates

chrchrUn_random:-:3409862..3410372

Molecular Weight (calculated)

12305.1 Da

IEP (calculated)

11.165

GRAVY (calculated)

-0.542

Length

102 amino acids

Sequence
(BLAST)

001: MVNFVSKITD FDINKLSKET QFRWLKPVEV LFILQNHETF EITQKPPQKP PSGSLFLFNR RVLRYFRNDG HSWRKKRNGK TIREGHERLK VHSVKLLVCF
101: FM

Best Arabidopsis Sequence Match ( AT5G64220.1 )
(BLAST)

0001: MADRGSFGFA PRLDIKQLLS EAQHRWLRPA EICEILRNHQ KFHIASEPPN RPPSGSLFLF DRKVLRYFRK DGHNWRKKKD GKTVKEAHEK LKVGSIDVLH
0101: CYYAHGEDNE NFQRRCYWML EQDLMHIVFV HYLEVKGNRM STSGTKENHS NSLSGTGSVN VDSTATRSSI LSPLCEDADS GDSRQASSSL QQNPEPQTVV
0201: PQIMHHQNAS TINSYNTTSV LGNRDGWTSA HGNRVKGSNS QRSGDVPAWD ASFENSLARY QNLPYNAPLT QTQPSTFGLI PMEGKTEKGS LLTSEHLRNP
0301: LQSQVNWQTP VQESVPLQKW PMDSHSGMTD ATDLALFGQG AHENFGTFSS LLGSQDQQSS SFQAPFTNNE AAYIPKLGPE DLIYEASANQ TLPLRKALLK
0401: KEDSLKKVDS FSRWVSKELG EMEDLQMQSS SGGIAWTSVE CENAAAGSSL SPSLSEDQRF TMIDFWPKWT QTDSEVEVMV IGTFLLSPQE VTSYSWSCMF
0501: GEVEVPADIL VDGVLCCHAP PHEVGRVPFY ITCSDRFSCS EVREFDFLPG STRKLNATDI YGANTIETSL HLRFENLLAL RCSVQEHHIF ENVGEKRRKI
0601: SKIMLLKDEK EPPLPGTIEK DLTELEAKER LIREEFEDKL YLWLIHKVTE EGKGPNILDE DGQGVLHLAA ALGYDWAIKP ILAAGVSINF RDANGWSALH
0701: WAAFSGREDT VAVLVSLGAD AGALADPSPE HPLGKTAADL AYGNGHRGIS GFLAESSLTS YLEKLTVDAK ENSSADSSGA KAVLTVAERT ATPMSYGDVP
0801: ETLSMKDSLT AVLNATQAAD RLHQVFRMQS FQRKQLSELG GDNKFDISDE LAVSFAAAKT KKSGHSSGAV HAAAVQIQKK YRGWKKRKEF LLIRQRIVKI
0901: QAHVRGHQVR KQYRAIIWSV GLLEKIILRW RRKGSGLRGF KRDTISKPTE PVCPAPQEDD YDFLKEGRKQ TEERLQKALT RVKSMAQYPE ARAQYRRLLT
1001: VVEGFRENEA SSSSALKNNT EEAANYNEED DLIDIDSLLD DDTFMSLAFE

Arabidopsis Description

CAMTA2Calmodulin-binding transcription activator 2 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPP4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.