Factsheet for GSMUA_Achr3P08460_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P21310_001	Banana	nucleus	13.07	53.56
GSMUA_AchrUn_...	Banana	cytosol	5.31	50.98
GSMUA_AchrUn_...	Banana	nucleus	11.85	50.66
GSMUA_AchrUn_...	Banana	nucleus	11.95	50.43
VIT_05s0020g00630.t01	Wine grape	nucleus	50.05	48.13
KRH02436	Soybean	nucleus	47.91	46.95
GSMUA_Achr1P21540_001	Banana	nucleus	11.44	46.09
GSMUA_Achr8P00680_001	Banana	mitochondrion	6.44	45.32
GSMUA_Achr5P21200_001	Banana	cytosol	6.64	44.22
Solyc01g057270.2.1	Tomato	nucleus	42.39	43.36
PGSC0003DMT400038758	Potato	cytosol	35.24	42.33
GSMUA_Achr6P10390_001	Banana	nucleus	43.82	40.28
GSMUA_AchrUn_...	Banana	cytosol	33.2	35.44
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, golgi	26.15	32.41
GSMUA_Achr8P00690_001	Banana	endoplasmic reticulum	25.23	31.67
GSMUA_Achr9P01330_001	Banana	nucleus	33.61	31.04
GSMUA_Achr5P21190_001	Banana	cytosol	16.65	30.64
GSMUA_Achr8P10490_001	Banana	cytosol	26.05	30.43
GSMUA_Achr8P09270_001	Banana	endoplasmic reticulum, nucleus	31.05	26.88

Protein Annotations

Gene3D:1.20.5.190	Gene3D:1.25.40.20	MapMan:15.5.26	Gene3D:2.60.40.10	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	InterPro:CG-1_dom	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	EnsemblPlantsGene:GSMUA_Achr3G08460_001
EnsemblPlants:GSMUA_Achr3P08460_001	EnsemblPlants:GSMUA_Achr3T08460_001	InterPro:IPR000048	InterPro:IPR002110	InterPro:IPR005559	InterPro:IPR013783
InterPro:IPR020683	InterPro:IPR036770	InterPro:IPT_dom	InterPro:IQ_motif_EF-hand-BS	InterPro:Ig-like_fold	InterPro:Ig_E-set
UniProt:M0SCW3	InterPro:P-loop_NTPase	PFAM:PF00612	PFAM:PF01833	PFAM:PF03859	PFscan:PS50088
PFscan:PS50096	PFscan:PS50297	PFscan:PS51437	PANTHER:PTHR23335	PANTHER:PTHR23335:SF10	SMART:SM00015
SMART:SM00248	SMART:SM01076	SUPFAM:SSF48403	SUPFAM:SSF52540	SUPFAM:SSF81296	UniParc:UPI000294CE1B
SEG:seg	:	:	:	:	:

Description

Putative Calmodulin-binding transcription activator 1 [Source:GMGC_GENE;Acc:GSMUA_Achr3G08460_001]

Coordinates

chr3:+:6013256..6035863

Molecular Weight (calculated)

109217.0 Da

IEP (calculated)

8.066

GRAVY (calculated)

-0.490

Length

979 amino acids

Sequence
(BLAST)

001: MAEGRRYALN PQLDIAQILQ EAKSRWLRPS EICEILRNYQ RFNLTPDPPY KPPGGSLFLF DRKALRYFRK DGHNWRKKRD GKTVREAHEK LKCGSVDVLH
101: CYYAHGEDNE NFQRRSYWML DGQLEHIVLV HYRDVNEGSR STIPHLLNTD AMRMSHTDGS QTSSAVSPSS EFEDAESGEE HSEASLADSL SHSGIHVASS
201: ANHTGQENVA GCSGSLAHLR SSDSIDTGIL GRLFGPSSAN QVPLQNLILG EDQQKNCSLG GASFDHHTAA SKMPEFFNIS RKDSGMLEEN VSIEQAKWSV
301: NMPKIFPNTT SEGNEVKVEN SENISNLDHG HLVDIPGYMF QVPNTNLSQS TLQTINNGSS KVTVASDQPL SYEAQILYGL KKSLENEGDL KKLDSFGRWM
401: SKEIGPSLSQ EQLFTIHDFS PDWAFSGIET KVLIAGTFLG SVEPRSIKWS CMFGEFEVSA EVLTSNVIRC KAPLHTPGRV PFYITCSNRI ACSEIREFEY
501: RENFSSFSSV PERDLEEVIL QVRFAKLLST GLDRNWLVCS VENCEKCFLK QKLLLMLRDQ ENEWNVIDKD SKAFHSDLRI PKDGLIQKLL KGKLYEWLLC
601: KVHEEGKGPN VLDENGQGAI HLAAALGYEW AMSPIVCAGV SPSFRDVIGR TGLHWAAYFG REETVVELVR LGAAAGAVEH PTSKVPAGKT AADLASSRGH
701: KGIAGYLAEA DLTSHLSSLT VKESEMGRLS ATLAAEKAIE NVQEQNTVSL DGGNGEQLSL RGSLAAVRNS AQAAARIQAA FRLHSFRQRK LTDSKDKDTE
801: ISVDLMVRSY LNKFPKINHY NESLHMAAVK IQQKYRGWKG RKEFLKIRDR IVKIQAHVRG HQVRKQYKKV VWSVSIVEKA ILRWRRKGAG LRGFRAENTT
901: ICIEGKVGAT DEYDFLRLGR RQKVASVEKA LARVQSMARH PEGRDQYMRL VACSRKSKLG DEGGGSAQLQ NTEEENGGG

Best Arabidopsis Sequence Match ( AT5G09410.2 )
(BLAST)

0001: MVDRRSFGSI TPPLQLDMEQ LLSEAQHRWL RPTEICEILQ NYHKFHIASE SPTRPASGSL FLFDRKVLRY FRKDGHNWRK KKDGKTIREA HEKLKVGSID
0101: VLHCYYAHGE ANENFQRRCY WMLEQHLMHI VFVHYLEVKG NRTSIGMKEN NSNSVNGTAS VNIDSTASPT STLSSLCEDA DTGDSQQASS VLRPSPEPQT
0201: GNRYGWTPAP GMRNVSQVHG NRVRESDSQR LVDVRALDTV GNSLTRFHDQ PYCNNLLTQM QPSNTDSMLV EENSEKGGRL KAEHIRNPLQ TQFNWQDDTD
0301: LALFEQSAQD NFETFSSLLG SENLQPFGIS YQAPPSNMDS EYMPVMKILR RSEDSLKKVD SFSKWAIKEL GEMEDLQMQS SRGDIAWTTV ECETAAAGIS
0401: LSPSLSEDQR FTIVDFWPKS AKTDAEVEVM VIGTFLLSPQ EVTKYNWSCM FGEVEVPAEI LVDGVLCCHA PPHTAGHVPF YVTCSNRFAC SEVREFDFLS
0501: GSTQKINATD VYGTYTNEAS LQLRFEKMLA HRDFVHEHHI FEDVGDKRRQ ISKIMLLKEE KEYLLPGTYQ RDSTKQEPKG QLFRELFEEE LYIWLIHKVT
0601: EEGKGPNILD EDGQGILHFV AALGYDWAIK PVLAAGVNIN FRDANGWSAL HWAAFSGREE TVAVLVSLGA DAGALTDPSP ELPLGKTAAD LAYANGHRGI
0701: SGFLAESSLT SYLEKLTVDS KENSPANSCG EKAVQTVSER TAAPMTYGDV PEKLSLKDSL TAVRNATQAA DRLHQVFRMQ SFQRKQLCDI GDDEKIDISD
0801: QLAVSFAASK TKNPGQGDVS LSCAATHIQK KYRGWKKRKE FLLIRQRIVK IQAHVRGHQV RKQYRTVIWS VGLLEKIILR WRRKGNGLRG FKRNAVAKTV
0901: EPEPPVSAIC PRIPQEDEYD YLKEGRKQTE ERLQKALTRV KSMVQYPEAR DQYRRLLTVV EGFRENEASS SASINNKEEE AVNCEEDDFI DIESLLNDDT
1001: LMMSISP

Arabidopsis Description

EICBP.BEthylene induced calmodulin binding protein [Source:UniProtKB/TrEMBL;Acc:F4KCL4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.