Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0805g00010.t01 | Wine grape | cytosol, nucleus, plastid | 3.73 | 63.33 |
| KRH02436 | Soybean | nucleus | 59.23 | 60.36 |
| PGSC0003DMT400038758 | Potato | cytosol | 45.48 | 56.81 |
| Solyc01g057270.2.1 | Tomato | nucleus | 51.57 | 54.86 |
| GSMUA_Achr3P08460_001 | Banana | nucleus | 48.13 | 50.05 |
| VIT_14s0036g00610.t01 | Wine grape | plastid | 5.4 | 37.16 |
| VIT_01s0010g03850.t01 | Wine grape | nucleus | 33.2 | 34.92 |
| VIT_05s0077g01240.t01 | Wine grape | cytosol | 28.88 | 31.72 |
| VIT_07s0141g00250.t01 | Wine grape | nucleus | 40.77 | 30.67 |
Protein Annotations
| Gene3D:1.20.5.190 | Gene3D:1.25.40.20 | EntrezGene:100240779 | wikigene:100240779 | MapMan:15.5.26 | Gene3D:2.60.40.10 |
| InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | ProteinID:CBI25998 | ProteinID:CBI25998.3 | InterPro:CG-1_dom |
| UniProt:D7T677 | EMBL:FN595749 | GO:GO:0001077 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006366 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | GO:GO:0045944 | InterPro:IPR000048 | InterPro:IPR002110 | InterPro:IPR005559 |
| InterPro:IPR013783 | InterPro:IPR020683 | InterPro:IPR036770 | InterPro:IPT_dom | InterPro:IQ_motif_EF-hand-BS | InterPro:Ig-like_fold |
| InterPro:Ig_E-set | EntrezGene:LOC100240779 | wikigene:LOC100240779 | InterPro:P-loop_NTPase | PFAM:PF00612 | PFAM:PF01833 |
| PFAM:PF03859 | PFscan:PS50088 | PFscan:PS50096 | PFscan:PS50297 | PFscan:PS51437 | PANTHER:PTHR23335 |
| PANTHER:PTHR23335:SF10 | SMART:SM00015 | SMART:SM00248 | SMART:SM01076 | SUPFAM:SSF48403 | SUPFAM:SSF52540 |
| SUPFAM:SSF81296 | TIGR:TC63275 | TIGR:TC67559 | UniParc:UPI000198319D | ArrayExpress:VIT_05s0020g00630 | EnsemblPlantsGene:VIT_05s0020g00630 |
| EnsemblPlants:VIT_05s0020g00630.t01 | unigene:Vvi.16349 | RefSeq:XP_002274846 | RefSeq:XP_002274846.1 | RefSeq:XP_010649672.1 | RefSeq:XP_010649674.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr5:-:2509378..2521856
Molecular Weight (calculated)
113018.0 Da
IEP (calculated)
6.901
GRAVY (calculated)
-0.499
Length
1018 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAESRRYVPN QQLDLEQILL EAQHRWLRPT EICEILRNYQ KFLITPDPPV TPPAGSLFLF DRKALRYFRK DGHRWRKKKD GKTVKEAHEK LKAGSVDVLH
0101: CYYAHGEDNE NFQRRSYWML DEQLEHIVLV HYREIKEGYK TSTSVPRLPN AVPASQIGTI QGSSAPCLSQ GNAPTVTGQI SYASSPNTAD WSGQTLSSEF
0201: EDGDSGDDPG TSSLAQPILG SVFYNASLPT HEASGFAGLS RNQLGSGLAG VHFSHGASTS VQDEIHGSSS SVHDQKFGFE QPNGADFITN KLTDARLDSD
0301: RTVQNFAARG DGLSPALDIK GLTAASQRAV QGPLEHNFHL VHPQFQNCSS SHVADTSTAH IENKSKEDGA NNDASGELKK LDSFGRWMDK EIGGDCDDSL
0401: MASDSGNYWN TLDTQNDDKE VSSLSRHMQL DIDSLAPSLS QEQLFTINDF SPDWAYSEDE TKVLIIGTFL GGMEHSTNTK WCCMFGEIEV SAEVLTNNVI
0501: RCHAPLHAPG RVPFYVTCSN RLACSEVREF EYREKPSRVA FSMAVRSTPE DDVQFQIQLA KMLHLGQERK WLDCSIEECD KCKIKSDIYS KKDDIKNDWE
0601: ELEMAKDFIG NHVNPRDVLI KNLLKDRLFE WLVCKVHEGV RGPHVLDGKG QGVIHLAAAL GYEWAMGPII VAGVSPNFRD ARGRTGLHWA SYFGREETVI
0701: ALVKLGTSPD AVEDPTPAFP GGQTAADLAS SRGHKGIAGY LAEAHLSSHL CSLSPSENVM DSVSANIAAE KAAQTAVQNV DGVIEEQLSL KGSLAALRKS
0801: AHAAALIQAA LRARSFRDRR LTRSNDDISE ASLDLVALGS LNKVSKMGHF KDYLHSAAVK IQQKYRGWKG REDFLKIRSR IVKIQAHVRG HQVRKQYKKV
0901: VWSVGIVEKA ILRWRRKGSG LRGFRLEKPI GNAVPEVGKT DEYDYLRVGR RQKFAGVEKA LARVQSMVRH PEARDQYMRL VSKFDNLQIG DEGSSALQQA
1001: EKSEKLIKEE DLGSFIAD
0101: CYYAHGEDNE NFQRRSYWML DEQLEHIVLV HYREIKEGYK TSTSVPRLPN AVPASQIGTI QGSSAPCLSQ GNAPTVTGQI SYASSPNTAD WSGQTLSSEF
0201: EDGDSGDDPG TSSLAQPILG SVFYNASLPT HEASGFAGLS RNQLGSGLAG VHFSHGASTS VQDEIHGSSS SVHDQKFGFE QPNGADFITN KLTDARLDSD
0301: RTVQNFAARG DGLSPALDIK GLTAASQRAV QGPLEHNFHL VHPQFQNCSS SHVADTSTAH IENKSKEDGA NNDASGELKK LDSFGRWMDK EIGGDCDDSL
0401: MASDSGNYWN TLDTQNDDKE VSSLSRHMQL DIDSLAPSLS QEQLFTINDF SPDWAYSEDE TKVLIIGTFL GGMEHSTNTK WCCMFGEIEV SAEVLTNNVI
0501: RCHAPLHAPG RVPFYVTCSN RLACSEVREF EYREKPSRVA FSMAVRSTPE DDVQFQIQLA KMLHLGQERK WLDCSIEECD KCKIKSDIYS KKDDIKNDWE
0601: ELEMAKDFIG NHVNPRDVLI KNLLKDRLFE WLVCKVHEGV RGPHVLDGKG QGVIHLAAAL GYEWAMGPII VAGVSPNFRD ARGRTGLHWA SYFGREETVI
0701: ALVKLGTSPD AVEDPTPAFP GGQTAADLAS SRGHKGIAGY LAEAHLSSHL CSLSPSENVM DSVSANIAAE KAAQTAVQNV DGVIEEQLSL KGSLAALRKS
0801: AHAAALIQAA LRARSFRDRR LTRSNDDISE ASLDLVALGS LNKVSKMGHF KDYLHSAAVK IQQKYRGWKG REDFLKIRSR IVKIQAHVRG HQVRKQYKKV
0901: VWSVGIVEKA ILRWRRKGSG LRGFRLEKPI GNAVPEVGKT DEYDYLRVGR RQKFAGVEKA LARVQSMVRH PEARDQYMRL VSKFDNLQIG DEGSSALQQA
1001: EKSEKLIKEE DLGSFIAD
0001: MAEARRFSPV HELDVGQILS EARHRWLRPP EICEILQNYQ RFQISTEPPT TPSSGSVFMF DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKAGSVDVLH
0101: CYYAHGQDNE NFQRRSYWLL QEELSHIVFV HYLEVKGSRV STSFNRMQRT EDAARSPQET GDALTSEHDG YASCSFNQND HSNHSQTTDS ASVNGFHSPE
0201: LEDAESAYNQ HGSSTAYSHQ ELQQPATGGN LTGFDPYYQI SLTPRDSYQK ELRTIPVTDS SIMVDKSKTI NSPGVTNGLK NRKSIDSQTW EEILGNCGSG
0301: VEALPLQPNS EHEVLDQILE SSFTMQDFAS LQESMVKSQN QELNSGLTSD RTVWFQGQDM ELNAISNLAS NEKAPYLSTM KQHLLHGALG EEGLKKMDSF
0401: NRWMSKELGD VGVIADANES FTQSSSRTYW EEVESEDGSN GHNSRRDMDG YVMSPSLSKE QLFSINDFSP SWAYVGCEVV VFVTGKFLKT REETEIGEWS
0501: CMFGQTEVPA DVISNGILQC VAPMHEAGRV PFYVTCSNRL ACSEVREFEY KVAESQVFDR EADDESTIDI LEARFVKLLC SKSENTSPVS GNDSDLSQLS
0601: EKISLLLFEN DDQLDQMLMN EISQENMKNN LLQEFLKESL HSWLLQKIAE GGKGPSVLDE GGQGVLHFAA SLGYNWALEP TIIAGVSVDF RDVNGWTALH
0701: WAAFFGRERI IGSLIALGAA PGTLTDPNPD FPSGSTPSDL AYANGHKGIA GYLSEYALRA HVSLLSLNDK NAETVEMAPS PSSSSLTDSL TAVRNATQAA
0801: ARIHQVFRAQ SFQKKQLKEF GDKKLGMSEE RALSMLAPKT HKSGRAHSDD SVQAAAIRIQ NKFRGYKGRK DYLITRQRII KIQAHVRGYQ FRKNYRKIIW
0901: SVGVLEKVIL RWRRKGAGLR GFKSEALVEK MQDGTEKEED DDFFKQGRKQ TEDRLQKALA RVKSMVQYPE ARDQYRRLLN VVNDIQESKV EKALENSEAT
1001: CFDDDDDLID IEALLEDDDT LMLPMSSSLW TS
0101: CYYAHGQDNE NFQRRSYWLL QEELSHIVFV HYLEVKGSRV STSFNRMQRT EDAARSPQET GDALTSEHDG YASCSFNQND HSNHSQTTDS ASVNGFHSPE
0201: LEDAESAYNQ HGSSTAYSHQ ELQQPATGGN LTGFDPYYQI SLTPRDSYQK ELRTIPVTDS SIMVDKSKTI NSPGVTNGLK NRKSIDSQTW EEILGNCGSG
0301: VEALPLQPNS EHEVLDQILE SSFTMQDFAS LQESMVKSQN QELNSGLTSD RTVWFQGQDM ELNAISNLAS NEKAPYLSTM KQHLLHGALG EEGLKKMDSF
0401: NRWMSKELGD VGVIADANES FTQSSSRTYW EEVESEDGSN GHNSRRDMDG YVMSPSLSKE QLFSINDFSP SWAYVGCEVV VFVTGKFLKT REETEIGEWS
0501: CMFGQTEVPA DVISNGILQC VAPMHEAGRV PFYVTCSNRL ACSEVREFEY KVAESQVFDR EADDESTIDI LEARFVKLLC SKSENTSPVS GNDSDLSQLS
0601: EKISLLLFEN DDQLDQMLMN EISQENMKNN LLQEFLKESL HSWLLQKIAE GGKGPSVLDE GGQGVLHFAA SLGYNWALEP TIIAGVSVDF RDVNGWTALH
0701: WAAFFGRERI IGSLIALGAA PGTLTDPNPD FPSGSTPSDL AYANGHKGIA GYLSEYALRA HVSLLSLNDK NAETVEMAPS PSSSSLTDSL TAVRNATQAA
0801: ARIHQVFRAQ SFQKKQLKEF GDKKLGMSEE RALSMLAPKT HKSGRAHSDD SVQAAAIRIQ NKFRGYKGRK DYLITRQRII KIQAHVRGYQ FRKNYRKIIW
0901: SVGVLEKVIL RWRRKGAGLR GFKSEALVEK MQDGTEKEED DDFFKQGRKQ TEDRLQKALA RVKSMVQYPE ARDQYRRLLN VVNDIQESKV EKALENSEAT
1001: CFDDDDDLID IEALLEDDDT LMLPMSSSLW TS
Arabidopsis Description
CAMTA3Calmodulin-binding transcription activator 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8GSA7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.