CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0020g00630.t01	Wine grape	nucleus	60.36	59.23
PGSC0003DMT400038758	Potato	cytosol	41.64	51.04
Solyc01g057270.2.1	Tomato	nucleus	48.05	50.16
GSMUA_Achr3P08460_001	Banana	nucleus	46.95	47.91
KRH15615	Soybean	cytosol	12.11	38.17
KRH10541	Soybean	nucleus	40.34	37.04
KRH42152	Soybean	nucleus	39.94	36.98
KRH58270	Soybean	nucleus	39.74	36.49
KRH43898	Soybean	nucleus	39.14	36.17
KRH43177	Soybean	nucleus	39.74	36.03
KRH59333	Soybean	nucleus	40.14	35.74
KRH31521	Soybean	nucleus	29.83	32.75
KRH58784	Soybean	nucleus	31.03	31.54
KRG97392	Soybean	nucleus	30.33	31.5
KRH42689	Soybean	cytosol	30.33	31.4
KRH11981	Soybean	nucleus	28.03	30.74
KRH50762	Soybean	nucleus	28.23	30.62
KRH02327	Soybean	nucleus	27.93	30.26
KRH37009	Soybean	nucleus	27.53	30.19

Protein Annotations

Gene3D:1.20.5.190	Gene3D:1.25.40.20	EntrezGene:100818336	MapMan:15.5.26	Gene3D:2.60.40.10	EMBL:ACUP02010305
InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	InterPro:CG-1_dom	EnsemblPlantsGene:GLYMA_17G038800	GO:GO:0001077
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006366
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	GO:GO:0045944
InterPro:IPR000048	InterPro:IPR002110	InterPro:IPR005559	InterPro:IPR013783	InterPro:IPR020683	InterPro:IPR036770
InterPro:IPT_dom	InterPro:IQ_motif_EF-hand-BS	InterPro:Ig-like_fold	InterPro:Ig_E-set	UniProt:K7MJU5	EnsemblPlants:KRH02436
ProteinID:KRH02436	ProteinID:KRH02436.1	InterPro:P-loop_NTPase	PFAM:PF00612	PFAM:PF01833	PFAM:PF03859
PFscan:PS50088	PFscan:PS50096	PFscan:PS50297	PFscan:PS51437	PANTHER:PTHR23335	PANTHER:PTHR23335:SF10
SMART:SM00015	SMART:SM01076	SUPFAM:SSF48403	SUPFAM:SSF52540	SUPFAM:SSF81296	UniParc:UPI000233F39C
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:-:2874376..2882789

Molecular Weight (calculated)

112290.0 Da

IEP (calculated)

7.274

GRAVY (calculated)

-0.490

Length

999 amino acids

Sequence
(BLAST)

001: MAETTKYIPN SQLELEEILN EAEHRWLRPA EICEILRNHK KFKLTPDPPV MPPAGSLFLF DRKALRYFRK DGHRWRKKKD GKTVREAHEK LKAGSVDVLH
101: CYYAHGEDNE YFQRRSYWML DEQLEHIVLV HYREIKEGCK SGISHLPVVP VTLVGSSQNT SVLSSTKINS PISLVQTSFT SSANKVYQNG RASEHEDVNS
201: KNGPQASSHA QPISNYVLHS APWLTHEAAG FSELLRNPLI SSWPSSFPSY SPGTGLSPWT SIQNSSRNTI NMHDGKHHVE ASEADLTVRK LSNAGLDSVH
301: RMQDGVIFRD RLITDMCVQP VIDLPTVNQV KNEHGLDSFH AQVHDHNDHP VVATTKILVE QKLQDGGLYN DESEQVEYGE MKKLDSFGRW MDKEIGGDCD
401: NSLMASDSGN YWSTLDAHSE DKEVSSLRHM QLDVDSLGPS LSQEQLFSIH DFSPDWAYTG VRTKVLIVGT FLGSKKPSSE TKWGCMFGEI EVSAEVLADN
501: VIRCQTPLHS PGRVPFYITC SNRLACSEVR EFEFDENPTK FLGPEGIKIS PEEEVRLQMR LLKLVDLGPD NKWLKCSVSE CEKCKLKGTM YSVRDDSGVF
601: EETFQIDGIG HINHRDILFQ RLVRDKLYEW LIYKVHEGGK GPHVLDDEGQ GVIHLAAALG YVWAMAPLVA AGISPNFRDS RGRTGLHWAS YFGREETVIV
701: LVQLGATPGA VEDPTSAFPR GQTAADLGSS RGHKGIAGYL AEADLTNQLS VLTVKENETG NIATTIAANS ALQSVEDDSS SMTMDEQHYL KESLAVFQKS
801: AHAAASILAA FRARSFCQRQ LAQSSSDISE VLDVVADSLS KVQNKGHFED YLHFAALKIQ KRYRGWKGRK DFLKIRDRIV KIQAHIRGHQ VRKQYKKVVW
901: SVSIVEKAIL RWRRKGAGLR GFRVGQPVGV VVKDAEKSDE YEFLSIGRRQ KSDDVKKALD RVKSMVRNPE ARDQYMRLIM KYEKFKIDDG GSSQSQHVG

Best Arabidopsis Sequence Match ( AT5G09410.1 )
(BLAST)

001: MVDRRSFGSI TPPLQLDMEQ LLSEAQHRWL RPTEICEILQ NYHKFHIASE SPTRPASGSL FLFDRKVLRY FRKDGHNWRK KKDGKTIREA HEKLKVGSID
101: VLHCYYAHGE ANENFQRRCY WMLEQHLMHI VFVHYLEVKG NRTSIGMKEN NSNSVNGTAS VNIDSTASPT STLSSLCEDA DTGNRYGWTP APGMRNVSQV
201: HGNRVRESDS QRLVDVRALD TVGNSLTRFH DQPYCNNLLT QMQPSNTDSM LVEENSEKGG RLKAEHIRNP LQTQFNWQDD TDLALFEQSA QDNFETFSSL
301: LGSENLQPFG ISYQAPPSNM DSEYMPVMKI LRRSEDSLKK VDSFSKWAIK ELGEMEDLQM QSSRGDIAWT TVECETAAAG ISLSPSLSED QRFTIVDFWP
401: KSAKTDAEVE VMVIGTFLLS PQEVTKYNWS CMFGEVEVPA EILVDGVLCC HAPPHTAGHV PFYVTCSNRF ACSEVREFDF LSGSTQKINA TDVYGTYTNE
501: ASLQLRFEKM LAHRDFVHEH HIFEDVGDKR RQISKIMLLK EEKEYLLPGT YQRDSTKQEP KGQLFRELFE EELYIWLIHK VTEEGKGPNI LDEDGQGILH
601: FVAALGYDWA IKPVLAAGVN INFRDANGWS ALHWAAFSGR EETVAVLVSL GADAGALTDP SPELPLGKTA ADLAYANGHR GISGFLAESS LTSYLEKLTV
701: DSKENSPANS CGEKAVQTVS ERTAAPMTYG DVPEKLSLKD SLTAVRNATQ AADRLHQVFR MQSFQRKQLC DIGDDEKIDI SDQLAVSFAA SKTKNPGQGD
801: VSLSCAATHI QKKYRGWKKR KEFLLIRQRI VKIQAHVRGH QVRKQYRTVI WSVGLLEKII LRWRRKGNGL RGFKRNAVAK TVEPEPPVSA ICPRIPQEDE
901: YDYLKEGRKQ TEERLQKALT RVKSMVQYPE ARDQYRRLLT VVEGFRENEA SSSASINNKE EEAVNCEEDD FIDIESLLND DTLMMSISP

Arabidopsis Description

EICBP.BEthylene induced calmodulin binding protein [Source:UniProtKB/TrEMBL;Acc:F4KCL4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.