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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • cytosol 2
  • endoplasmic reticulum 1
  • nucleus 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc01g057270.2.1 Tomato nucleus 91.29 77.74
VIT_05s0020g00630.t01 Wine grape nucleus 56.81 45.48
KRH02436 Soybean nucleus 51.04 41.64
GSMUA_Achr3P08460_001 Banana nucleus 42.33 35.24
PGSC0003DMT400084738 Potato cytosol 29.08 34.65
PGSC0003DMT400011979 Potato cytosol 23.8 27.64
Protein Annotations
Gene3D:1.20.5.190Gene3D:1.25.40.20MapMan:15.5.26Gene3D:2.60.40.10InterPro:Ankyrin_rptInterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sfGO:GO:0003674GO:GO:0005488GO:GO:0005515InterPro:IPR000048InterPro:IPR002110
InterPro:IPR013783InterPro:IPR020683InterPro:IPR036770InterPro:IQ_motif_EF-hand-BSInterPro:Ig-like_foldInterPro:Ig_E-set
UniProt:M1B7C0InterPro:P-loop_NTPasePFAM:PF00612PFAM:PF12796EnsemblPlantsGene:PGSC0003DMG400014978PGSC:PGSC0003DMG400014978
EnsemblPlants:PGSC0003DMT400038758PFscan:PS50088PFscan:PS50096PFscan:PS50297PANTHER:PTHR23335PANTHER:PTHR23335:SF10
SMART:SM00015SMART:SM00248SUPFAM:SSF48403SUPFAM:SSF52540SUPFAM:SSF81296UniParc:UPI0002962255
SEG:seg:::::
Description
Calmodulin-binding transcription activator (Camta), plants [Source:PGSC_GENE;Acc:PGSC0003DMG400014978]
Coordinates
chr1:+:33294356..33299919
Molecular Weight (calculated)
90745.4 Da
IEP (calculated)
9.318
GRAVY (calculated)
-0.400
Length
815 amino acids
Sequence
(BLAST)
001: MQGYRIGASR LQPVHPGLLL ENPESSSKPC FVFGPTFQKS HTSNPSLVDW KEQALSSELH SGDSKGLMEF SRSQERFQLN PQVRAFMSSG FRRSDRNLNV
101: MLQRKFYSGH FNLADLRSSK LTYARLYAGK ALANNRNRLT ITSGEVFEEN IHVAPAQIQN ISSSQTVITP DAAVKTSSLD GGLNSDEVGS LKKLDILGRW
201: MDREIGGDCN KSLMASDSGN YWNTLDTDNG DKEVSTLSRH MLLEADSVGT SPSQKQLFRI FDFSPQWAFS GVETKVLIVG TFLVHGKHLT CQKWSCMFGE
301: VEVSAEVQTQ SIRCQVPFHA PGRVPFYVTC SNRLACSEVR EFEYREKSSE LALALRPSDE VRLQVQLAKL LYSGLNKKFL DCSSGECEKC KLKTQLCSLK
401: CKTGNATERL EDLLAIIECD HINFKDVQIQ NFMKDKLYEW LVSRAHEEDK GPNILNDKGK GVIHLVAALG YEWGLLPLIA AGISPNFRDA CGRTALHWAA
501: RHGREDMVIA LIKLGVAAGA VDDPTTAFPG GRTAADLASS RGHKGIAGYL AESDLTAHHQ LLATSNNALD TIGAGLEAEK VFESAVQEIV PLNGTIDDDV
601: SLKGSLASLR KSAHAAALIQ AAFRARSFRQ RQLTESRNDV SEDSLDLVAL GSLNKVQKVN CVEYYLHSAA TNIQQKYCGW KGRREFLKVH NRIVKIQAHV
701: RGHQVRKQYK KFVWSVGILE KGILRWRRKK TGLRGFRPEK TSQKGILEPE KKDEYDYLSI GLKQKSAGVE KALARVQSMV RHPEARDQYM RLVAKFKSCK
801: LDDGGREVNR SSSPV
Best Arabidopsis Sequence Match ( AT5G64220.2 )
(BLAST)
0001: MADRGSFGFA PRLDIKQLLS EAQHRWLRPA EICEILRNHQ KFHIASEPPN RPPSGSLFLF DRKVLRYFRK DGHNWRKKKD GKTVKEAHEK LKVGSIDVLH
0101: CYYAHGEDNE NFQRRCYWML EQDLMHIVFV HYLEVKGNRM STSGTKENHS NSLSGTGSVN VDSTATRSSI LSPLCEDADS GDSRQASSSL QQNPEPQTVV
0201: PQIMHHQNAS TINSYNTTSV LGNRDGWTSA HGNRVKGSNS QRSGDVPAWD ASFENSLARY QNLPYNAPLT QTQPSTFGLI PMEGKTEKGS LLTSEHLRNP
0301: LQSQVNWQTP VQESVPLQKW PMDSHSGMTD ATDLALFGQG AHENFGTFSS LLGSQDQQSS SFQAPFTNNE AAYIPKLGPE DLIYEASANQ TLPLRKALLK
0401: KEDSLKKVDS FSRWVSKELG EMEDLQMQSS SGGIAWTSVE CENAAAGSSL SPSLSEDQRF TMIDFWPKWT QTDSEVEVMV IGTFLLSPQE VTSYSWSCMF
0501: GEVEVPADIL VDGVLCCHAP PHEVGRVPFY ITCSDRFSCS EVREFDFLPG STRKLNATDI YGANTIETSL HLRFENLLAL RCSVQEHHIF ENVGEKRRKI
0601: SKIMLLKDEK EPPLPGTIEK DLTELEAKER LIREEFEDKL YLWLIHKVTE EGKGPNILDE DGQGVLHLAA ALGYDWAIKP ILAAGVSINF RDANGWSALH
0701: WAAFSGREDT VAVLVSLGAD AGALADPSPE HPLGKTAADL AYGNGHRGIS GFLAESSLTS YLEKLTVDAK ENSSADSSGA KAVLTVAERT ATPMSYGDVP
0801: ETLSMKDSLT AVLNATQAAD RLHQVFRMQS FQRKQLSELG GDNKFDISDE LAVSFAAAKT KKSGHSSGAV HAAAVQIQKK YRGWKKRKEF LLIRQRIVKI
0901: QAHVRGHQVR KQYRAIIWSV GLLEKIILRW RRKGSGLRGF KRDTISKPTE PVCPAPQEDD YDFLKEGRKQ TEERLQKALT RVKSMAQYPE ARAQYRRLLT
1001: VVEGFRENEA SSSSALKNNT EEAANYNEED DLIDIDSLLD DDTFMSLAFE
Arabidopsis Description
CAMTA2Calmodulin-binding transcription activator 2 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPP4]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.