CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH37009	Soybean	nucleus	91.99	91.99
KRH50762	Soybean	nucleus	73.55	72.75
KRH02327	Soybean	nucleus	72.45	71.58
VIT_05s0077g01240.t01	Wine grape	cytosol	63.34	62.24
GSMUA_Achr5P21200_001	Banana	cytosol	9.88	61.22
TraesCS2B01G254100.1	Wheat	cytosol	9.11	60.14
Solyc12g099340.1.1	Tomato	nucleus	59.5	59.23
AT3G16940.1	Thale cress	nucleus	54.12	58.34
CDY45590	Canola	cytosol	19.65	58.31
CDY69566	Canola	nucleus	17.34	57.88
Bra022188.1-P	Field mustard	cytosol	53.68	57.53
CDX92108	Canola	cytosol	53.79	57.44
CDX95894	Canola	cytosol	53.68	57.33
Solyc01g060140.2.1	Tomato	nucleus	41.93	57.27
PGSC0003DMT400011979	Potato	cytosol	44.13	57.27
CDY22778	Canola	nucleus	57.52	57.02
Bra038040.1-P	Field mustard	nucleus	57.41	56.91
CDY58036	Canola	nucleus	57.41	56.91
GSMUA_Achr5P21190_001	Banana	cytosol	30.74	52.63
GSMUA_Achr8P10490_001	Banana	cytosol	44.35	48.21
KXG36244	Sorghum	nucleus	46.1	45.95
Os07t0490200-01	Rice	nucleus	45.66	44.88
TraesCS2D01G237300.2	Wheat	cytosol	44.57	44.76
TraesCS2A01G229400.1	Wheat	nucleus	44.57	44.76
HORVU2Hr1G051690.3	Barley	cytosol	44.68	44.34
TraesCS2B01G254000.2	Wheat	cytosol	34.47	42.09
Zm00001d021516_P003	Maize	cytosol, nucleus, plasma membrane	44.13	41.53
KRH15615	Soybean	cytosol	12.4	35.65
KRH58784	Soybean	nucleus	32.05	29.7
KRH42689	Soybean	cytosol	31.28	29.53
KRH31521	Soybean	nucleus	29.2	29.23
KRG97392	Soybean	nucleus	30.52	28.9
KRH02436	Soybean	nucleus	30.74	28.03
KRH42152	Soybean	nucleus	32.49	27.43
KRH58270	Soybean	nucleus	32.6	27.3
KRH10541	Soybean	nucleus	31.94	26.75
KRH43898	Soybean	nucleus	31.39	26.46
KRH43177	Soybean	nucleus	31.61	26.13
KRH59333	Soybean	nucleus	32.05	26.02

Protein Annotations

Gene3D:1.20.5.190	Gene3D:1.25.40.20	EntrezGene:100819198	MapMan:15.5.26	Gene3D:2.60.40.10	EMBL:ACUP02009258
InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	InterPro:CG-1_dom	ncoils:Coil	EnsemblPlantsGene:GLYMA_15G143400
GO:GO:0001077	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006366	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
GO:GO:0045944	UniProt:I1MGH0	InterPro:IPR000048	InterPro:IPR002110	InterPro:IPR005559	InterPro:IPR013783
InterPro:IPR020683	InterPro:IPR036770	InterPro:IPT_dom	InterPro:IQ_motif_EF-hand-BS	InterPro:Ig-like_fold	InterPro:Ig_E-set
EnsemblPlants:KRH11981	ProteinID:KRH11981	ProteinID:KRH11981.1	InterPro:P-loop_NTPase	PFAM:PF00612	PFAM:PF01833
PFAM:PF03859	PFAM:PF12796	PFscan:PS50088	PFscan:PS50096	PFscan:PS50297	PFscan:PS51437
PANTHER:PTHR23335	PANTHER:PTHR23335:SF3	SMART:SM00015	SMART:SM00248	SMART:SM01076	SUPFAM:SSF48403
SUPFAM:SSF52540	SUPFAM:SSF81296	UniParc:UPI000233B046	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr15:-:11764978..11774953

Molecular Weight (calculated)

103090.0 Da

IEP (calculated)

7.819

GRAVY (calculated)

-0.428

Length

911 amino acids

Sequence
(BLAST)

001: MMSHNLTGQL VSAEIHGFHT LEDLDVSNTM EEAKSRWLRP NEIHAILCNH KYFKINVKPV NLPKSGTIVL FDRKMLRNFR KDGHNWKKKT DGKTVKEAHE
101: HLKVGNEERI HVYYAHGQDN PTFVRRCYWL LDKNLEHIVL VHYRDTQELQ LQGSPATPVN SNSSSASDPA ASWIPSEDLD SGVNSAYAVE LNDNLTAKSH
201: EQRLHEINTL EWDDLVVPNV NTSTTSNGGN VPYSFQENQS LLSGRFGNVS SNPSAEIPSF GNLTQPVSGS NSAPYSFPDS AILLKNSPIS SGGVDTLGTL
301: VNEGLQSQDS FGTWMNIISD TPCSIDESAL KASISSVHVP YSSLVADNLQ SSLPEQVFNL TEVSPTWASS TEKTKVLVTG YFHNNYENLA KSNLLCVCGD
401: VSVPVEIVQV GVYRCCVPPH SPGLVNLYLS FDGHKPISQV VNFEYRTPIL HEPTASMEEK YNWNEFRLQM RLAHLLFASD TSLNIFSSKV SPNALKEARR
501: FSFKTSYISK SWQYLMKSID DNTIPFSKVK DSLFETALKN KLKEWLLERI ILGRKSTEYD AQGQGVIHLC AMLGYSWAIS LFSWSGLSLD FRDKFGWTAL
601: HWAASYGMEK MVATLLSCGA RPNLVTDPTP QYPGGCTAAD LAYMKGCDGL AAFLSEKSLV EQFNEMSLAG NISGSLETSS TDPVNAENLT EDQLYVKETL
701: AAYRISAEAA ARIQAAFREH SFKLRYKAVE IISPEEEARQ IVAAMRIQHA FRNYESKKKM TAAARIQHRF RTWKYRREFL NMRHQAIKIQ AAFRGFQARK
801: QYRKIIWSVG VLEKVILRWR LKRKGFRGLQ VNPAREETQE SDSIAEEDFF RTGRKQAEER IERSVIRVQA MFRSKKAQEE YRRMKLTHNQ AKLELELEEF
901: LDSEVDMLPK T

Best Arabidopsis Sequence Match ( AT3G16940.1 )
(BLAST)

001: MDGDGLGRLI GSEIHGFHTL QDLDVQTMLE EAKSRWLRPN EIHAILYNPK YFTINVKPVN LPNSGRIILF DRKMLRNFRK DGHNWKKKKD GRTVKEAHEH
101: LKVGNEERIH VYYAHGEDNT TFVRRCYWLL DKARENIVLV HYRDTQEAAT TSGDSISSPI SVSEQTFPNR VAAEDIDTVV RNHDISLHDI NTLDWDELLV
201: PTDLNNQSAP TVDNLSYFTE PLQNAANGTA EHGNATVADG SLDALLNDGP QSRESFGRWM NSFISESNGS LEDPSFEPMV MPRQDPLAPQ AVFHSHSNIP
301: EQVFNITDVS PAWAYSSEKT KILVTGFLHD SYQHLERSNL YCVCGDFCVP AEYLQAGVYR CIIPPHSPGM VNLYLSADGH KPISQCFRFE HRAVPVLDKT
401: VPEDNQDSKW EEFEFQVRLS HLLFTSSNKL NVLSSKISPH NLRDAKKLAS KTNHLLNSWA YLVKSIQGNK VSFDQAKDHL FELSLKNRLK EWLMEKVLEG
501: RNTLDYDSKG LGVIHLCASL GYTWSVQLFS LSGLSLNFRD KQGWTALHWA AYYGREKMVA ALLSAGARPN LVTDSTKDNL GGCMAADLAQ QNGYDGLAAY
601: LAEKCLVAQF RDMKIAGNIT GDLEACKAEM LNQGTLPEDE QSLKDALAAY RTAAEAAARI QGAFREKALK AARSSVIQFA NKEEEAKSII AAMKIQNAFR
701: KYDTRRKIEA AYRIQCRFQT WKIRREYLNM RRQAIRIQAA FRGLQARRQY KKILWSVGVL EKAVLRWRQK RKGFRGLQVA AEEDSPGEAQ EDFYKTSQRQ
801: AEERLERSVV RVQAMFRSKK AQQDYRRMKL THEEAQLEYG CLEDI

Arabidopsis Description

calmodulin binding;transcription regulators [Source:TAIR;Acc:AT3G16940]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.