Factsheet for TraesCS2A01G229400.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G237300.2	Wheat	cytosol	99.01	99.01
TraesCS2B01G254000.2	Wheat	cytosol	80.15	97.45
TraesCS2B01G254100.1	Wheat	cytosol	14.77	97.1
HORVU2Hr1G051690.3	Barley	cytosol	93.61	92.48
Os07t0490200-01	Rice	nucleus	75.52	73.89
KXG36244	Sorghum	nucleus	72.77	72.21
Zm00001d021516_P003	Maize	cytosol, nucleus, plasma membrane	69.13	64.77
GSMUA_Achr5P21200_001	Banana	cytosol	10.36	63.95
Solyc01g060170.2.1	Tomato	nucleus	10.36	59.12
GSMUA_Achr5P21190_001	Banana	cytosol	32.97	56.2
GSMUA_Achr8P10490_001	Banana	cytosol	48.95	52.98
CDY45590	Canola	cytosol	16.1	47.56
AT3G16940.1	Thale cress	nucleus	42.34	45.44
Solyc01g060140.2.1	Tomato	nucleus	33.41	45.43
VIT_05s0077g01240.t01	Wine grape	cytosol	46.31	45.31
Bra022188.1-P	Field mustard	cytosol	42.45	45.29
CDX92108	Canola	cytosol	42.56	45.25
CDX95894	Canola	cytosol	42.23	44.9
KRH02327	Soybean	nucleus	45.53	44.79
KRH37009	Soybean	nucleus	44.98	44.79
KRH50762	Soybean	nucleus	45.42	44.73
KRH11981	Soybean	nucleus	44.76	44.57
Solyc12g099340.1.1	Tomato	nucleus	44.87	44.48
PGSC0003DMT400011979	Potato	cytosol	34.07	44.02
CDY22778	Canola	nucleus	43.99	43.42
CDY58036	Canola	nucleus	43.88	43.31
Bra038040.1-P	Field mustard	nucleus	43.88	43.31
CDY69566	Canola	nucleus	12.68	42.12
TraesCS3A01G433300.2	Wheat	nucleus	25.14	27.77
TraesCS2A01G283800.1	Wheat	nucleus	29.11	25.71
TraesCS2A01G163000.1	Wheat	cytosol	29.0	25.63
TraesCS4A01G407100.1	Wheat	cytosol	28.89	24.58

Protein Annotations

Gene3D:1.20.5.190	Gene3D:1.25.40.20	MapMan:15.5.26	Gene3D:2.60.40.10	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	InterPro:CG-1_dom	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005515	GO:GO:0005516	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
GO:GO:0045893	InterPro:IPR000048	InterPro:IPR002110	InterPro:IPR005559	InterPro:IPR013783	InterPro:IPR020683
InterPro:IPR036770	InterPro:IQ_motif_EF-hand-BS	InterPro:Ig-like_fold	InterPro:Ig_E-set	InterPro:P-loop_NTPase	PFAM:PF00612
PFAM:PF03859	PFAM:PF12796	PFscan:PS50088	PFscan:PS50096	PFscan:PS50297	PFscan:PS51437
PANTHER:PTHR23335	PANTHER:PTHR23335:SF3	SMART:SM00015	SMART:SM00248	SMART:SM01076	SUPFAM:SSF48403
SUPFAM:SSF52540	SUPFAM:SSF81296	EnsemblPlantsGene:TraesCS2A01G229400	EnsemblPlants:TraesCS2A01G229400.1	TIGR:cd00204	SEG:seg

Description

No Description!

Coordinates

chr2A:-:258345785..258361000

Molecular Weight (calculated)

101839.0 Da

IEP (calculated)

8.985

GRAVY (calculated)

-0.462

Length

907 amino acids

Sequence
(BLAST)

001: MAGAAGRERD PLLRSEIHGF ITYADLNFEK LKAEAASRWF RPNEIYAVLA NHERFKVHAQ PIDKPVSGTI VLYDRKVVRN FRKDGHNWKK KKDGKTVQEA
101: HEKLKIGNEE RVHVYYARGE DNPNFFRRCY WLLDKEAERI VLVHYRQTSE ENAIAHPSTE AEAEAPTMNV IQYYTSPISA NSASVHTEIS FSPPAPEEIN
201: SHGGSAISSD TGGSSLEEFW VHLLESSMTK DTACGASVAF SQQIKCGTKD SGNDTDSTNN VHVNHAGALE HQVDQSQYPL TSDLDSQSHQ FATSLRKTPV
301: DGDIPNDVPA RENSLGLWKY LDDDSPCLGD NIVSNGKIFN ITDFSPEWAC STEHTKILVI GDYYEQYKHL AGSNIYGIFG DNCVAANMVQ TGVYRFMVGP
401: HTAGRVDFYL TLDGKTPISE VLNFEYRSVP GSSLHSELKP LEDEYTKSKL QMQMRLARLL FVTNKKKIAP KLLVEGSKVS NLILASPEKE WMDLWKIAGD
501: SEGTSVHATE DLLELVLRNR LQEWLLERVI GGHKSTGRDD LGQGPIHLCS FLGYTWAIRL FSVSGFSLDF RDSSGWTALH WAAYHGREKM VAALLSAGAN
601: PSLVTDPTAV SPGGCTPADL AARQGYVGLA AYLAEKGLTA HFESMSLSKG TKQSPSRTKL TKVHSEKFEN LTEQELCLKE SLAAYRNAAD AASNIQAALR
701: DRTLKLQTKA ILLANPEMQA TAIVAAMRIQ HAFRNYNRKK EMRAAARIQN HFRTWKVRRN FKNMRRQAIR IQAAYRGHQV RRQYRKVIWS VGVVEKAILR
801: WRKKRKGLRG IANGMPAEMT VDVEAASTAE EGFFQASRQQ AEDRFNRSVV RVQALFRCHR AQHEYRRMRI AHEEAKLEFS KGQQQAPACR RTILLILLAE
901: SGVCICC

Best Arabidopsis Sequence Match ( AT3G16940.1 )
(BLAST)

001: MDGDGLGRLI GSEIHGFHTL QDLDVQTMLE EAKSRWLRPN EIHAILYNPK YFTINVKPVN LPNSGRIILF DRKMLRNFRK DGHNWKKKKD GRTVKEAHEH
101: LKVGNEERIH VYYAHGEDNT TFVRRCYWLL DKARENIVLV HYRDTQEAAT TSGDSISSPI SVSEQTFPNR VAAEDIDTVV RNHDISLHDI NTLDWDELLV
201: PTDLNNQSAP TVDNLSYFTE PLQNAANGTA EHGNATVADG SLDALLNDGP QSRESFGRWM NSFISESNGS LEDPSFEPMV MPRQDPLAPQ AVFHSHSNIP
301: EQVFNITDVS PAWAYSSEKT KILVTGFLHD SYQHLERSNL YCVCGDFCVP AEYLQAGVYR CIIPPHSPGM VNLYLSADGH KPISQCFRFE HRAVPVLDKT
401: VPEDNQDSKW EEFEFQVRLS HLLFTSSNKL NVLSSKISPH NLRDAKKLAS KTNHLLNSWA YLVKSIQGNK VSFDQAKDHL FELSLKNRLK EWLMEKVLEG
501: RNTLDYDSKG LGVIHLCASL GYTWSVQLFS LSGLSLNFRD KQGWTALHWA AYYGREKMVA ALLSAGARPN LVTDSTKDNL GGCMAADLAQ QNGYDGLAAY
601: LAEKCLVAQF RDMKIAGNIT GDLEACKAEM LNQGTLPEDE QSLKDALAAY RTAAEAAARI QGAFREKALK AARSSVIQFA NKEEEAKSII AAMKIQNAFR
701: KYDTRRKIEA AYRIQCRFQT WKIRREYLNM RRQAIRIQAA FRGLQARRQY KKILWSVGVL EKAVLRWRQK RKGFRGLQVA AEEDSPGEAQ EDFYKTSQRQ
801: AEERLERSVV RVQAMFRSKK AQQDYRRMKL THEEAQLEYG CLEDI

Arabidopsis Description

calmodulin binding;transcription regulators [Source:TAIR;Acc:AT3G16940]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.