Factsheet for Os07t0490200-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

nucleus: 16192280

gfp PMID: 16192280 doi

MS Choi, MC Kim, JH Yoo, BC Moon, SC Koo, BO Park, JH Lee, YD Koo, HJ Han, SY Lee, WS Chung, CO Lim, MJ Cho

Division of Applied Life Science (BK21 Program), Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju 660-701, Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G254100.1	Wheat	cytosol	12.41	83.33
TraesCS2D01G237300.2	Wheat	cytosol	74.0	75.63
TraesCS2A01G229400.1	Wheat	nucleus	73.89	75.52
TraesCS2B01G254000.2	Wheat	cytosol	60.09	74.66
KXG36244	Sorghum	nucleus	73.57	74.62
HORVU2Hr1G051690.3	Barley	cytosol	73.46	74.18
Zm00001d021516_P003	Maize	cytosol, nucleus, plasma membrane	69.9	66.94
GSMUA_Achr5P21200_001	Banana	cytosol	10.36	65.31
Solyc01g060170.2.1	Tomato	nucleus	10.57	61.64
GSMUA_Achr5P21190_001	Banana	cytosol	32.9	57.33
GSMUA_Achr8P10490_001	Banana	cytosol	49.19	54.42
CDY45590	Canola	cytosol	16.29	49.19
KRH11981	Soybean	nucleus	44.88	45.66
KRH37009	Soybean	nucleus	44.66	45.44
AT3G16940.1	Thale cress	nucleus	41.42	45.44
VIT_05s0077g01240.t01	Wine grape	cytosol	45.09	45.09
KRH50762	Soybean	nucleus	44.66	44.95
Bra022188.1-P	Field mustard	cytosol	40.99	44.71
KRH02327	Soybean	nucleus	44.44	44.69
CDX92108	Canola	cytosol	41.1	44.67
Solyc12g099340.1.1	Tomato	nucleus	44.01	44.59
CDX95894	Canola	cytosol	40.67	44.2
CDY69566	Canola	nucleus	12.95	43.96
Solyc01g060140.2.1	Tomato	nucleus	31.61	43.93
PGSC0003DMT400011979	Potato	cytosol	33.23	43.87
CDY22778	Canola	nucleus	42.39	42.76
CDY58036	Canola	nucleus	42.39	42.76
Bra038040.1-P	Field mustard	nucleus	42.29	42.66
Os03t0388500-01	Rice	cytosol, peroxisome	10.46	32.66
Os01t0923600-02	Rice	nucleus	26.0	27.45
Os04t0388500-01	Rice	nucleus	28.37	26.22
Os07t0623100-01	Rice	cytosol	7.87	25.98
Os10t0375600-01	Rice	nucleus	28.48	25.81
Os03t0191000-01	Rice	nucleus	28.59	25.75

Protein Annotations

Gene3D:1.20.5.190	Gene3D:1.25.40.20	MapMan:15.5.26	Gene3D:2.60.40.10	EntrezGene:4343265	EMBL:AF499741
InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	ProteinID:BAC80067.1	ProteinID:BAF21586.1	ProteinID:BAT01546.1
InterPro:CG-1_dom	GO:GO:0001077	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005515	GO:GO:0005516	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0006366	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009409	GO:GO:0009628	GO:GO:0009987
GO:GO:0043565	GO:GO:0045893	GO:GO:0045944	GO:GO:0070417	InterPro:IPR000048	InterPro:IPR002110
InterPro:IPR005559	InterPro:IPR013783	InterPro:IPR020683	InterPro:IPR036770	InterPro:IQ_motif_EF-hand-BS	InterPro:Ig-like_fold
InterPro:Ig_E-set	EnsemblPlantsGene:Os07g0490200	EnsemblPlants:Os07t0490200-01	InterPro:P-loop_NTPase	PFAM:PF00612	PFAM:PF03859
PFAM:PF12796	PFscan:PS50088	PFscan:PS50096	PFscan:PS50297	PFscan:PS51437	PANTHER:PTHR23335
PANTHER:PTHR23335:SF3	UniProt:Q7XHR2	SMART:SM00015	SMART:SM00248	SMART:SM01076	SUPFAM:SSF48403
SUPFAM:SSF52540	SUPFAM:SSF81296	UniParc:UPI00001B3B22	RefSeq:XP_015646432.1	SEG:seg	:

Description

CaM-binding transcription factorSimilar to Ankyrin repeat-rich membrane-spanning protein. (Os07t0490200-01);Similar to CaM-binding transcription factor. (Os07t0490200-02)

Coordinates

chr7:-:18205280..18218108

Molecular Weight (calculated)

103620.0 Da

IEP (calculated)

7.751

GRAVY (calculated)

-0.449

Length

927 amino acids

Sequence
(BLAST)

001: MAGAGGWDPL VGSEIHGFLT YPDLNYEKLV AEAAARWFRP NEIYAILANH ARFKIHAQPV DKPVSGTVVL YDRKVVRNFR KDGHNWKKKK DGRTVQEAHE
101: KLKIGNEERV HVYYARGEDD PNFFRRCYWL LDKDLERIVL VHYRQTAEEN AMAPPNPEPE VADVPTVNLI HYTSPLTSAD STSGHTELSL PEEINSHGGI
201: SASSETGNHD SSLEEFWANL LESSIKNDPK VVTSACGGSF VSSQQINNGP KNSGNIVNTS MASNAIPALN VVSETYATNH GLNQVNANHF GALKHQGDQT
301: QSLLASDVDS QSDQFISSSV KSPMDGNTSI PNEVPARQNS LGLWKYLDDD SPGLGDNPSS VPQSFCPVTN ERLLEINEIS PEWAYSTETT KVVVIGNFYE
401: QYKHLAGSAM FGVFGEQCVA GDIVQTGVYR FMVGPHTPGK VDFYLTLDGK TPISEICSFT YHVMHGSSLE ARLPPSEDDY KRTNLKMQMR LARLLFATNK
501: KKIAPKLLVE GTKVANLMSA LPEKEWMDLW NILSDPEGTY VPVTESLLEL VLRNRLQEWL VEMVMEGHKS TGRDDLGQGA IHLCSFLGYT WAIRLFSLSG
601: FSLDFRDSSG WTALHWAAYH GRERMVATLL SAGANPSLVT DPTPESPAGL TAADLAARQG YDGLAAYLAE KGLTAHFEAM SLSKDTEQSP SKTRLTKLQS
701: EKFEHLSEQE LCLKESLAAY RNAADAASNI QAALRERTLK LQTKAIQLAN PEIEASEIVA AMKIQHAFRN YNRKKAMRAA ARIQSHFRTW KMRRNFINMR
801: RQVIRIQAAY RGHQVRRQYR KVIWSVGIVE KAILRWRKKR KGLRGIASGM PVVMTVDAEA EPASTAEEDF FQAGRQQAED RFNRSVVRVQ ALFRSYKAQQ
901: EYRRMKIAHE EAKIEFSEGQ LGAACRS

Best Arabidopsis Sequence Match ( AT3G16940.1 )
(BLAST)

001: MDGDGLGRLI GSEIHGFHTL QDLDVQTMLE EAKSRWLRPN EIHAILYNPK YFTINVKPVN LPNSGRIILF DRKMLRNFRK DGHNWKKKKD GRTVKEAHEH
101: LKVGNEERIH VYYAHGEDNT TFVRRCYWLL DKARENIVLV HYRDTQEAAT TSGDSISSPI SVSEQTFPNR VAAEDIDTVV RNHDISLHDI NTLDWDELLV
201: PTDLNNQSAP TVDNLSYFTE PLQNAANGTA EHGNATVADG SLDALLNDGP QSRESFGRWM NSFISESNGS LEDPSFEPMV MPRQDPLAPQ AVFHSHSNIP
301: EQVFNITDVS PAWAYSSEKT KILVTGFLHD SYQHLERSNL YCVCGDFCVP AEYLQAGVYR CIIPPHSPGM VNLYLSADGH KPISQCFRFE HRAVPVLDKT
401: VPEDNQDSKW EEFEFQVRLS HLLFTSSNKL NVLSSKISPH NLRDAKKLAS KTNHLLNSWA YLVKSIQGNK VSFDQAKDHL FELSLKNRLK EWLMEKVLEG
501: RNTLDYDSKG LGVIHLCASL GYTWSVQLFS LSGLSLNFRD KQGWTALHWA AYYGREKMVA ALLSAGARPN LVTDSTKDNL GGCMAADLAQ QNGYDGLAAY
601: LAEKCLVAQF RDMKIAGNIT GDLEACKAEM LNQGTLPEDE QSLKDALAAY RTAAEAAARI QGAFREKALK AARSSVIQFA NKEEEAKSII AAMKIQNAFR
701: KYDTRRKIEA AYRIQCRFQT WKIRREYLNM RRQAIRIQAA FRGLQARRQY KKILWSVGVL EKAVLRWRQK RKGFRGLQVA AEEDSPGEAQ EDFYKTSQRQ
801: AEERLERSVV RVQAMFRSKK AQQDYRRMKL THEEAQLEYG CLEDI

Arabidopsis Description

calmodulin binding;transcription regulators [Source:TAIR;Acc:AT3G16940]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.