Factsheet for Bra038040.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22778	Canola	nucleus	99.67	99.67
CDY58036	Canola	nucleus	99.46	99.46
Bra022188.1-P	Field mustard	cytosol	64.42	69.65
GSMUA_Achr5P21200_001	Banana	cytosol	10.01	62.59
TraesCS2B01G254100.1	Wheat	cytosol	8.92	59.42
KRH11981	Soybean	nucleus	56.91	57.41
KRH37009	Soybean	nucleus	56.69	57.19
KRH50762	Soybean	nucleus	57.02	56.89
KRH02327	Soybean	nucleus	56.69	56.51
VIT_05s0077g01240.t01	Wine grape	cytosol	56.26	55.77
PGSC0003DMT400011979	Potato	cytosol	42.55	55.7
Solyc12g099340.1.1	Tomato	nucleus	55.28	55.52
Solyc01g060140.2.1	Tomato	nucleus	39.17	53.97
GSMUA_Achr5P21190_001	Banana	cytosol	30.58	52.82
GSMUA_Achr8P10490_001	Banana	cytosol	43.42	47.61
KXG36244	Sorghum	nucleus	43.74	43.98
TraesCS2A01G229400.1	Wheat	nucleus	43.31	43.88
TraesCS2D01G237300.2	Wheat	cytosol	43.31	43.88
HORVU2Hr1G051690.3	Barley	cytosol	43.2	43.25
Os07t0490200-01	Rice	nucleus	42.66	42.29
TraesCS2B01G254000.2	Wheat	cytosol	33.3	41.02
Zm00001d021516_P003	Maize	cytosol, nucleus, plasma membrane	41.57	39.46
Bra038534.1-P	Field mustard	nucleus	28.29	27.96
Bra009382.1-P	Field mustard	nucleus	29.05	26.51
Bra030248.1-P	Field mustard	nucleus	29.27	26.09
Bra037769.1-P	Field mustard	cytosol	28.73	25.68
Bra004217.1-P	Field mustard	nucleus	27.31	25.18
Bra004096.1-P	Field mustard	nucleus	26.12	24.67
Bra034007.1-P	Field mustard	nucleus	26.99	24.51
Bra004218.1-P	Field mustard	nucleus	0.0	0.0

Protein Annotations

Gene3D:1.20.5.190	Gene3D:1.25.40.20	MapMan:15.5.26	Gene3D:2.60.40.10	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	EnsemblPlantsGene:Bra038040	EnsemblPlants:Bra038040.1	EnsemblPlants:Bra038040.1-P	InterPro:CG-1_dom	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	InterPro:IPR000048	InterPro:IPR002110	InterPro:IPR005559
InterPro:IPR013783	InterPro:IPR020683	InterPro:IPR036770	InterPro:IQ_motif_EF-hand-BS	InterPro:Ig-like_fold	InterPro:Ig_E-set
UniProt:M4FAC6	PFAM:PF00612	PFAM:PF03859	PFAM:PF12796	PFscan:PS50088	PFscan:PS50096
PFscan:PS50297	PFscan:PS51437	PANTHER:PTHR23335	PANTHER:PTHR23335:SF3	SMART:SM00015	SMART:SM00248
SMART:SM01076	SUPFAM:SSF48403	SUPFAM:SSF81296	UniParc:UPI0002545DEB	SEG:seg	:

Description

AT4G16150 (E=0.0) | calmodulin binding / transcription regulator

Coordinates

chrA08:+:6983351..6987642

Molecular Weight (calculated)

104458.0 Da

IEP (calculated)

7.744

GRAVY (calculated)

-0.531

Length

919 amino acids

Sequence
(BLAST)

001: MAGVDSGRLI GSEIHGFHTL QDLDIRTMLE EAYTRWLRPN EIHALLSNHN YFTINVKPVH LPKSGTIVFF DRKMLRNFRK DGHNWKKKKD GKTIKEAHEH
101: LKVGNEERIH VYYAHGDDNP TFVRRCYWLL DKSQEHIVLV HYRETHEVQA APATPGNSYS SSTTDHVSAK PVTEDINSGV RNACNTARSN SLVARNHEIS
201: LHEINTLDWD ELLVETGMTN QSSPTQDDVL YFTEQLQTAA MGSAQQGNHH AVYNGSTDIP SYLGLGDPVY QNNSPCGARE FSSQHLHCVV DPNQQTRDSS
301: ATVADEQGDA LLNNGYGSQE SFGKWVNNFI SDSPGSVDDP SLEAVYTPGQ ESSAPPAVVH SQSNIPEQVF NITDVSPAWA YSTEKTKILV TGFFHDSFQH
401: FGRSNLFCIC GELRVPAEFL QMGVYRCFLP PQSPGIVNLY LSADGTKPIS QLFSFEHRSV PVIEKVVPQE DQLYKWEEFE FQVRLSHLLF TSSSKISVFS
501: SRISADNLLE AKKLASRTSH LLNSWAYLMK SIQANELPFD QARDPLFELT LKNRLKEWLL EKVIENRNTK EYDSKGLGVI HLCAVLGYTW SILLFSWANI
601: SLDFRDKHGW TALHWAAYYG REKMVAALLS AGARPNLVTD PTKEYLGGCT AADIAQQKGY EGLAAFLAEK CLVAQFRDMK MAGNISGNLE GVKAETSTNP
701: GHSNEEEQSL KDTLAAYRTA AEAAARIQGA FREHELKVRS KAVRFASKEE EAKNIIAAMK IQHAFRNYET RRKIAAAARI QYRFQTWKMR REFLNMRKKA
801: IKIQAVFRGF QVRRQYQKIT WSVGVLEKAI LRWRLKRRGF RGLQVSQPEE KEGTEAVEDF YKTSQKQAED RLERSVVRVQ AMFRSKKAQQ DYRRMKLAHE
901: EAQLEYDGMQ ELNQMDIES

Best Arabidopsis Sequence Match ( AT3G16940.1 )
(BLAST)

001: MDGDGLGRLI GSEIHGFHTL QDLDVQTMLE EAKSRWLRPN EIHAILYNPK YFTINVKPVN LPNSGRIILF DRKMLRNFRK DGHNWKKKKD GRTVKEAHEH
101: LKVGNEERIH VYYAHGEDNT TFVRRCYWLL DKARENIVLV HYRDTQEAAT TSGDSISSPI SVSEQTFPNR VAAEDIDTVV RNHDISLHDI NTLDWDELLV
201: PTDLNNQSAP TVDNLSYFTE PLQNAANGTA EHGNATVADG SLDALLNDGP QSRESFGRWM NSFISESNGS LEDPSFEPMV MPRQDPLAPQ AVFHSHSNIP
301: EQVFNITDVS PAWAYSSEKT KILVTGFLHD SYQHLERSNL YCVCGDFCVP AEYLQAGVYR CIIPPHSPGM VNLYLSADGH KPISQCFRFE HRAVPVLDKT
401: VPEDNQDSKW EEFEFQVRLS HLLFTSSNKL NVLSSKISPH NLRDAKKLAS KTNHLLNSWA YLVKSIQGNK VSFDQAKDHL FELSLKNRLK EWLMEKVLEG
501: RNTLDYDSKG LGVIHLCASL GYTWSVQLFS LSGLSLNFRD KQGWTALHWA AYYGREKMVA ALLSAGARPN LVTDSTKDNL GGCMAADLAQ QNGYDGLAAY
601: LAEKCLVAQF RDMKIAGNIT GDLEACKAEM LNQGTLPEDE QSLKDALAAY RTAAEAAARI QGAFREKALK AARSSVIQFA NKEEEAKSII AAMKIQNAFR
701: KYDTRRKIEA AYRIQCRFQT WKIRREYLNM RRQAIRIQAA FRGLQARRQY KKILWSVGVL EKAVLRWRQK RKGFRGLQVA AEEDSPGEAQ EDFYKTSQRQ
801: AEERLERSVV RVQAMFRSKK AQQDYRRMKL THEEAQLEYG CLEDI

Arabidopsis Description

calmodulin binding;transcription regulators [Source:TAIR;Acc:AT3G16940]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.