Factsheet for GSMUA_Achr5P21190_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P10490_001	Banana	cytosol	77.82	49.4
Solyc01g060140.2.1	Tomato	nucleus	55.45	44.23
CDY45590	Canola	cytosol	25.0	43.32
PGSC0003DMT400011979	Potato	cytosol	55.83	42.31
TraesCS2B01G254000.2	Wheat	cytosol	56.39	40.21
KXG36244	Sorghum	nucleus	57.71	33.59
TraesCS2D01G237300.2	Wheat	cytosol	56.2	32.97
TraesCS2A01G229400.1	Wheat	nucleus	56.2	32.97
Os07t0490200-01	Rice	nucleus	57.33	32.9
Solyc12g099340.1.1	Tomato	nucleus	56.39	32.79
AT3G16940.1	Thale cress	nucleus	50.94	32.07
HORVU2Hr1G051690.3	Barley	cytosol	55.08	31.92
VIT_05s0077g01240.t01	Wine grape	cytosol	55.08	31.61
Zm00001d021516_P003	Maize	cytosol, nucleus, plasma membrane	56.77	31.2
Bra022188.1-P	Field mustard	cytosol	49.81	31.18
CDX92108	Canola	cytosol	49.81	31.07
KRH50762	Soybean	nucleus	53.57	30.94
KRH11981	Soybean	nucleus	52.63	30.74
KRH02327	Soybean	nucleus	53.2	30.69
CDX95894	Canola	cytosol	49.06	30.6
Bra038040.1-P	Field mustard	nucleus	52.82	30.58
CDY22778	Canola	nucleus	52.82	30.58
CDY58036	Canola	nucleus	52.82	30.58
KRH37009	Soybean	nucleus	52.26	30.52
GSMUA_Achr8P00690_001	Banana	endoplasmic reticulum	27.82	18.97
GSMUA_AchrUn_...	Banana	cytosol	32.52	18.87
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, golgi	28.01	18.86
GSMUA_Achr6P10390_001	Banana	nucleus	33.65	16.81
GSMUA_Achr3P08460_001	Banana	nucleus	30.64	16.65
GSMUA_Achr9P01330_001	Banana	nucleus	31.58	15.85
GSMUA_Achr8P09270_001	Banana	endoplasmic reticulum, nucleus	28.57	13.44
GSMUA_Achr3P21310_001	Banana	nucleus	3.38	7.53
GSMUA_Achr5P21200_001	Banana	cytosol	1.69	6.12
GSMUA_AchrUn_...	Banana	nucleus	1.13	2.59
GSMUA_Achr1P21540_001	Banana	nucleus	0.75	1.65
Solyc01g060170.2.1	Tomato	nucleus	0.38	1.26
TraesCS2B01G254100.1	Wheat	cytosol	0.19	0.72
GSMUA_AchrUn_...	Banana	nucleus	0.19	0.44
GSMUA_AchrUn_...	Banana	cytosol	0.0	0.0
CDY69566	Canola	nucleus	0.0	0.0
GSMUA_Achr8P00680_001	Banana	mitochondrion	0.0	0.0

Protein Annotations

Gene3D:1.20.5.190	Gene3D:1.25.40.20	MapMan:15.5.26	Gene3D:2.60.40.10	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSMUA_Achr5G21190_001	EnsemblPlants:GSMUA_Achr5P21190_001
EnsemblPlants:GSMUA_Achr5T21190_001	InterPro:IPR000048	InterPro:IPR002110	InterPro:IPR013783	InterPro:IPR020683	InterPro:IPR036770
InterPro:IQ_motif_EF-hand-BS	InterPro:Ig-like_fold	InterPro:Ig_E-set	UniProt:M0T0E8	InterPro:P-loop_NTPase	PFAM:PF00612
PFAM:PF12796	PFscan:PS50088	PFscan:PS50096	PFscan:PS50297	PANTHER:PTHR23335	PANTHER:PTHR23335:SF3
SMART:SM00015	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF52540	SUPFAM:SSF81296	UniParc:UPI000295A6AF
SEG:seg	:	:	:	:	:

Description

Calmodulin-binding transcription activator 5 [Source:GMGC_GENE;Acc:GSMUA_Achr5G21190_001]

Coordinates

chr5:-:23161613..23179945

Molecular Weight (calculated)

60463.2 Da

IEP (calculated)

10.068

GRAVY (calculated)

-0.351

Length

532 amino acids

Sequence
(BLAST)

001: MATSMGDHVF NITEISPGWS YSTEETKVVV VGHFCESKKH LMSSSIYCVV GEICVKAEMV QPGIYRCKVS PQPPGLVNLY LTMDGHTPVS QVLSFDYRCS
101: PNIQLDGQIF PSEDDRNKLK WEDYQVQKRL AHLLFATSNN TSILSSRIPL KSLNEAKRFA MLTSSLIEKD WTNFLKLDST NKFSSASTRE NLLELVLRNK
201: LQEWLLVKVA EGCETPGHDS QGHGVIHLCA ILNYAWAVRL YSLSGLSLDF RDIHGWTALH WAAYCGREKM VATLLSAGAN PSLVTDPTSE TRGGCIAADL
301: ASKQGYEGLA AYLAEKGLTA HFQAMTLSGN ITKHGMPTTN TLADSENVER ALKLQTKAVQ LVKPEMEASQ IVAALKIQHA FRNHNRWKLM KAAARIQSHF
401: HTWKIRRDFV NMRKKAIKIQ AAFRGHRVRK QYRKIVWSVG VLEKALLRWR LKRKGLRGVQ VKTTKTMNMT PESTGEEEFY RISRVQAEER MQRSVVRVQA
501: MFRSYRAQQE YRRMKMAHEQ AKLEFCDMGQ LQ

Best Arabidopsis Sequence Match ( AT3G16940.3 )
(BLAST)

001: MLEEAKSRWL RPNEIHAILY NPKYFTINVK PVNLPNSGRI ILFDRKMLRN FRKDGHNWKK KKDGRTVKEA HEHLKVGNEE RIHVYYAHGE DNTTFVRRCY
101: WLLDKARENI VLVHYRDTQE AATTSGDSIS SPISVSEQTF PNRVAAEDID TVVRNHDISL HDINTLDWDE LLVPTDLNNQ SAPTVDNLSY FTEPLQNAAN
201: GTAEHGNATV ADGSLDALLN DGPQSRESFG RWMNSFISES NGSLEDPSFE PMVMPRQDPL APQAVFHSHS NIPEQVFNIT DVSPAWAYSS EKTKILVTGF
301: LHDSYQHLER SNLYCVCGDF CVPAEYLQAG VYRCIIPPHS PGMVNLYLSA DGHKPISQCF RFEHRAVPVL DKTVPEDNQD SKWEEFEFQV RLSHLLFTSS
401: NKLNVLSSKI SPHNLRDAKK LASKTNHLLN SWAYLVKSIQ GNKVSFDQAK DHLFELSLKN RLKEWLMEKV LEGRNTLDYD SKGLGVIHLC ASLGYTWSVQ
501: LFSLSGLSLN FRDKQGWTAL HWAAYYGREK MVAALLSAGA RPNLVTDSTK DNLGGCMAAD LAQQNGYDGL AAYLAEKCLV AQFRDMKIAG NITGDLEACK
601: AEMLNQGTLP EDEQSLKDAL AAYRTAAEAA ARIQGAFREK ALKAARSSVI QFANKEEEAK SIIAAMKIQN AFRKYDTRRK IEAAYRIQCR FQTWKIRREY
701: LNMRRQAIRI QAAFRGLQAR RQYKKILWSV GVLEKAVLRW RQKRKGFRGL QVAAEEDSPG EAQEDFYKTS QRQAEERLER SVVRVQAMFR SKKAQQDYRR
801: MKLTHEEAQL EYGCLEDI

Arabidopsis Description

calmodulin binding;transcription regulators [Source:TAIR;Acc:AT3G16940]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.