Factsheet for GSMUA_AchrUn_randomP00940_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 6
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P00690_001	Banana	endoplasmic reticulum	52.78	53.46
GSMUA_Achr8P09270_001	Banana	endoplasmic reticulum, nucleus	57.97	40.5
EES01985	Sorghum	nucleus	43.16	40.35
TraesCS3B01G469100.2	Wheat	cytosol	38.86	38.14
TraesCS3A01G433300.2	Wheat	nucleus	39.49	38.0
TraesCS3D01G426700.5	Wheat	nucleus	38.99	37.65
Os01t0923600-02	Rice	nucleus	40.76	36.67
GSMUA_Achr9P01330_001	Banana	nucleus	48.73	36.32
Zm00001d042313_P004	Maize	nucleus	40.25	35.65
HORVU3Hr1G094860.7	Barley	cytosol, nucleus, plastid	38.1	35.62
GSMUA_Achr5P21190_001	Banana	cytosol	18.86	28.01
GSMUA_Achr3P08460_001	Banana	nucleus	32.41	26.15
GSMUA_AchrUn_...	Banana	cytosol	27.85	23.99
GSMUA_Achr8P10490_001	Banana	cytosol	25.32	23.87
GSMUA_Achr8P00680_001	Banana	mitochondrion	4.05	23.02
GSMUA_Achr6P10390_001	Banana	nucleus	31.01	23.0
GSMUA_Achr3P21310_001	Banana	nucleus	6.46	21.34
GSMUA_AchrUn_...	Banana	nucleus	5.95	20.26
GSMUA_Achr1P21540_001	Banana	nucleus	5.44	17.7
GSMUA_Achr5P21200_001	Banana	cytosol	3.29	17.69
GSMUA_AchrUn_...	Banana	nucleus	5.06	17.47
GSMUA_AchrUn_...	Banana	cytosol	1.14	8.82

Protein Annotations

Gene3D:1.20.5.190	Gene3D:1.25.40.20	MapMan:15.5.26	Gene3D:2.60.40.10	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	InterPro:CG-1_dom	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSMUA_AchrUn_randomG00940_001	EnsemblPlants:GSMUA_AchrUn_randomP00940_001	EnsemblPlants:GSMUA_AchrUn_randomT00940_001	InterPro:IPR000048
InterPro:IPR002110	InterPro:IPR005559	InterPro:IPR013783	InterPro:IPR020683	InterPro:IPR036770	InterPro:IPT_dom
InterPro:IQ_motif_EF-hand-BS	InterPro:Ig-like_fold	InterPro:Ig_E-set	UniProt:M0U5A6	PFAM:PF00612	PFAM:PF01833
PFAM:PF03859	PFAM:PF12796	PFscan:PS50088	PFscan:PS50096	PFscan:PS50297	PFscan:PS51437
PANTHER:PTHR23335	PANTHER:PTHR23335:SF1	SMART:SM00015	SMART:SM00248	SMART:SM01076	SUPFAM:SSF48403
SUPFAM:SSF81296	TMHMM:TMhelix	UniParc:UPI000296883D	SEG:seg	:	:

Description

Putative Calmodulin-binding transcription activator 4 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG00940_001]

Coordinates

chrchrUn_random:-:3383244..3396603

Molecular Weight (calculated)

88688.4 Da

IEP (calculated)

6.739

GRAVY (calculated)

-0.328

Length

790 amino acids

Sequence
(BLAST)

001: MIFVWSVFDT LANLVYFLVM LLMNFMLIHC LNMHTHCQIG NYEAINCYYA HGEPNSCFQR RSYWMLDPAF DHIVLVHYRD VIKGRHIPKS IVSSSIDSCP
101: TLRYSTSVSN DQAQGIHSCT IEFNDPCQNS CSPGSVEEII SQVTGGNIKI QALRKLEEQL SLDKDKDSFA SSEEELPPFC NLNVETHNTQ DETRSPKEEA
201: LQNPLDKFQQ MSNGTGETAP SAEISEFSSL FTDMWFDQSQ FGAPRRTESG LTLAERHLFT IREVVPEWAF SSEPTKVIIT GDFHCSPFEH TWTVLFGDIE
301: VPLEIVQDGV FRCLTPQQSA RKVKLCITSG NSQPCSEPHE FEFREKPEKA SCSSTSVGAV ATKISAELLS LVKFMQILFS SASNPQEDLE LEVDPLRKLE
401: GSKNQLEPII EALLSGSMAP EKIMNAILQE LLKDKLHQWL SFKHQGATEK DHLLSKQEQC IIHMISALGY QWALLPILKS GVCINYRDSN GWTALHWAAS
501: SGREEMVAAL LAAGASAGVV TNPSAHDPAG KTPASLAAAS GHKGLAGYLS EAALTSHLFS LTTERNERFE ESAYVEDQLS LKDSLAAVRN AVQAAARIQA
601: AFRAYSFRRK QQEAAICMSP AGVHELSVAS RSHKAFYGFS DKKYEQAALS IQRNYQRWKR RKEFLQKRRC IVKIQAHVRG RLARENYKEL LWSVGVLEKA
701: LLRWHRRGVG LRGFQAEPEY IDEEEDDIVK VLRRQNLDTA INEAVFKVTS VVGSPRARQQ YRRMLESYQQ VKDSIILSSP KGPDSASTKS

Best Arabidopsis Sequence Match ( AT1G67310.1 )
(BLAST)

0001: MSSVAEDNSF TCDIATIFVA ICRNPPANPS DSLFQYEIST LYQEAHSRWL KPPEVLFILQ NHESLTLTNT APQRPTSGSL LLFNKRVLKF FRKDGHQWRR
0101: KRDGRAIAEA HERLKVGNAE ALNCYYAHGE QDPTFRRRIY WMLDPEYEHI VLVHYRDVSE REEGQQTGGQ VYQFAPILST QNVSYNQYIG DSSDIYQQSS
0201: TSPGVAEVNS NLEGSASSSE FGQALKMLKE QLSIGDEHVN SVDPHYIQPE SLDSLQFLEY SDIDHLAQPT TVYQRPENNK LERCYGGNFG AQYSAKNDSN
0301: KLERCYGGYV GGAEYHSSNL MLVKNGSGPS GGTGGSGDQG SESWKDVLEA CEASIPLNSE GSTPSSAKGL LAGLQEDSNW SYSNQVDQST FLLPQDLGSF
0401: QLPASYSALV APENNGEYCG MMEDGMKIGL PFEQEMRVTG AHNQKFTIQD ISPDWGYANE TTKVIIIGSF LCDPTESTWS CMFGNAQVPF EIIKEGVIRC
0501: EAPQCGPGKV NLCITSGDGL LCSEIREFEY REKPDTCCPK CSEPQTSDMS TSPNELILLV RFVQTLLSDR SSERKSNLES GNDKLLTKLK ADDDQWRHVI
0601: GTIIDGSASS TSTVDWLLQE LLKDKLDTWL SSRSCDEDYI TCSLSKQEQG IIHMVAGLGF EWAFYPILAH GVNVDFRDIK GWSALHWAAQ FGSEKMVAAL
0701: IASGASAGAV TDPSRQDPNG KTAASIAASN GHKGLAGYLS EVALTNHLSS LTLEETENSK DTAQVQTEKT LNSISEQSPS GNEDQVSLKD TLAAVRNAAQ
0801: AAARIQAAFR AHSFRKRKQR EAALVACLQE YGMYCEDIEG ISAMSKLTFG KGRNYNSAAL SIQKNFRGYK DRKCFLELRQ KVVKIQAHVR GYQIRKNYKV
0901: ICWAVRILDK VVLRWRRKGV GLRGFRQDVE STEDSEDEDI LKVFRKQKVD VAVNEAFSRV LSMSNSPEAR QQYHRVLKRY CQTKAELGKT ETLVGEDDDG
1001: LFDIADMEYD TLFSLP

Arabidopsis Description

CAMTA4Calmodulin-binding transcription activator 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYG2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.