Factsheet for GSMUA_Achr5P21200_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G254100.1	Wheat	cytosol	59.18	63.04
Solyc01g060170.2.1	Tomato	nucleus	61.22	56.6
GSMUA_Achr8P00680_001	Banana	mitochondrion	40.14	42.45
GSMUA_AchrUn_...	Banana	cytosol	27.89	40.2
CDY69566	Canola	nucleus	58.5	31.5
GSMUA_AchrUn_...	Banana	nucleus	44.22	28.38
GSMUA_AchrUn_...	Banana	nucleus	43.54	27.59
GSMUA_Achr3P21310_001	Banana	nucleus	44.22	27.2
GSMUA_Achr1P21540_001	Banana	nucleus	42.86	25.93
GSMUA_Achr8P10490_001	Banana	cytosol	71.43	12.53
Bra022188.1-P	Field mustard	cytosol	61.22	10.59
CDX95894	Canola	cytosol	61.22	10.55
CDX92108	Canola	cytosol	61.22	10.55
AT3G16940.1	Thale cress	nucleus	60.54	10.53
KXG36244	Sorghum	nucleus	65.31	10.5
TraesCS2D01G237300.2	Wheat	cytosol	64.63	10.47
TraesCS2A01G229400.1	Wheat	nucleus	63.95	10.36
Os07t0490200-01	Rice	nucleus	65.31	10.36
HORVU2Hr1G051690.3	Barley	cytosol	63.95	10.24
CDY58036	Canola	nucleus	62.59	10.01
Bra038040.1-P	Field mustard	nucleus	62.59	10.01
CDY22778	Canola	nucleus	62.59	10.01
KRH37009	Soybean	nucleus	61.9	9.99
KRH11981	Soybean	nucleus	61.22	9.88
KRH02327	Soybean	nucleus	61.22	9.76
Solyc12g099340.1.1	Tomato	nucleus	60.54	9.73
VIT_05s0077g01240.t01	Wine grape	cytosol	61.22	9.71
KRH50762	Soybean	nucleus	60.54	9.66
Zm00001d021516_P003	Maize	cytosol, nucleus, plasma membrane	50.34	7.64
GSMUA_Achr3P08460_001	Banana	nucleus	44.22	6.64
GSMUA_Achr6P10390_001	Banana	nucleus	46.26	6.38
GSMUA_Achr9P01330_001	Banana	nucleus	41.5	5.75
GSMUA_Achr8P09270_001	Banana	endoplasmic reticulum, nucleus	42.18	5.48
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, golgi	17.69	3.29
GSMUA_Achr5P21190_001	Banana	cytosol	6.12	1.69
Solyc01g060140.2.1	Tomato	nucleus	6.8	1.5
GSMUA_Achr8P00690_001	Banana	endoplasmic reticulum	4.08	0.77
TraesCS2B01G254000.2	Wheat	cytosol	3.4	0.67
PGSC0003DMT400011979	Potato	cytosol	2.72	0.57
GSMUA_AchrUn_...	Banana	cytosol	1.36	0.22
CDY45590	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr5P21200_001	EnsemblPlants:GSMUA_Achr5T21200_001	EnsemblPlantsGene:GSMUA_Achr5G21200_001	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	InterPro:CG-1_dom
InterPro:IPR005559	PANTHER:PTHR23335	PANTHER:PTHR23335:SF3	PFAM:PF03859	PFscan:PS51437	SMART:SM01076
UniParc:UPI000294FFD5	UniProt:M0T0E9	MapMan:35.1	:	:	:

Description

Calmodulin-binding transcription activator 5 [Source:GMGC_GENE;Acc:GSMUA_Achr5G21200_001]

Coordinates

chr5:-:23208344..23219561

Molecular Weight (calculated)

17381.7 Da

IEP (calculated)

9.294

GRAVY (calculated)

-0.588

Length

147 amino acids

Sequence
(BLAST)

001: MEAGDSGLLA GAEIHGFRTV ADLDIEKLFE DASTRWFRPN EVHAILSNYT LFKIQPQPID NPTSGRVLLF DRKMLRNFRK DGHNWKKKKD GKTVQEAHEK
101: LKIGNEDRIH VYYARSEYDP NFYRRCYWLL DKYVLFMSIF LNFAFGQ

Best Arabidopsis Sequence Match ( AT3G16940.1 )
(BLAST)

001: MDGDGLGRLI GSEIHGFHTL QDLDVQTMLE EAKSRWLRPN EIHAILYNPK YFTINVKPVN LPNSGRIILF DRKMLRNFRK DGHNWKKKKD GRTVKEAHEH
101: LKVGNEERIH VYYAHGEDNT TFVRRCYWLL DKARENIVLV HYRDTQEAAT TSGDSISSPI SVSEQTFPNR VAAEDIDTVV RNHDISLHDI NTLDWDELLV
201: PTDLNNQSAP TVDNLSYFTE PLQNAANGTA EHGNATVADG SLDALLNDGP QSRESFGRWM NSFISESNGS LEDPSFEPMV MPRQDPLAPQ AVFHSHSNIP
301: EQVFNITDVS PAWAYSSEKT KILVTGFLHD SYQHLERSNL YCVCGDFCVP AEYLQAGVYR CIIPPHSPGM VNLYLSADGH KPISQCFRFE HRAVPVLDKT
401: VPEDNQDSKW EEFEFQVRLS HLLFTSSNKL NVLSSKISPH NLRDAKKLAS KTNHLLNSWA YLVKSIQGNK VSFDQAKDHL FELSLKNRLK EWLMEKVLEG
501: RNTLDYDSKG LGVIHLCASL GYTWSVQLFS LSGLSLNFRD KQGWTALHWA AYYGREKMVA ALLSAGARPN LVTDSTKDNL GGCMAADLAQ QNGYDGLAAY
601: LAEKCLVAQF RDMKIAGNIT GDLEACKAEM LNQGTLPEDE QSLKDALAAY RTAAEAAARI QGAFREKALK AARSSVIQFA NKEEEAKSII AAMKIQNAFR
701: KYDTRRKIEA AYRIQCRFQT WKIRREYLNM RRQAIRIQAA FRGLQARRQY KKILWSVGVL EKAVLRWRQK RKGFRGLQVA AEEDSPGEAQ EDFYKTSQRQ
801: AEERLERSVV RVQAMFRSKK AQQDYRRMKL THEEAQLEYG CLEDI

Arabidopsis Description

calmodulin binding;transcription regulators [Source:TAIR;Acc:AT3G16940]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.