Factsheet for GSMUA_Achr9P01330_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	5.57	57.84
Zm00001d003958_P013	Maize	nucleus	52.36	56.69
OQU81398	Sorghum	nucleus	53.21	56.68
TraesCS2B01G300800.2	Wheat	nucleus	53.4	55.06
TraesCS2A01G283800.1	Wheat	nucleus	53.11	54.82
Os04t0388500-01	Rice	nucleus	51.7	54.64
TraesCS2D01G282800.6	Wheat	nucleus	52.92	54.47
HORVU2Hr1G069950.6	Barley	nucleus	52.55	54.39
Zm00001d025235_P004	Maize	nucleus	51.32	54.24
GSMUA_Achr8P00680_001	Banana	mitochondrion	6.98	53.24
Zm00001d009281_P001	Maize	cytosol	9.34	50.0
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, golgi	36.32	48.73
GSMUA_Achr8P00690_001	Banana	endoplasmic reticulum	35.0	47.56
GSMUA_AchrUn_...	Banana	nucleus	9.25	42.24
GSMUA_Achr5P21200_001	Banana	cytosol	5.75	41.5
GSMUA_Achr8P09270_001	Banana	endoplasmic reticulum, nucleus	43.49	40.76
GSMUA_Achr3P21310_001	Banana	nucleus	9.06	40.17
GSMUA_AchrUn_...	Banana	nucleus	8.58	39.74
GSMUA_Achr1P21540_001	Banana	nucleus	8.68	37.86
GSMUA_Achr3P08460_001	Banana	nucleus	31.04	33.61
GSMUA_Achr6P10390_001	Banana	nucleus	32.55	32.39
GSMUA_Achr8P10490_001	Banana	cytosol	25.0	31.62
GSMUA_Achr5P21190_001	Banana	cytosol	15.85	31.58
GSMUA_AchrUn_...	Banana	cytosol	25.19	29.12

Protein Annotations

Gene3D:1.20.5.190	Gene3D:1.25.40.20	MapMan:15.5.26	Gene3D:2.60.40.10	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	InterPro:CG-1_dom	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	EnsemblPlantsGene:GSMUA_Achr9G01330_001
EnsemblPlants:GSMUA_Achr9P01330_001	EnsemblPlants:GSMUA_Achr9T01330_001	InterPro:IPR000048	InterPro:IPR002110	InterPro:IPR005559	InterPro:IPR013783
InterPro:IPR020683	InterPro:IPR036770	InterPro:IPT_dom	InterPro:IQ_motif_EF-hand-BS	InterPro:Ig-like_fold	InterPro:Ig_E-set
UniProt:M0TWJ0	InterPro:P-loop_NTPase	PFAM:PF00023	PFAM:PF00612	PFAM:PF01833	PFAM:PF03859
PFscan:PS50088	PFscan:PS50096	PFscan:PS50297	PFscan:PS51437	PANTHER:PTHR23335	PANTHER:PTHR23335:SF1
SMART:SM00015	SMART:SM00248	SMART:SM01076	SUPFAM:SSF48403	SUPFAM:SSF52540	SUPFAM:SSF81296
UniParc:UPI0002955F14	SEG:seg	:	:	:	:

Description

Calmodulin-binding transcription activator 4 [Source:GMGC_GENE;Acc:GSMUA_Achr9G01330_001]

Coordinates

chr9:-:1001083..1020126

Molecular Weight (calculated)

118984.0 Da

IEP (calculated)

5.988

GRAVY (calculated)

-0.537

Length

1060 amino acids

Sequence
(BLAST)

0001: MQHGFDINVL CQEAQKRWLK PSEVFFILQN YKQFPLTPEP PHLPPSGSLF LFNRKVLRFF RKDGYMWRKK KDGRTIGEAH ERLKVGNVDA LSCYYAHGEQ
0101: NPYFQRRIFW MLDPAYGHIV LVHYREVAEG RYVSGSISNF STESCSNLNQ TTSIINADKG INSGTTELNE PYYSPGSTEE VSSKFVLENF EANRNNLLDR
0201: LENPDKKPQP EVNQALRNLA AQLSLDDDDD DDSIYFREVL PAYSTQNEST LGLGHLHYEQ TEFSQAHENL LQGLELRGHG EINEAEKQQS YATTQLPKVL
0301: GDHGAKQSEP LYLESPSWTD VLTSSSSSAG VNRHGRNSNF LALNGILDSS IPKDTLRPFL DREKISANSF VPSENLDCYK AVDQSNGHEI LESDLHLQLS
0401: ATRRFLLGSE NSIESPSSVS HLKASDIHHT SGEITYEASS RKENSTDWMG TIPVTPGNTT YTSEFSSMLF DNNHFGASLG TDSSLTVAQK QRFSIREISP
0501: EWAFSYESTK VIITGDFLCN PLESPWAVMF GDIEVPSEIV QEGVLRCQTP QHSSGKVTLC VTSGNRESCS EVREFEFRTK PTTSSSGDIC TTDAAKNSEE
0601: LLLLARLVQM MLCGYDGSTI AKGAIETQLE NSRKVNTTDE RWQQIIEALQ MGCDISLDTR DWIMQELLKD KLQNWLSLRR QSNEQTGCLL SKQEQGIIHL
0701: ISGLGYEWGL GPILDFGVGI NFRDSNGWTA LHWAAHYGRE KMVAALLAAG ASAGLVTDPT TQDPLGKTPG FLASATGQKG LAGYLSEVAL TSHLSSLVIE
0801: ESEISKGSAE VEAERAVESI SQRSVEIRGG TEDELSLKDS LAAVRNAAQA AARIQAAFRA HSFRKRQLKS AWSCDDYGMT PGDIQELSAA SKGHRLYHGS
0901: HDHNFDKAAL SIQKKYRGWK GRKDFLTLRQ HVVKIQAHVR GHQVRKKYRE FVWTVSVIEK VILRWRRKGV GLRGFRAEPE MVRDEEEEDI TKIFRKQKVD
1001: AAVDEAVSRV LSMVESPDAR QQYRRMLGRY HEAKAEFSNS DEATSRLRDD LEAIDNDFIY

Best Arabidopsis Sequence Match ( AT1G67310.1 )
(BLAST)

0001: MSSVAEDNSF TCDIATIFVA ICRNPPANPS DSLFQYEIST LYQEAHSRWL KPPEVLFILQ NHESLTLTNT APQRPTSGSL LLFNKRVLKF FRKDGHQWRR
0101: KRDGRAIAEA HERLKVGNAE ALNCYYAHGE QDPTFRRRIY WMLDPEYEHI VLVHYRDVSE REEGQQTGGQ VYQFAPILST QNVSYNQYIG DSSDIYQQSS
0201: TSPGVAEVNS NLEGSASSSE FGQALKMLKE QLSIGDEHVN SVDPHYIQPE SLDSLQFLEY SDIDHLAQPT TVYQRPENNK LERCYGGNFG AQYSAKNDSN
0301: KLERCYGGYV GGAEYHSSNL MLVKNGSGPS GGTGGSGDQG SESWKDVLEA CEASIPLNSE GSTPSSAKGL LAGLQEDSNW SYSNQVDQST FLLPQDLGSF
0401: QLPASYSALV APENNGEYCG MMEDGMKIGL PFEQEMRVTG AHNQKFTIQD ISPDWGYANE TTKVIIIGSF LCDPTESTWS CMFGNAQVPF EIIKEGVIRC
0501: EAPQCGPGKV NLCITSGDGL LCSEIREFEY REKPDTCCPK CSEPQTSDMS TSPNELILLV RFVQTLLSDR SSERKSNLES GNDKLLTKLK ADDDQWRHVI
0601: GTIIDGSASS TSTVDWLLQE LLKDKLDTWL SSRSCDEDYI TCSLSKQEQG IIHMVAGLGF EWAFYPILAH GVNVDFRDIK GWSALHWAAQ FGSEKMVAAL
0701: IASGASAGAV TDPSRQDPNG KTAASIAASN GHKGLAGYLS EVALTNHLSS LTLEETENSK DTAQVQTEKT LNSISEQSPS GNEDQVSLKD TLAAVRNAAQ
0801: AAARIQAAFR AHSFRKRKQR EAALVACLQE YGMYCEDIEG ISAMSKLTFG KGRNYNSAAL SIQKNFRGYK DRKCFLELRQ KVVKIQAHVR GYQIRKNYKV
0901: ICWAVRILDK VVLRWRRKGV GLRGFRQDVE STEDSEDEDI LKVFRKQKVD VAVNEAFSRV LSMSNSPEAR QQYHRVLKRY CQTKAELGKT ETLVGEDDDG
1001: LFDIADMEYD TLFSLP

Arabidopsis Description

CAMTA4Calmodulin-binding transcription activator 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYG2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.