Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G282800.6 | Wheat | nucleus | 97.96 | 97.67 |
| TraesCS2B01G300800.2 | Wheat | nucleus | 97.47 | 97.37 |
| HORVU2Hr1G069950.6 | Barley | nucleus | 93.48 | 93.75 |
| Os04t0388500-01 | Rice | nucleus | 74.39 | 76.17 |
| OQU81398 | Sorghum | nucleus | 71.86 | 74.17 |
| Zm00001d003958_P013 | Maize | nucleus | 70.11 | 73.54 |
| Zm00001d025235_P004 | Maize | nucleus | 68.55 | 70.19 |
| Zm00001d009281_P001 | Maize | cytosol | 13.24 | 68.69 |
| GSMUA_Achr9P01330_001 | Banana | nucleus | 54.82 | 53.11 |
| VIT_14s0036g00610.t01 | Wine grape | plastid | 7.5 | 52.03 |
| KRH15615 | Soybean | cytosol | 15.58 | 50.47 |
| PGSC0003DMT400084738 | Potato | cytosol | 31.65 | 47.51 |
| VIT_01s0010g03850.t01 | Wine grape | nucleus | 43.62 | 46.28 |
| Solyc05g015650.2.1 | Tomato | nucleus | 42.06 | 46.2 |
| KRH58784 | Soybean | nucleus | 42.94 | 44.86 |
| KRH31521 | Soybean | nucleus | 39.73 | 44.84 |
| KRH42689 | Soybean | cytosol | 40.99 | 43.63 |
| KRG97392 | Soybean | nucleus | 40.6 | 43.35 |
| Solyc12g035520.1.1 | Tomato | nucleus | 40.99 | 43.27 |
| CDY07431 | Canola | nucleus | 38.66 | 41.14 |
| Bra004096.1-P | Field mustard | nucleus | 38.56 | 40.7 |
| Bra034007.1-P | Field mustard | nucleus | 40.02 | 40.61 |
| CDY28897 | Canola | nucleus | 38.56 | 40.57 |
| CDY51184 | Canola | nucleus | 40.31 | 40.39 |
| Bra004217.1-P | Field mustard | nucleus | 38.95 | 40.12 |
| CDY12637 | Canola | nucleus | 40.12 | 39.85 |
| TraesCS3A01G433300.2 | Wheat | nucleus | 31.65 | 39.59 |
| AT1G67310.1 | Thale cress | cytosol | 39.14 | 39.57 |
| CDY01799 | Canola | nucleus | 38.36 | 38.44 |
| CDX96099 | Canola | nucleus | 38.66 | 31.56 |
| TraesCS2A01G163000.1 | Wheat | cytosol | 29.99 | 30.02 |
| TraesCS2A01G229400.1 | Wheat | nucleus | 25.71 | 29.11 |
| TraesCS4A01G407100.1 | Wheat | cytosol | 30.09 | 28.99 |
| Bra004218.1-P | Field mustard | nucleus | 0.1 | 0.34 |
Protein Annotations
| Gene3D:1.20.5.190 | Gene3D:1.25.40.20 | MapMan:15.5.26 | Gene3D:2.60.40.10 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom |
| InterPro:Ankyrin_rpt-contain_sf | InterPro:CG-1_dom | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:IPR000048 |
| InterPro:IPR002110 | InterPro:IPR005559 | InterPro:IPR013783 | InterPro:IPR020683 | InterPro:IPR036770 | InterPro:IPT_dom |
| InterPro:IQ_motif_EF-hand-BS | InterPro:Ig-like_fold | InterPro:Ig_E-set | InterPro:P-loop_NTPase | PFAM:PF00612 | PFAM:PF01833 |
| PFAM:PF03859 | PFAM:PF13637 | PFscan:PS50088 | PFscan:PS50096 | PFscan:PS50297 | PFscan:PS51437 |
| PANTHER:PTHR23335 | PANTHER:PTHR23335:SF1 | SMART:SM00015 | SMART:SM00248 | SMART:SM01076 | SUPFAM:SSF48403 |
| SUPFAM:SSF52540 | SUPFAM:SSF81296 | EnsemblPlantsGene:TraesCS2A01G283800 | EnsemblPlants:TraesCS2A01G283800.1 | TIGR:cd00102 | TIGR:cd00204 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr2A:+:475870231..475877836
Molecular Weight (calculated)
114430.0 Da
IEP (calculated)
5.273
GRAVY (calculated)
-0.494
Length
1027 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSQILPLVGF DINVLLREAK SRWLKPSEVY YILLNHEQLQ ITHEPLNKPP SGALFLYNRR VNRFFRKDGY AWRRKKDGRT VGEAHERLKV GNIDALSCYY
0101: AHGEQNPYFQ RRCFWMLEPA YDHIVLVQYR EVAEGRYYST LSNGSAGSLS TLSYPNDIHG KHGSTSDFSE GNESHQSSVT EVSSYSANKE YNHDSGVLLS
0201: IPELQQSTVM GMPELDQSSL ERSSEFCMVN NNDSTNTSGL NQALKSIAEQ LSLGDDDYIY INQARSLDFT TNTEAADVQG NQTSNSLGDD EANQIRPEGA
0301: HGVGRGISSS WENVLQSDLG LPASSTYQFG AHYQQSSEYQ PPGGLDGSNL QLQISAAKRF LLGSEDPIDS PSYNFIPRDE GINGINTLSA HDSSLESCLN
0401: PDWQRTTPVT LQSSSYQSNS CGYEISEFFD NGQFEPSSEE DTRLALKQKQ QFSIREISPE WAFCYEITKV IITGDFLCDP SNICWAVMFG DTEVPVEIVQ
0501: PGVLRCHTPL HSAGKLTLCI TTGNRKVCSE IKDFEFRAKS TASSFTDFAP SSMKSTEELS LLAKFARILL CDNGSSAASG DDPQPGQSPK LKMNEDNWQR
0601: LINELDVGCE NPLSRVDWIM EELLKSKLQQ WLSLRLQGDD GTCSLSKNEQ GIIHLISALG YDWALSSVLS AGVGINLRDS NGWTALHWAA YYGREKMVAA
0701: LLAAGASAPA VTDPTAQDPV GKSAAFLASE RGHVGLAGYL SEVALTSYLA SLTIEESGIS EGLAAIKAER AVESISQRSA QLHGGTEDEL SLKDSLAAVR
0801: NAAQAAARIQ NAFRAFSFRR RQHKDARLKD EYGMTQEDID ELAAASRLYY QHHVSNGQFC DKAAVSIQKK YRGWKGRKNF LQMRRNVVKI QAHVRGHQVR
0901: KKYKTFVSTV SVLEKVILRW RRKGHGLRGF RAEQSVMIEA EEGEEEDDDD FEDDEAVKIF RRQKVDESVK ESVSRVLSMV DSPEARMQYR RMLEEFRQAT
1001: AELGASDKAT SSILDNDLLV EINKFTC
0101: AHGEQNPYFQ RRCFWMLEPA YDHIVLVQYR EVAEGRYYST LSNGSAGSLS TLSYPNDIHG KHGSTSDFSE GNESHQSSVT EVSSYSANKE YNHDSGVLLS
0201: IPELQQSTVM GMPELDQSSL ERSSEFCMVN NNDSTNTSGL NQALKSIAEQ LSLGDDDYIY INQARSLDFT TNTEAADVQG NQTSNSLGDD EANQIRPEGA
0301: HGVGRGISSS WENVLQSDLG LPASSTYQFG AHYQQSSEYQ PPGGLDGSNL QLQISAAKRF LLGSEDPIDS PSYNFIPRDE GINGINTLSA HDSSLESCLN
0401: PDWQRTTPVT LQSSSYQSNS CGYEISEFFD NGQFEPSSEE DTRLALKQKQ QFSIREISPE WAFCYEITKV IITGDFLCDP SNICWAVMFG DTEVPVEIVQ
0501: PGVLRCHTPL HSAGKLTLCI TTGNRKVCSE IKDFEFRAKS TASSFTDFAP SSMKSTEELS LLAKFARILL CDNGSSAASG DDPQPGQSPK LKMNEDNWQR
0601: LINELDVGCE NPLSRVDWIM EELLKSKLQQ WLSLRLQGDD GTCSLSKNEQ GIIHLISALG YDWALSSVLS AGVGINLRDS NGWTALHWAA YYGREKMVAA
0701: LLAAGASAPA VTDPTAQDPV GKSAAFLASE RGHVGLAGYL SEVALTSYLA SLTIEESGIS EGLAAIKAER AVESISQRSA QLHGGTEDEL SLKDSLAAVR
0801: NAAQAAARIQ NAFRAFSFRR RQHKDARLKD EYGMTQEDID ELAAASRLYY QHHVSNGQFC DKAAVSIQKK YRGWKGRKNF LQMRRNVVKI QAHVRGHQVR
0901: KKYKTFVSTV SVLEKVILRW RRKGHGLRGF RAEQSVMIEA EEGEEEDDDD FEDDEAVKIF RRQKVDESVK ESVSRVLSMV DSPEARMQYR RMLEEFRQAT
1001: AELGASDKAT SSILDNDLLV EINKFTC
0001: MAEARRFSPV HELDVGQILS EARHRWLRPP EICEILQNYQ RFQISTEPPT TPSSGSVFMF DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKAGSVDVLH
0101: CYYAHGQDNE NFQRRSYWLL QEELSHIVFV HYLEVKGSRV STSFNRMQRT EDAARSPQET GDALTSEHDG YASCSFNQND HSNHSQTTDS ASVNGFHSPE
0201: LEDAESAYNQ HGSSTAYSHQ ELQQPATGGN LTGFDPYYQI SLTPRDSYQK ELRTIPVTDS SIMVDKSKTI NSPGVTNGLK NRKSIDSQTW EEILGNCGSG
0301: VEALPLQPNS EHEVLDQILE SSFTMQDFAS LQESMVKSQN QELNSGLTSD RTVWFQGQDM ELNAISNLAS NEKAPYLSTM KQHLLHGALG EEGLKKMDSF
0401: NRWMSKELGD VGVIADANES FTQSSSRTYW EEVESEDGSN GHNSRRDMDG YVMSPSLSKE QLFSINDFSP SWAYVGCEVV VFVTGKFLKT REETEIGEWS
0501: CMFGQTEVPA DVISNGILQC VAPMHEAGRV PFYVTCSNRL ACSEVREFEY KVAESQVFDR EADDESTIDI LEARFVKLLC SKSENTSPVS GNDSDLSQLS
0601: EKISLLLFEN DDQLDQMLMN EISQENMKNN LLQEFLKESL HSWLLQKIAE GGKGPSVLDE GGQGVLHFAA SLGYNWALEP TIIAGVSVDF RDVNGWTALH
0701: WAAFFGRERI IGSLIALGAA PGTLTDPNPD FPSGSTPSDL AYANGHKGIA GYLSEYALRA HVSLLSLNDK NAETVEMAPS PSSSSLTDSL TAVRNATQAA
0801: ARIHQVFRAQ SFQKKQLKEF GDKKLGMSEE RALSMLAPKT HKSGRAHSDD SVQAAAIRIQ NKFRGYKGRK DYLITRQRII KIQAHVRGYQ FRKNYRKIIW
0901: SVGVLEKVIL RWRRKGAGLR GFKSEALVEK MQDGTEKEED DDFFKQGRKQ TEDRLQKALA RVKSMVQYPE ARDQYRRLLN VVNDIQESKV EKALENSEAT
1001: CFDDDDDLID IEALLEDDDT LMLPMSSSLW TS
0101: CYYAHGQDNE NFQRRSYWLL QEELSHIVFV HYLEVKGSRV STSFNRMQRT EDAARSPQET GDALTSEHDG YASCSFNQND HSNHSQTTDS ASVNGFHSPE
0201: LEDAESAYNQ HGSSTAYSHQ ELQQPATGGN LTGFDPYYQI SLTPRDSYQK ELRTIPVTDS SIMVDKSKTI NSPGVTNGLK NRKSIDSQTW EEILGNCGSG
0301: VEALPLQPNS EHEVLDQILE SSFTMQDFAS LQESMVKSQN QELNSGLTSD RTVWFQGQDM ELNAISNLAS NEKAPYLSTM KQHLLHGALG EEGLKKMDSF
0401: NRWMSKELGD VGVIADANES FTQSSSRTYW EEVESEDGSN GHNSRRDMDG YVMSPSLSKE QLFSINDFSP SWAYVGCEVV VFVTGKFLKT REETEIGEWS
0501: CMFGQTEVPA DVISNGILQC VAPMHEAGRV PFYVTCSNRL ACSEVREFEY KVAESQVFDR EADDESTIDI LEARFVKLLC SKSENTSPVS GNDSDLSQLS
0601: EKISLLLFEN DDQLDQMLMN EISQENMKNN LLQEFLKESL HSWLLQKIAE GGKGPSVLDE GGQGVLHFAA SLGYNWALEP TIIAGVSVDF RDVNGWTALH
0701: WAAFFGRERI IGSLIALGAA PGTLTDPNPD FPSGSTPSDL AYANGHKGIA GYLSEYALRA HVSLLSLNDK NAETVEMAPS PSSSSLTDSL TAVRNATQAA
0801: ARIHQVFRAQ SFQKKQLKEF GDKKLGMSEE RALSMLAPKT HKSGRAHSDD SVQAAAIRIQ NKFRGYKGRK DYLITRQRII KIQAHVRGYQ FRKNYRKIIW
0901: SVGVLEKVIL RWRRKGAGLR GFKSEALVEK MQDGTEKEED DDFFKQGRKQ TEDRLQKALA RVKSMVQYPE ARDQYRRLLN VVNDIQESKV EKALENSEAT
1001: CFDDDDDLID IEALLEDDDT LMLPMSSSLW TS
Arabidopsis Description
CAMTA3Calmodulin-binding transcription activator 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8GSA7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.