Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g015650.2.1 | Tomato | nucleus | 69.48 | 72.3 |
| VIT_01s0010g03850.t01 | Wine grape | nucleus | 56.53 | 56.82 |
| VIT_14s0036g00610.t01 | Wine grape | plastid | 8.63 | 56.76 |
| KRH58784 | Soybean | nucleus | 56.12 | 55.54 |
| GSMUA_AchrUn_... | Banana | cytosol | 5.76 | 54.9 |
| KRH42689 | Soybean | cytosol | 53.96 | 54.4 |
| GSMUA_Achr8P00680_001 | Banana | mitochondrion | 7.71 | 53.96 |
| AT1G67310.1 | Thale cress | cytosol | 50.67 | 48.52 |
| Bra034007.1-P | Field mustard | nucleus | 49.74 | 47.83 |
| CDY51184 | Canola | nucleus | 49.74 | 47.22 |
| CDY12637 | Canola | nucleus | 50.15 | 47.2 |
| Bra004217.1-P | Field mustard | nucleus | 48.1 | 46.94 |
| CDY07431 | Canola | nucleus | 46.25 | 46.63 |
| Bra004096.1-P | Field mustard | nucleus | 46.25 | 46.25 |
| CDY28897 | Canola | nucleus | 46.35 | 46.21 |
| CDY01799 | Canola | nucleus | 48.51 | 46.05 |
| Zm00001d009281_P001 | Maize | cytosol | 8.84 | 43.43 |
| Solyc01g060170.2.1 | Tomato | nucleus | 6.99 | 42.77 |
| Zm00001d003958_P013 | Maize | nucleus | 41.93 | 41.68 |
| OQU81398 | Sorghum | nucleus | 42.45 | 41.51 |
| TraesCS2B01G300800.2 | Wheat | nucleus | 43.47 | 41.15 |
| Os04t0388500-01 | Rice | nucleus | 42.34 | 41.08 |
| TraesCS2A01G283800.1 | Wheat | nucleus | 43.27 | 40.99 |
| EES01985 | Sorghum | nucleus | 35.46 | 40.83 |
| HORVU2Hr1G069950.6 | Barley | nucleus | 42.96 | 40.82 |
| TraesCS2D01G282800.6 | Wheat | nucleus | 43.06 | 40.68 |
| Zm00001d025235_P004 | Maize | nucleus | 41.93 | 40.68 |
| Os01t0923600-02 | Rice | nucleus | 34.53 | 38.27 |
| TraesCS3A01G433300.2 | Wheat | nucleus | 31.65 | 37.52 |
| TraesCS3B01G469100.2 | Wheat | cytosol | 30.63 | 37.02 |
| TraesCS3D01G426700.5 | Wheat | nucleus | 31.04 | 36.92 |
| CDX96099 | Canola | nucleus | 47.58 | 36.8 |
| Zm00001d042313_P004 | Maize | nucleus | 33.4 | 36.44 |
| HORVU3Hr1G094860.7 | Barley | cytosol, nucleus, plastid | 31.24 | 35.98 |
| Solyc01g057270.2.1 | Tomato | nucleus | 31.24 | 31.77 |
| Solyc04g056270.2.1 | Tomato | nucleus | 32.37 | 30.85 |
| Solyc01g105230.2.1 | Tomato | nucleus | 31.65 | 29.62 |
| Solyc12g099340.1.1 | Tomato | nucleus | 26.72 | 28.42 |
| Solyc01g060140.2.1 | Tomato | nucleus | 19.32 | 28.19 |
| Bra004218.1-P | Field mustard | nucleus | 0.21 | 0.68 |
Protein Annotations
| Gene3D:1.20.5.190 | Gene3D:1.25.40.20 | MapMan:15.5.26 | Gene3D:2.60.40.10 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom |
| InterPro:Ankyrin_rpt-contain_sf | InterPro:CG-1_dom | ncoils:Coil | GO:GO:0001077 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006366 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | GO:GO:0045944 | InterPro:IPR000048 | InterPro:IPR002110 |
| InterPro:IPR005559 | InterPro:IPR013783 | InterPro:IPR020683 | InterPro:IPR036770 | InterPro:IPT_dom | InterPro:IQ_motif_EF-hand-BS |
| InterPro:Ig-like_fold | InterPro:Ig_E-set | UniProt:K4DE13 | InterPro:P-loop_NTPase | PFAM:PF00612 | PFAM:PF01833 |
| PFAM:PF03859 | PFAM:PF12796 | PFscan:PS50088 | PFscan:PS50096 | PFscan:PS50297 | PFscan:PS51437 |
| PANTHER:PTHR23335 | PANTHER:PTHR23335:SF1 | SMART:SM00015 | SMART:SM01076 | SUPFAM:SSF48403 | SUPFAM:SSF52540 |
| SUPFAM:SSF81296 | EnsemblPlantsGene:Solyc12g035520.1 | EnsemblPlants:Solyc12g035520.1.1 | UniParc:UPI0002769E7C | SEG:seg | : |
Description
No Description!
Coordinates
chr12:-:57432994..57457836
Molecular Weight (calculated)
108988.0 Da
IEP (calculated)
6.676
GRAVY (calculated)
-0.458
Length
973 amino acids
Sequence
(BLAST)
(BLAST)
001: MAESGYNTND LVQEGRFRWL RPAEVLFILQ NHDDRQLAHQ PPQKPASGSM FLFNKRVLRY FRKDGHSWRK KKDGRTVGEA HERLKVGNAE ALNCYYAHGE
101: KNSNFQRRSY WILDPAYEHI VLVHYRDITE GRQIAAFMSQ SSPISSTFPL SPSLYSTQHP GFNVPGTESY QQYQDESRPG YGEICSDAVI HSNGMNVSDI
201: TRMMEGVSNS PKVEISQALR RLEEQLNLND DSSSDIYSLY SEIENSNDAE NVVHDKSSLV QIQDNSNNFL FLPHSGESSE SRDQLLNLDN SMWKEMLDHC
301: RSSPASQPQA KCFEKLDENG MLQTSSGSEP IEAIKSDRWP IIGGKEALKC SVTNLKQVDD FKYIGCAQIN VFGSYPDQCT TIFDQDQIGI SSETNMSLTI
401: VQKQKFTIHD ISPDWGYASD ATKVVIIGSY LCNPSEYTWT CMFGDTEVPV QIIKDGAIRC QAPPHLPGKV ALCVTTGNRT PCSEVREFEY RAKFDDRGQN
501: VVPEVGGASK SSEELLLLVR FVQMLLSDSS VQIGDGSELS NDILEKSKAS EDSWSQVIES LLFGTSTSTV TIDWLLQELL KNKLQQWLSS KLQVKNNEMV
601: YSLSRKDQGI VHMIAGLGFE WALHPVLNAG VSANFRDIRG WTALHWAARF GREKMVASLI ASGAFAGAVT DPSSQDPFGK TAASIASSCG HKGVAGYLSE
701: VALTSHLTSL TLEECDVSKG TADIEAEQTI SNITTTSPVT HEDQLSLKDT LDAVRNAAQA AARIQSAFRA HSFRKRRLRE AAHVATTCRD EYCILSNDVL
801: GLSAASKLAF RNVRDYNSAA LSIQRKYRGW KGRKDFLVFR QKVVKIQAHV RGYQVRKEYK VCWAVGILEK VVLRWRRRGV GLRGFRLEDE PIEESENEDI
901: LKLFRKQKVD AAINEAVSRV LSMVDSPEAR QQYRRILEKY RQAKAEVAGA KSDAISTAHS DISNVENNDV YHS
101: KNSNFQRRSY WILDPAYEHI VLVHYRDITE GRQIAAFMSQ SSPISSTFPL SPSLYSTQHP GFNVPGTESY QQYQDESRPG YGEICSDAVI HSNGMNVSDI
201: TRMMEGVSNS PKVEISQALR RLEEQLNLND DSSSDIYSLY SEIENSNDAE NVVHDKSSLV QIQDNSNNFL FLPHSGESSE SRDQLLNLDN SMWKEMLDHC
301: RSSPASQPQA KCFEKLDENG MLQTSSGSEP IEAIKSDRWP IIGGKEALKC SVTNLKQVDD FKYIGCAQIN VFGSYPDQCT TIFDQDQIGI SSETNMSLTI
401: VQKQKFTIHD ISPDWGYASD ATKVVIIGSY LCNPSEYTWT CMFGDTEVPV QIIKDGAIRC QAPPHLPGKV ALCVTTGNRT PCSEVREFEY RAKFDDRGQN
501: VVPEVGGASK SSEELLLLVR FVQMLLSDSS VQIGDGSELS NDILEKSKAS EDSWSQVIES LLFGTSTSTV TIDWLLQELL KNKLQQWLSS KLQVKNNEMV
601: YSLSRKDQGI VHMIAGLGFE WALHPVLNAG VSANFRDIRG WTALHWAARF GREKMVASLI ASGAFAGAVT DPSSQDPFGK TAASIASSCG HKGVAGYLSE
701: VALTSHLTSL TLEECDVSKG TADIEAEQTI SNITTTSPVT HEDQLSLKDT LDAVRNAAQA AARIQSAFRA HSFRKRRLRE AAHVATTCRD EYCILSNDVL
801: GLSAASKLAF RNVRDYNSAA LSIQRKYRGW KGRKDFLVFR QKVVKIQAHV RGYQVRKEYK VCWAVGILEK VVLRWRRRGV GLRGFRLEDE PIEESENEDI
901: LKLFRKQKVD AAINEAVSRV LSMVDSPEAR QQYRRILEKY RQAKAEVAGA KSDAISTAHS DISNVENNDV YHS
0001: MSSVAEDNSF TCDIATIFVA ICRNPPANPS DSLFQYEIST LYQEAHSRWL KPPEVLFILQ NHESLTLTNT APQRPTSGSL LLFNKRVLKF FRKDGHQWRR
0101: KRDGRAIAEA HERLKVGNAE ALNCYYAHGE QDPTFRRRIY WMLDPEYEHI VLVHYRDVSE REEGQQTGGQ VYQFAPILST QNVSYNQYIG DSSDIYQQSS
0201: TSPGVAEVNS NLEGSASSSE FGQALKMLKE QLSIGDEHVN SVDPHYIQPE SLDSLQFLEY SDIDHLAQPT TVYQRPENNK LERCYGGNFG AQYSAKNDSN
0301: KLERCYGGYV GGAEYHSSNL MLVKNGSGPS GGTGGSGDQG SESWKDVLEA CEASIPLNSE GSTPSSAKGL LAGLQEDSNW SYSNQVDQST FLLPQDLGSF
0401: QLPASYSALV APENNGEYCG MMEDGMKIGL PFEQEMRVTG AHNQKFTIQD ISPDWGYANE TTKVIIIGSF LCDPTESTWS CMFGNAQVPF EIIKEGVIRC
0501: EAPQCGPGKV NLCITSGDGL LCSEIREFEY REKPDTCCPK CSEPQTSDMS TSPNELILLV RFVQTLLSDR SSERKSNLES GNDKLLTKLK ADDDQWRHVI
0601: GTIIDGSASS TSTVDWLLQE LLKDKLDTWL SSRSCDEDYI TCSLSKQEQG IIHMVAGLGF EWAFYPILAH GVNVDFRDIK GWSALHWAAQ FGSEKMVAAL
0701: IASGASAGAV TDPSRQDPNG KTAASIAASN GHKGLAGYLS EVALTNHLSS LTLEETENSK DTAQVQTEKT LNSISEQSPS GNEDQVSLKD TLAAVRNAAQ
0801: AAARIQAAFR AHSFRKRKQR EAALVACLQE YGMYCEDIEG ISAMSKLTFG KGRNYNSAAL SIQKNFRGYK DRKCFLELRQ KVVKIQAHVR GYQIRKNYKV
0901: ICWAVRILDK VVLRWRRKGV GLRGFRQDVE STEDSEDEDI LKVFRKQKVD VAVNEAFSRV LSMSNSPEAR QQYHRVLKRY CQTKAELGKT ETLVGEDDDG
1001: LFDIADMEYD TLFSLP
0101: KRDGRAIAEA HERLKVGNAE ALNCYYAHGE QDPTFRRRIY WMLDPEYEHI VLVHYRDVSE REEGQQTGGQ VYQFAPILST QNVSYNQYIG DSSDIYQQSS
0201: TSPGVAEVNS NLEGSASSSE FGQALKMLKE QLSIGDEHVN SVDPHYIQPE SLDSLQFLEY SDIDHLAQPT TVYQRPENNK LERCYGGNFG AQYSAKNDSN
0301: KLERCYGGYV GGAEYHSSNL MLVKNGSGPS GGTGGSGDQG SESWKDVLEA CEASIPLNSE GSTPSSAKGL LAGLQEDSNW SYSNQVDQST FLLPQDLGSF
0401: QLPASYSALV APENNGEYCG MMEDGMKIGL PFEQEMRVTG AHNQKFTIQD ISPDWGYANE TTKVIIIGSF LCDPTESTWS CMFGNAQVPF EIIKEGVIRC
0501: EAPQCGPGKV NLCITSGDGL LCSEIREFEY REKPDTCCPK CSEPQTSDMS TSPNELILLV RFVQTLLSDR SSERKSNLES GNDKLLTKLK ADDDQWRHVI
0601: GTIIDGSASS TSTVDWLLQE LLKDKLDTWL SSRSCDEDYI TCSLSKQEQG IIHMVAGLGF EWAFYPILAH GVNVDFRDIK GWSALHWAAQ FGSEKMVAAL
0701: IASGASAGAV TDPSRQDPNG KTAASIAASN GHKGLAGYLS EVALTNHLSS LTLEETENSK DTAQVQTEKT LNSISEQSPS GNEDQVSLKD TLAAVRNAAQ
0801: AAARIQAAFR AHSFRKRKQR EAALVACLQE YGMYCEDIEG ISAMSKLTFG KGRNYNSAAL SIQKNFRGYK DRKCFLELRQ KVVKIQAHVR GYQIRKNYKV
0901: ICWAVRILDK VVLRWRRKGV GLRGFRQDVE STEDSEDEDI LKVFRKQKVD VAVNEAFSRV LSMSNSPEAR QQYHRVLKRY CQTKAELGKT ETLVGEDDDG
1001: LFDIADMEYD TLFSLP
Arabidopsis Description
CAMTA4Calmodulin-binding transcription activator 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYG2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.