Factsheet for Bra004096.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07431	Canola	nucleus	95.58	96.37
Bra004217.1-P	Field mustard	nucleus	75.13	73.32
Bra034007.1-P	Field mustard	nucleus	75.85	72.92
AT1G67310.1	Thale cress	cytosol	68.65	65.75
VIT_14s0036g00610.t01	Wine grape	plastid	8.53	56.08
GSMUA_AchrUn_...	Banana	cytosol	5.65	53.92
PGSC0003DMT400084738	Potato	cytosol	36.59	52.05
VIT_01s0010g03850.t01	Wine grape	nucleus	50.15	50.41
Solyc05g015650.2.1	Tomato	nucleus	47.79	49.73
KRH58784	Soybean	nucleus	49.85	49.34
KRH42689	Soybean	cytosol	48.72	49.12
Solyc12g035520.1.1	Tomato	nucleus	46.25	46.25
GSMUA_Achr8P00680_001	Banana	mitochondrion	6.58	46.04
Os04t0388500-01	Rice	nucleus	40.9	39.68
OQU81398	Sorghum	nucleus	40.08	39.2
EES01985	Sorghum	nucleus	33.81	38.93
Zm00001d003958_P013	Maize	nucleus	39.05	38.82
TraesCS2B01G300800.2	Wheat	nucleus	40.9	38.72
TraesCS2A01G283800.1	Wheat	nucleus	40.7	38.56
HORVU2Hr1G069950.6	Barley	nucleus	40.49	38.48
Zm00001d009281_P001	Maize	cytosol	7.81	38.38
TraesCS2D01G282800.6	Wheat	nucleus	40.6	38.35
Zm00001d025235_P004	Maize	nucleus	39.26	38.09
TraesCS3D01G426700.5	Wheat	nucleus	30.63	36.43
TraesCS3B01G469100.2	Wheat	cytosol	30.11	36.4
Os01t0923600-02	Rice	nucleus	32.48	35.99
TraesCS3A01G433300.2	Wheat	nucleus	30.11	35.69
Zm00001d042313_P004	Maize	nucleus	32.58	35.54
HORVU3Hr1G094860.7	Barley	cytosol, nucleus, plastid	30.73	35.38
Bra038534.1-P	Field mustard	nucleus	29.8	31.18
Bra030248.1-P	Field mustard	nucleus	30.52	28.81
Bra009382.1-P	Field mustard	nucleus	29.39	28.4
Bra037769.1-P	Field mustard	cytosol	28.98	27.43
Bra022188.1-P	Field mustard	cytosol	23.23	26.59
Bra038040.1-P	Field mustard	nucleus	24.67	26.12
Bra004218.1-P	Field mustard	nucleus	0.31	1.02

Protein Annotations

Gene3D:1.20.5.190	Gene3D:1.25.40.20	MapMan:15.5.26	Gene3D:2.60.40.10	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	EnsemblPlantsGene:Bra004096	EnsemblPlants:Bra004096.1	EnsemblPlants:Bra004096.1-P	InterPro:CG-1_dom	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	InterPro:IPR000048	InterPro:IPR002110	InterPro:IPR005559
InterPro:IPR013783	InterPro:IPR020683	InterPro:IPR036770	InterPro:IPT_dom	InterPro:IQ_motif_EF-hand-BS	InterPro:Ig-like_fold
InterPro:Ig_E-set	UniProt:M4CIR2	InterPro:P-loop_NTPase	PFAM:PF00612	PFAM:PF01833	PFAM:PF03859
PFAM:PF12796	PFscan:PS50088	PFscan:PS50096	PFscan:PS50297	PFscan:PS51437	PANTHER:PTHR23335
PANTHER:PTHR23335:SF1	SMART:SM00015	SMART:SM00248	SMART:SM01076	SUPFAM:SSF48403	SUPFAM:SSF52540
SUPFAM:SSF81296	UniParc:UPI00025413F6	SEG:seg	:	:	:

Description

AT1G67310 (E=1e-212) | calmodulin binding / transcription regulator

Coordinates

chrA07:+:16824046..16828822

Molecular Weight (calculated)

108436.0 Da

IEP (calculated)

5.844

GRAVY (calculated)

-0.579

Length

973 amino acids

Sequence
(BLAST)

001: MQSEYEIRTL NQEAQTRWLK PPEVYFILKN HERYELTHKA PHKPTSGSLC LYNKRVLKFF RKDGHHWRKK RDGRAIAEAH ERLKVGNVEA LNCYYAHGEH
101: DPSFQRRIFW MLDLEYDHIV LVHYRDVSDA KEGKQSSGTV LQFSLKPSTL FSSPSYSHHI GDSSTDIQQQ HSEANSGVVF SSNGGEEGSG SSYEFENREA
201: IKRLEVQLSL GDDNNVVQNE SLDGLQFLDF STDLDHLVPP PATIHQRPES SSKLGRCYGG YVGPQCNVGP PLYSQNQSLD SLLSLEYIKD MNQLAQPEAG
301: QQRQESNRLE RSYGGYIGTE YHPNNLMLVN NGSGGSGGSG ESWKDVLEAC GASIALNSQE DSNWTYINQA DQATLLLPQE LDSSLQLPPP CYSELRAPEN
401: NGYYNTMLDD EGQTGPPLEQ VMNPTVAYNQ KFTIQDISPE WGYANETTKV IIIGSFLCDP TESTWACMFG NAQVPFEIVK EGVIRCQAPP CGPGKVNLCI
501: TSGDGLSCSQ IVEFEYRDKP DDRSSPRSSP DVLLLLVKFV QTLLLDRKGN LEPNTDDDEW RRIIDKIRDG TATSSSTVDW LLQELLKDKL ATWLSSRSQD
601: KDQTSCSLSK QEQGIIHMVA GLGFDWALSP ILGHGVSIDF RDDNGWSALH WAAQLGSEKM VAALIASGAS AGAVTDPNTQ DPVGKTPASI AASNGHKGLA
701: GYLSEVALTN HLSSLTLEET EDSIESARAE AEIAVKSIAG KSHPVNDDPQ SLAALKNAAE AAARIQAAFR AHSFRKRQQR EADMYACLKE YGIYADMSKQ
801: NVRNYHSAAL SIQKKYRGYK GRKEFLTKRQ KAIMIQAHVR GYQTRKQYKV ICWAVGMLDK VILRWRRKGV GLKGFRQDVE SGEDSEDEDI LRVFRKQKVE
901: GAVNEAFSRV MSMTRTPEAR QQYHRVLTTY CKKKAELGKT ETLGIGGSGG GFEDDDALFD IADMEDDHLF SLP

Best Arabidopsis Sequence Match ( AT1G67310.1 )
(BLAST)

0001: MSSVAEDNSF TCDIATIFVA ICRNPPANPS DSLFQYEIST LYQEAHSRWL KPPEVLFILQ NHESLTLTNT APQRPTSGSL LLFNKRVLKF FRKDGHQWRR
0101: KRDGRAIAEA HERLKVGNAE ALNCYYAHGE QDPTFRRRIY WMLDPEYEHI VLVHYRDVSE REEGQQTGGQ VYQFAPILST QNVSYNQYIG DSSDIYQQSS
0201: TSPGVAEVNS NLEGSASSSE FGQALKMLKE QLSIGDEHVN SVDPHYIQPE SLDSLQFLEY SDIDHLAQPT TVYQRPENNK LERCYGGNFG AQYSAKNDSN
0301: KLERCYGGYV GGAEYHSSNL MLVKNGSGPS GGTGGSGDQG SESWKDVLEA CEASIPLNSE GSTPSSAKGL LAGLQEDSNW SYSNQVDQST FLLPQDLGSF
0401: QLPASYSALV APENNGEYCG MMEDGMKIGL PFEQEMRVTG AHNQKFTIQD ISPDWGYANE TTKVIIIGSF LCDPTESTWS CMFGNAQVPF EIIKEGVIRC
0501: EAPQCGPGKV NLCITSGDGL LCSEIREFEY REKPDTCCPK CSEPQTSDMS TSPNELILLV RFVQTLLSDR SSERKSNLES GNDKLLTKLK ADDDQWRHVI
0601: GTIIDGSASS TSTVDWLLQE LLKDKLDTWL SSRSCDEDYI TCSLSKQEQG IIHMVAGLGF EWAFYPILAH GVNVDFRDIK GWSALHWAAQ FGSEKMVAAL
0701: IASGASAGAV TDPSRQDPNG KTAASIAASN GHKGLAGYLS EVALTNHLSS LTLEETENSK DTAQVQTEKT LNSISEQSPS GNEDQVSLKD TLAAVRNAAQ
0801: AAARIQAAFR AHSFRKRKQR EAALVACLQE YGMYCEDIEG ISAMSKLTFG KGRNYNSAAL SIQKNFRGYK DRKCFLELRQ KVVKIQAHVR GYQIRKNYKV
0901: ICWAVRILDK VVLRWRRKGV GLRGFRQDVE STEDSEDEDI LKVFRKQKVD VAVNEAFSRV LSMSNSPEAR QQYHRVLKRY CQTKAELGKT ETLVGEDDDG
1001: LFDIADMEYD TLFSLP

Arabidopsis Description

CAMTA4Calmodulin-binding transcription activator 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYG2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.