Factsheet for VIT_14s0036g00610.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
cytosol 3
extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400084738	Potato	cytosol	62.16	13.45
VIT_01s0010g03850.t01	Wine grape	nucleus	77.7	11.88
KRH58784	Soybean	nucleus	64.86	9.77
KRH42689	Soybean	cytosol	63.51	9.74
AT1G67310.1	Thale cress	cytosol	62.16	9.06
Solyc05g015650.2.1	Tomato	nucleus	56.76	8.98
Solyc12g035520.1.1	Tomato	nucleus	56.76	8.63
CDY07431	Canola	nucleus	56.08	8.6
Bra004096.1-P	Field mustard	nucleus	56.08	8.53
Bra004217.1-P	Field mustard	nucleus	57.43	8.53
CDY28897	Canola	nucleus	56.08	8.5
Bra034007.1-P	Field mustard	nucleus	58.11	8.5
CDY12637	Canola	nucleus	58.11	8.32
CDY51184	Canola	nucleus	57.43	8.29
CDY01799	Canola	nucleus	57.43	8.29
Zm00001d025235_P004	Maize	nucleus	55.41	8.18
Zm00001d003958_P013	Maize	nucleus	54.05	8.17
OQU81398	Sorghum	nucleus	54.73	8.14
Os04t0388500-01	Rice	nucleus	52.7	7.78
HORVU2Hr1G069950.6	Barley	nucleus	52.7	7.62
TraesCS2B01G300800.2	Wheat	nucleus	52.7	7.59
TraesCS2A01G283800.1	Wheat	nucleus	52.03	7.5
TraesCS2D01G282800.6	Wheat	nucleus	52.03	7.48
EES01985	Sorghum	nucleus	39.86	6.98
CDX96099	Canola	nucleus	57.43	6.76
Os01t0923600-02	Rice	nucleus	39.86	6.72
TraesCS3B01G469100.2	Wheat	cytosol	36.49	6.71
HORVU3Hr1G094860.7	Barley	cytosol, nucleus, plastid	37.84	6.63
Zm00001d042313_P004	Maize	nucleus	39.86	6.61
TraesCS3A01G433300.2	Wheat	nucleus	36.49	6.58
TraesCS3D01G426700.5	Wheat	nucleus	35.81	6.48
VIT_05s0020g00630.t01	Wine grape	nucleus	37.16	5.4
VIT_05s0077g01240.t01	Wine grape	cytosol	33.11	5.29
VIT_07s0141g00250.t01	Wine grape	nucleus	41.22	4.51
VIT_00s0805g00010.t01	Wine grape	cytosol, nucleus, plastid	0.0	0.0
GSMUA_AchrUn_...	Banana	cytosol	0.0	0.0
GSMUA_Achr8P00680_001	Banana	mitochondrion	0.0	0.0
Zm00001d009281_P001	Maize	cytosol	0.0	0.0
Bra004218.1-P	Field mustard	nucleus	0.0	0.0

Protein Annotations

MapMan:15.5.26	ProteinID:CCB47654	ProteinID:CCB47654.1	ncoils:Coil	UniProt:F6H615	EMBL:FN595241
GO:GO:0001077	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006366
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0043565	GO:GO:0045944	PANTHER:PTHR23335	PANTHER:PTHR23335:SF1	UniParc:UPI0002108D03	ArrayExpress:VIT_14s0036g00610
EnsemblPlantsGene:VIT_14s0036g00610	EnsemblPlants:VIT_14s0036g00610.t01	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr14:+:10571826..10572463

Molecular Weight (calculated)

15531.1 Da

IEP (calculated)

6.680

GRAVY (calculated)

-0.259

Length

148 amino acids

Sequence
(BLAST)

001: MVVALIASGA SVGAVTDPSP QDPTGKTAAS IASTSGHKEL VGYLSEVVVT SHMSSLMLEE SELSKGSAEV EAEITTNSTS KGSVAASKDQ ISLKDALAAF
101: RNTTQAAARI QAAFHTHSFR RKQQREGCHF VFKDEASTSS LKGKDPDF

Best Arabidopsis Sequence Match ( AT1G67310.1 )
(BLAST)

0001: MSSVAEDNSF TCDIATIFVA ICRNPPANPS DSLFQYEIST LYQEAHSRWL KPPEVLFILQ NHESLTLTNT APQRPTSGSL LLFNKRVLKF FRKDGHQWRR
0101: KRDGRAIAEA HERLKVGNAE ALNCYYAHGE QDPTFRRRIY WMLDPEYEHI VLVHYRDVSE REEGQQTGGQ VYQFAPILST QNVSYNQYIG DSSDIYQQSS
0201: TSPGVAEVNS NLEGSASSSE FGQALKMLKE QLSIGDEHVN SVDPHYIQPE SLDSLQFLEY SDIDHLAQPT TVYQRPENNK LERCYGGNFG AQYSAKNDSN
0301: KLERCYGGYV GGAEYHSSNL MLVKNGSGPS GGTGGSGDQG SESWKDVLEA CEASIPLNSE GSTPSSAKGL LAGLQEDSNW SYSNQVDQST FLLPQDLGSF
0401: QLPASYSALV APENNGEYCG MMEDGMKIGL PFEQEMRVTG AHNQKFTIQD ISPDWGYANE TTKVIIIGSF LCDPTESTWS CMFGNAQVPF EIIKEGVIRC
0501: EAPQCGPGKV NLCITSGDGL LCSEIREFEY REKPDTCCPK CSEPQTSDMS TSPNELILLV RFVQTLLSDR SSERKSNLES GNDKLLTKLK ADDDQWRHVI
0601: GTIIDGSASS TSTVDWLLQE LLKDKLDTWL SSRSCDEDYI TCSLSKQEQG IIHMVAGLGF EWAFYPILAH GVNVDFRDIK GWSALHWAAQ FGSEKMVAAL
0701: IASGASAGAV TDPSRQDPNG KTAASIAASN GHKGLAGYLS EVALTNHLSS LTLEETENSK DTAQVQTEKT LNSISEQSPS GNEDQVSLKD TLAAVRNAAQ
0801: AAARIQAAFR AHSFRKRKQR EAALVACLQE YGMYCEDIEG ISAMSKLTFG KGRNYNSAAL SIQKNFRGYK DRKCFLELRQ KVVKIQAHVR GYQIRKNYKV
0901: ICWAVRILDK VVLRWRRKGV GLRGFRQDVE STEDSEDEDI LKVFRKQKVD VAVNEAFSRV LSMSNSPEAR QQYHRVLKRY CQTKAELGKT ETLVGEDDDG
1001: LFDIADMEYD TLFSLP

Arabidopsis Description

CAMTA4Calmodulin-binding transcription activator 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYG2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.